Astyanax mexicanus         E3 activity/RBR


※ E3 activity/RBR family introduction

    The RBR family of E3 ligases has a distinctive organisation of RING fingers called 'RING-betweenRING-RING' (RBR), characterised by two RING fingers with a cysteine-rich region called the 'in-between-RING' domain that separates them (1, 2, 3). The domains in the RBR E3 ligases have been further named as RING1-BRcat-Rcat according to their structure and function: the C-terminal Rcat (required-for-catalysis) domain is essential for catalytic activity, whereas the central BRcat (benign-catalytic) domain adopts the same fold as the Rcat, but lacks a catalytic cysteine residue and ubiquitination activity (4). These ligases have a unique mechanism of elongating ubiquitin chains that distinguishes them from other E3 ligases.

1. http://www.ebi.ac.uk/interpro/entry/IPR031127

2. Marín et al., 2004. Parkin and relatives: the RBR family of ubiquitin ligases. Physiol Genomics., 17(3):253-63. PMID: 15152079

3. Marín, 2009. RBR ubiquitin ligases: Diversification and streamlining in animal lineages. J Mol Evol., 69(1):54-64. PMID: 19526189

4. Spratt et al., 2014. RBR E3 ubiquitin ligases: new structures, new insights, new questions. Biochem J., 458(3):421-37. PMID: 24576094




There are 6 genes.  Reviewed (0 or Unreviewed (5Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ame-011264
ENSAMXG00000003281.1
W5K710
arih1
IUUC-Ame-011312
ENSAMXG00000020091.1
W5LLI3
rnf14
IUUC-Ame-011379
ENSAMXG00000010094.1
W5KS09
rnf216
IUUC-Ame-011434
ENSAMXG00000008586.1
W5KMK9
rnf19a
IUUC-Ame-011008
ENSAMXG00000004941.1
W5KBV4
rbck1
IUUC-Ame-011813
ENSAMXG00000002823.1
W5K5M4
rnf19b