Vitis vinifera         DUB/USP


※ DUB/USP family introduction

    USP is a family of cysteine peptidases, which belongs to the MEROPS peptidase family C19 (ubiquitin-specific protease family, clan CA). Families within the CA clan are loosely termed papain-like as protein fold of the peptidase unit resembles that of papain, the type example for clan CA. Predicted active site residues for members of this family and family C1 occur in the same order in the sequence: N/Q, C, H. The type example is human ubiquitin-specific protease 14 (1).

1. http://www.ebi.ac.uk/interpro/entry/IPR001394




There are 31 genes.  Reviewed (0 or Unreviewed (31Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Vvi-131600
VIT_19s0140g00200
F6HRG0
UBP15; VIT_19s0140g00200
IUUC-Vvi-131135
VIT_19s0093g00560
D7TR00
UBP25; VIT_19s0093g00560
IUUC-Vvi-131116
VIT_19s0014g03920
F6H2F7
VIT_19s0014g03920
IUUC-Vvi-131726
VIT_19s0014g03900
E0CSU7
VIT_19s0014g03900
IUUC-Vvi-131130
VIT_19s0014g00210
F6H2K2
VIT_19s0014g00210
IUUC-Vvi-130946
VIT_18s0001g07370
A5B0M8
UBP16; VIT_18s0001g07370; VITISV_003549
IUUC-Vvi-131652
VIT_17s0000g05500
F6GTB6
VIT_17s0000g05500
IUUC-Vvi-131050
VIT_14s0066g02490
F6HV75
VIT_14s0066g02490
IUUC-Vvi-130882
VIT_13s0073g00610
D7T3A6
VIT_13s0073g00610
IUUC-Vvi-131366
VIT_13s0019g01690
D7SQ20
UBP24; VIT_13s0019g01690
IUUC-Vvi-131352
VIT_11s0118g00290
F6HCG8
VIT_11s0118g00290
IUUC-Vvi-131481
VIT_11s0118g00280
F6HCG7
VIT_11s0118g00280
IUUC-Vvi-131391
VIT_09s0070g00500
F6I3D4
VIT_09s0070g00500
IUUC-Vvi-131037
VIT_09s0002g02500
D7U032
VIT_09s0002g02500
IUUC-Vvi-131454
VIT_08s0032g01090
F6I3K3
VIT_08s0032g01090
IUUC-Vvi-131308
VIT_08s0032g00600
D7U8M2
VIT_08s0032g00600
IUUC-Vvi-131371
VIT_07s0141g00230
F6HWM1
VIT_07s0141g00230
IUUC-Vvi-131177
VIT_07s0031g01880
D7SW90
UBP27; VIT_07s0031g01880
IUUC-Vvi-131048
VIT_06s0009g00960
D7T1M3
VIT_06s0009g00960
IUUC-Vvi-131066
VIT_06s0009g00890
F6HAA6
UBP8; VIT_06s0009g00890
IUUC-Vvi-131230
VIT_05s0029g00210
F6GWF8
VIT_05s0029g00210
IUUC-Vvi-130927
VIT_04s0069g00760
F6H9H5
VIT_04s0069g00760
IUUC-Vvi-131477
VIT_04s0008g06860
F6H350
UBP22; VIT_04s0008g06860
IUUC-Vvi-131353
VIT_04s0008g03170
F6H2X7
UBP26; VIT_04s0008g03170
IUUC-Vvi-131010
VIT_02s0025g02760
D7TVT0
VIT_02s0025g02760
IUUC-Vvi-131459
VIT_02s0012g01340
F6HT89
VIT_02s0012g01340
IUUC-Vvi-130938
VIT_00s2562g00020
D7TGH8
VIT_00s2562g00020
IUUC-Vvi-131665
VIT_00s0407g00030
F6HWB7
VIT_00s0407g00030
IUUC-Vvi-131703
VIT_00s0199g00030
F6GZ50
VIT_00s0199g00030
IUUC-Vvi-131535
VIT_00s0174g00260
F6I1Y1
VIT_00s0174g00260
IUUC-Vvi-131005
VIT_00s0174g00150
D7U6B4
UBP5; VIT_00s0174g00150