Populus trichocarpa         E1


※ E1 family introduction

    E1, also known as an ubiquitin-activating enzyme, catalyzes the first step in the ubiquitination reaction. In addition to E1s of ubiquitination, E1s also represents E1s of ubiquitin-like modification (1). At the start of the conjugation cascade, the E1 enzyme binds ATP-Mg2+ and ubiquitin or ubiquitin-like, and catalyses ubiquitin or ubiquitin-like C-terminal acyl adenylation. In the next step a catalytic cysteine on the E1 enzyme attacks the ubiquitin-AMP or ubiquitin-like-AMP complex through acyl substitution, simultaneously creating a thioester bond and an AMP leaving group. Finally, the E1~ubiquitin or E1~ubiquitin-like complex transfers ubiquitin or ubiquitin-like to an E2 enzyme, respectively. This pathway repeats itself until the target protein has a full chain of ubiquitin or ubiquitin-like attached to itself (2).

1. http://en.wikipedia.org/wiki/Ubiquitin-activating_enzyme

2. Schulman, B.A. and Harper, J.W. (2009) Ubiquitin-like protein activation by E1 enzymes: the apex for downstream signalling pathways. Nat. Rev. Mol. Cell Biol., 10, 319-331. PMID: 19352404




There are 13 genes.  Reviewed (0 or Unreviewed (13Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pop-099424
POPTR_0015s11110
B9IFE2
POPTRDRAFT_575384; POPTR_0015s11110g
IUUC-Pop-099049
POPTR_0015s10840
B9IFB7
POPTRDRAFT_733616; POPTR_0015s10840g
IUUC-Pop-099871
POPTR_0014s15180
B9IAF6
POPTRDRAFT_807616; POPTR_0014s15180g
IUUC-Pop-099145
POPTR_0012s10270
B9I3U4
POPTRDRAFT_823422; POPTR_0012s10270g
IUUC-Pop-099722
POPTR_0012s06310
U5FWS8
POPTRDRAFT_552785; POPTR_0012s06310g
IUUC-Pop-099470
POPTR_0010s03520
B9HY52
POPTRDRAFT_768711; POPTR_0010s03520g
IUUC-Pop-100079
POPTR_0009s12300
B9HRJ6
POPTRDRAFT_767403; POPTR_0009s12300g
IUUC-Pop-099577
POPTR_0009s07960
B9HNA9
POPTRDRAFT_557633; POPTR_0009s07960g
IUUC-Pop-098934
POPTR_0009s07950
B9HNB1
POPTRDRAFT_722610; POPTR_0009s07950g
IUUC-Pop-099914
POPTR_0008s20850
B9HMN4
POPTRDRAFT_803920; POPTR_0008s20850g
IUUC-Pop-099703
POPTR_0004s16630
B9H0U6
POPTR_0004s166302g
IUUC-Pop-099702
POPTR_0004s05470
B9H2J2
POPTRDRAFT_1075310; POPTR_0004s05470g
IUUC-Pop-099550
POPTR_0001s28750
B9GGR5
POPTRDRAFT_815464; POPTR_0001s28750g