Arabidopsis thaliana         E3 activity/RING/PHD


※ E3 activity/RING/PHD family introduction

    The plant homeodomain (PHD) zinc finger domain has a C4HC3-type motif, and is widely distributed in eukaryotes, being found in many chromatin regulatory factors (1).PHD is thought to be involved in chromatin-mediated transcriptional regulation (2). The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger.

1. http://pfam.xfam.org/family/PF00628

2. Rein Aasland, Toby J. Gibson, A.Francis Stewart (1995). The PHD finger: Implications for chromatin-mediated transcriptional regulation. Trends in Biochemical Sciences., 20(2):56-59. PMID:77015622




There are 28 genes.  Reviewed (1 or Unreviewed (27Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ath-007617
AT5G60410
Q680Q4
SIZ1; At5g60410; MUF9.5; MUF9.70
IUUC-Ath-006839
AT5G63900
Q9FMZ9
MGI19.10; MGI19_10; At5g63900
IUUC-Ath-007426
AT5G55390
F4K3G5
EDM2; At5g55390; MTE17.10
IUUC-Ath-007406
AT5G44800
F4KBP5
CHR4; PKR1; At5g44800; K23L20_15; T19K24.8
IUUC-Ath-007130
AT5G35210
F4JYC8
PTM; DDP1; At5g35210; K3D20.8
IUUC-Ath-007124
AT5G22760
F4KBB1
MDJ22.18; MDJ22_18; At5g22760
IUUC-Ath-007340
AT5G01480
Q9M026
T10O8_190; At5g01480; F7A7.1
IUUC-Ath-006906
AT4G39100
Q9FEN9
SHL; SHL1; At4g39100; F19H22.200
IUUC-Ath-007631
AT4G22140
F4JL28
EBS; At4g22140; F1N20.240
IUUC-Ath-007442
AT4G14700
Q710E8
ORC1A; At4g14700; dl3390w; FCAALL.93
IUUC-Ath-006910
AT4G12620
Q9SU24
ORC1B; UNE13; At4g12620; T1P17.210
IUUC-Ath-006690
AT3G61740
Q9M364
ATX3; SDG14; SET14; At3g61740; F15G16.130
IUUC-Ath-006659
AT3G53680
A0A1I9LNX5
At3g53680
IUUC-Ath-007609
AT3G52100
F4J5R1
At3g52100
IUUC-Ath-007352
AT3G46800
Q9STF4
T6H20.170; At3g46800
IUUC-Ath-006765
AT3G24010
Q9LIQ6
ING1; At3g24010; F14O13.20
IUUC-Ath-006656
AT3G14980
F4IXE7
IDM1; ROS4; At3g14980; K15M2.12
IUUC-Ath-007326
AT3G13590
F4JDE3
At3g13590
IUUC-Ath-007307
AT3G08020
Q0WKW1
At3g08020
IUUC-Ath-007218
AT3G01460
Q9SGH2
MBD9; At3g01460; F4P13.1; T13O15.10
IUUC-Ath-007521
AT2G37520
F4IQY0
At2g37520; F13M22.2; F13M22_2
IUUC-Ath-007103
AT2G36720
Q8RWG0
At2g36720; F13K3.12; F13K3_12
IUUC-Ath-006755
AT2G21850
F4III1
At2g21850; F7D8.17; F7D8_17
IUUC-Ath-007032
AT2G02690
F4IR95
At2g02690
IUUC-Ath-007678
AT2G02680
Q8S8R6
At2g02680; T8K22.2; T8K22_2
IUUC-Ath-007282
AT1G77250
Q1JPM3
At1g77250; T14N5.11; T14N5_11
IUUC-Ath-006578
AT1G54390
B3H615
ING2; At1g54390; F20D21.22
IUUC-Ath-007447
AT1G14510
Q8LA16
AL7; At1g14510; F14L17.29; T5E21.1