Populus trichocarpa         E3 activity/HECT


※ E3 activity/HECT family introduction

    The HECT ligases are a major group of E3 enzymes which contain the HECT (Homologous to the E6-AP Carboxyl Terminus) domain of ~350 AA at the C-terminus (1). HECT domain is a bifunctional, which binds the E2 enzyme through its N-terminal region while forms the thioester complexes with ubiquitin though the C-terminal cysteine (2). The ubiquitination is catalyzed by directly transferring the ubiquitin to the targeted substrates, which is binded with the N-terminal domain of the HECT ligases. Although the C-terminal cysteines and the HECT domains are conserved in the HECT ligases, the N-terminal domains of the HECT ligases are various, which determine its diversity of the substrate specificity. Furthermore, based on various N-terminal domain, the HECT ligases could be divided into 3 groups of Nedd4, HERC and others. The HECT ligases are involved in various cellular and physiological processes such as mitochondrial inheritance, chromatin remodeling, regulation of transcription, tumorigenesis (2).

1. http://pfam.sanger.ac.uk/family/PF01388

2. Rotin, D. and S. Kumar (2009). Physiological functions of the HECT family of ubiquitin ligases. Nat. Rev. Mol. Cell Biol., 10(6): 398-409. PMID: 19436320




There are 14 genes.  Reviewed (0 or Unreviewed (14Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pop-099058
POPTR_0016s10990
B9IFS8
POPTR_0016s10980g
IUUC-Pop-099842
POPTR_0016s10980
IUUC-Pop-100082
POPTR_0016s08640
B9IIZ8
POPTRDRAFT_256737; POPTR_0016s08640g
IUUC-Pop-100027
POPTR_0016s01430
B9IH77
POPTRDRAFT_254784; POPTR_0016s01430g
IUUC-Pop-099520
POPTR_0011s09640
U5G1U7
POPTR_0011s09640g
IUUC-Pop-098928
POPTR_0010s15980
B9HX63
POPTRDRAFT_882424; POPTR_0010s15980g
IUUC-Pop-099190
POPTR_0009s13670
B9HR64
POPTRDRAFT_721709; POPTR_0009s13670g
IUUC-Pop-099121
POPTR_0009s07610
B9HNF1
POPTRDRAFT_1087666; POPTR_0009s07610g
IUUC-Pop-099574
POPTR_0008s10070
B9HIK0
POPTRDRAFT_421442; POPTR_0008s10070g
IUUC-Pop-099725
POPTR_0006s13410
U5G6X6
POPTRDRAFT_739328; POPTR_0006s13410g
IUUC-Pop-099556
POPTR_0006s01330
B9HCS3
POPTRDRAFT_761803; POPTR_0006s01330g
IUUC-Pop-099541
POPTR_0004s18060
B9H194
POPTRDRAFT_648784; POPTR_0004s18060g
IUUC-Pop-099468
POPTR_0002s11110
B9GN81
POPTRDRAFT_830264; POPTR_0002s11110g
IUUC-Pop-099613
POPTR_0001s37730
U5GW41
POPTR_0001s37730g