Vitis vinifera         E3 activity/RING/PHD


※ E3 activity/RING/PHD family introduction

    The plant homeodomain (PHD) zinc finger domain has a C4HC3-type motif, and is widely distributed in eukaryotes, being found in many chromatin regulatory factors (1).PHD is thought to be involved in chromatin-mediated transcriptional regulation (2). The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger.

1. http://pfam.xfam.org/family/PF00628

2. Rein Aasland, Toby J. Gibson, A.Francis Stewart (1995). The PHD finger: Implications for chromatin-mediated transcriptional regulation. Trends in Biochemical Sciences., 20(2):56-59. PMID:77015622




There are 27 genes.  Reviewed (0 or Unreviewed (27Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Vvi-130865
VIT_19s0014g01500
F6H2P6
VIT_19s0014g01500
IUUC-Vvi-130984
VIT_18s0001g01580
F6H0H1
VIT_18s0001g01580
IUUC-Vvi-131714
VIT_16s0098g01510
E0CV79
ATXR6; VIT_16s0098g01510
IUUC-Vvi-130873
VIT_16s0098g00350
F6H7C9
VIT_16s0098g00350
IUUC-Vvi-130889
VIT_15s0046g00760
F6I6C8
SDG14; VIT_15s0046g00760
IUUC-Vvi-130929
VIT_14s0066g01450
F6HV03
VIT_14s0066g01450
IUUC-Vvi-131738
VIT_13s0067g01000
A5BFH5
VIT_13s0067g01000; VITISV_024922
IUUC-Vvi-131236
VIT_13s0064g00630
D7T335
VIT_13s0064g00630
IUUC-Vvi-131614
VIT_12s0059g01180
D7TEC6
VIT_12s0059g01180
IUUC-Vvi-131388
VIT_12s0035g01980
D7TGJ9
VIT_12s0035g01980
IUUC-Vvi-131739
VIT_11s0016g01500
D7TCI6
VIT_11s0016g01500
IUUC-Vvi-130848
VIT_09s0002g01600
D7TZV3
VIT_09s0002g01600
IUUC-Vvi-130845
VIT_08s0105g00360
F6H6T3
VIT_08s0105g00360
IUUC-Vvi-131745
VIT_08s0040g03340
F6HQU6
VIT_08s0040g03340
IUUC-Vvi-131583
VIT_08s0007g07500
D7TI56
ING2; VIT_08s0007g07500
IUUC-Vvi-131561
VIT_06s0061g00840
D7SN93
VIT_06s0061g00840
IUUC-Vvi-131573
VIT_06s0061g00830
F6GW78
VIT_06s0061g00830
IUUC-Vvi-131129
VIT_06s0009g03800
F6HA06
VIT_06s0009g03800
IUUC-Vvi-130916
VIT_06s0004g06810
F6GUQ3
VIT_06s0004g06810
IUUC-Vvi-130915
VIT_06s0004g02050
F6GU49
VIT_06s0004g02050
IUUC-Vvi-131476
VIT_05s0124g00250
F6I3S0
VIT_05s0124g00250
IUUC-Vvi-131487
VIT_05s0051g00350
D7TS58
ING1; VIT_05s0051g00350
IUUC-Vvi-130849
VIT_04s0008g05880
F6H3J1
VIT_04s0008g05880
IUUC-Vvi-130954
VIT_04s0008g03300
F6H3D1
VIT_04s0008g03300
IUUC-Vvi-131074
VIT_03s0038g00160
D7U5K6
SHL1; VIT_03s0038g00160
IUUC-Vvi-131071
VIT_02s0025g03560
F6HUC9
VIT_02s0025g03560
IUUC-Vvi-131405
VIT_01s0026g00150
F6HPN6
VIT_01s0026g00150