Setaria italica         E3 activity/HECT


※ E3 activity/HECT family introduction

    The HECT ligases are a major group of E3 enzymes which contain the HECT (Homologous to the E6-AP Carboxyl Terminus) domain of ~350 AA at the C-terminus (1). HECT domain is a bifunctional, which binds the E2 enzyme through its N-terminal region while forms the thioester complexes with ubiquitin though the C-terminal cysteine (2). The ubiquitination is catalyzed by directly transferring the ubiquitin to the targeted substrates, which is binded with the N-terminal domain of the HECT ligases. Although the C-terminal cysteines and the HECT domains are conserved in the HECT ligases, the N-terminal domains of the HECT ligases are various, which determine its diversity of the substrate specificity. Furthermore, based on various N-terminal domain, the HECT ligases could be divided into 3 groups of Nedd4, HERC and others. The HECT ligases are involved in various cellular and physiological processes such as mitochondrial inheritance, chromatin remodeling, regulation of transcription, tumorigenesis (2).

1. http://pfam.sanger.ac.uk/family/PF01388

2. Rotin, D. and S. Kumar (2009). Physiological functions of the HECT family of ubiquitin ligases. Nat. Rev. Mol. Cell Biol., 10(6): 398-409. PMID: 19436320




There are 13 genes.  Reviewed (0 or Unreviewed (13Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Sit-109811
Si034011m.g
K4A557
LOC101753909; SETIT_034011mg
IUUC-Sit-110651
Si028891m.g
K3ZQL1
LOC101752768; SETIT_028891mg
IUUC-Sit-110149
Si028637m.g
K3ZPV7
SETIT_028637mg
IUUC-Sit-109917
Si025120m.g
K3ZEX2
LOC101771832; SETIT_025120mg
IUUC-Sit-110218
Si024055m.g
K3ZBY2
SETIT_024055mg
IUUC-Sit-110332
Si020966m.g
K3Z348
LOC101774848; SETIT_020966mg
IUUC-Sit-110598
Si020939m.g
K3Z321
LOC101778904; SETIT_020939mg
IUUC-Sit-110717
Si016079m.g
K3YP87
LOC101758275; SETIT_016079mg
IUUC-Sit-110394
Si013562m.g
K3YH44
LOC101772615; SETIT_013562mg
IUUC-Sit-110632
Si013264m.g
K3YG96
LOC101772209; SETIT_013264mg
IUUC-Sit-110415
Si010123m.g
K3Y7D2
LOC101772083; SETIT_010123mg
IUUC-Sit-110457
Si009242m.g
K3Y4V4
LOC101760896; SETIT_009242mg
IUUC-Sit-109757
Si009164m.g
K3Y4M6
LOC101771552; SETIT_009164mg