Arabidopsis lyrata         E3 activity/HECT


※ E3 activity/HECT family introduction

    The HECT ligases are a major group of E3 enzymes which contain the HECT (Homologous to the E6-AP Carboxyl Terminus) domain of ~350 AA at the C-terminus (1). HECT domain is a bifunctional, which binds the E2 enzyme through its N-terminal region while forms the thioester complexes with ubiquitin though the C-terminal cysteine (2). The ubiquitination is catalyzed by directly transferring the ubiquitin to the targeted substrates, which is binded with the N-terminal domain of the HECT ligases. Although the C-terminal cysteines and the HECT domains are conserved in the HECT ligases, the N-terminal domains of the HECT ligases are various, which determine its diversity of the substrate specificity. Furthermore, based on various N-terminal domain, the HECT ligases could be divided into 3 groups of Nedd4, HERC and others. The HECT ligases are involved in various cellular and physiological processes such as mitochondrial inheritance, chromatin remodeling, regulation of transcription, tumorigenesis (2).

1. http://pfam.sanger.ac.uk/family/PF01388

2. Rotin, D. and S. Kumar (2009). Physiological functions of the HECT family of ubiquitin ligases. Nat. Rev. Mol. Cell Biol., 10(6): 398-409. PMID: 19436320




There are 11 genes.  Reviewed (0 or Unreviewed (11Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Aly-005962
scaffold_700052.1
D7MFL6
KAK; ARALYDRAFT_912310
IUUC-Aly-006545
scaffold_601268.1
D7M4I7
ARALYDRAFT_909211
IUUC-Aly-005880
scaffold_600865.1
D7M1D1
ARALYDRAFT_908808
IUUC-Aly-005570
fgenesh2_kg.6__3192__AT4G12570.1
D7M129
UPL5; ARALYDRAFT_490058
IUUC-Aly-006493
fgenesh2_kg.6__201__AT5G02880.1
D7M7X1
UPL4; ARALYDRAFT_487067
IUUC-Aly-005794
fgenesh2_kg.5__1676__AT3G53090.1
D7LUE6
UPL7; ARALYDRAFT_485684
IUUC-Aly-006441
fgenesh2_kg.5__1123__AT3G47660.1
D7LRE3
ARALYDRAFT_485131
IUUC-Aly-005768
fgenesh2_kg.3__1892__AT3G17205.1
D7L6Q0
UPL6; ARALYDRAFT_479191
IUUC-Aly-006083
fgenesh2_kg.1__4605__AT1G55860.1
D7KN29
UPL1; ARALYDRAFT_474651
IUUC-Aly-006157
Al_scaffold_0008_1303
D7MPD6
ARALYDRAFT_684483
IUUC-Aly-006520
Al_scaffold_0001_5275
D7KC86
ARALYDRAFT_682952