Populus trichocarpa         E3 activity/RING/U-box


※ E3 activity/RING/U-box family introduction

    The U-box is a protein domain with about 70 amino acids. Although the U-box domain is similar with the RING domain, the zinc-binding sites in the RING domain are replaced by conserved charged and polar residues to maintain structure and activity (1). Previously, the U-box protein was considered as a ubiquitin chain assembly factor to catalyze the formation of a ubiquitin chain on ubiquitinated substrates, while recent studies showed that it could mediate polyubiquitylation in the absence of a HECT type or RING-finger type E3. Although the understanding of the detailed mechanisms and functions of the U-box proteins are still limited, it is proposed that they are involved in various biological processes such as the cellular stress response to the intracellular accumulation of abnormal proteins (2).

1. http://www.ebi.ac.uk/interpro/entry/IPR003613

2. Hatakeyama, S. and K. I. Nakayama (2003) U-box proteins as a new family of ubiquitin ligases. Biochem. Biophys. Res. Commun., 302(4): 635-45. PMID: 12646216




There are 116 genes.  Reviewed (0 or Unreviewed (116Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pop-099941
POPTR_0497s00200
U7E0Y8
POPTRDRAFT_768347; POPTR_0497s00200g
IUUC-Pop-099412
POPTR_0019s13210
B9N2C6
POPTRDRAFT_827710; POPTR_0019s13210g
IUUC-Pop-099896
POPTR_0019s08650
B9IQ60
POPTRDRAFT_1108254; POPTR_0019s08650g
IUUC-Pop-099087
POPTR_0019s04500
U5FGD0
POPTRDRAFT_786716; POPTR_0019s04500g
IUUC-Pop-099122
POPTR_0018s09040
B9ILQ0
POPTRDRAFT_578493; POPTR_0018s09040g
IUUC-Pop-100005
POPTR_0017s12530
B9IK34
POPTRDRAFT_577702; POPTR_0017s12530g
IUUC-Pop-098866
POPTR_0017s10990
B9IJN8
POPTRDRAFT_909080; POPTR_0017s10990g
IUUC-Pop-099312
POPTR_0017s02470
U5FLQ4
POPTRDRAFT_851637; POPTR_0017s02470g
IUUC-Pop-100010
POPTR_0016s14150
B9IGQ8
POPTRDRAFT_254319; POPTR_0016s14150g
IUUC-Pop-099498
POPTR_0016s07020
B9IIL0
POPTRDRAFT_576498; POPTR_0016s07020g
IUUC-Pop-099765
POPTR_0016s07010
B9IIK9
POPTRDRAFT_777330; POPTR_0016s07010g
IUUC-Pop-099797
POPTR_0016s05880
B9IIA0
POPTRDRAFT_735061; POPTR_0016s05880g
IUUC-Pop-099905
POPTR_0016s05870
A9PDI2
POPTRDRAFT_667490; POPTR_0016s05870g
IUUC-Pop-099141
POPTR_0016s03330
B9IHN1
POPTR_0016s03330g
IUUC-Pop-098999
POPTR_0015s08550
B9IEP9
POPTRDRAFT_666450; POPTR_0015s08550g
IUUC-Pop-099467
POPTR_0015s08250
B9IEL8
POPTRDRAFT_902475; POPTR_0015s08250g
IUUC-Pop-099112
POPTR_0015s05380
B9N385
POPTRDRAFT_810900; POPTR_0015s05380g
IUUC-Pop-099319
POPTR_0014s15740
B9IAK9
POPTRDRAFT_807645; POPTR_0014s15740g
IUUC-Pop-099211
POPTR_0014s09750
B9I913
POPTRDRAFT_572430; POPTR_0014s04880g
IUUC-Pop-099985
POPTR_0014s09660
B9I903
POPTRDRAFT_807392; POPTR_0014s09660g
IUUC-Pop-098984
POPTR_0014s08090
B9I8K3
POPTRDRAFT_572264; POPTR_0014s08090g
IUUC-Pop-099928
POPTR_0014s08070
B9I8K1
POPTR_0014s08060g
IUUC-Pop-099017
POPTR_0014s03990
B9MVF3
POPTRDRAFT_591840; POPTR_0014s03990g
IUUC-Pop-099452
POPTR_0014s01460
B9IBP7
POPTRDRAFT_774148; POPTR_0014s01460g
IUUC-Pop-099799
POPTR_0013s13580
U5FVY0
POPTRDRAFT_837239; POPTR_0013s13580g
IUUC-Pop-099536
POPTR_0013s04930
B9I5T2
POPTRDRAFT_896086; POPTR_0013s04930g
IUUC-Pop-099920
POPTR_0013s04900
U5FRM2
POPTRDRAFT_937123; POPTR_0013s04900g
IUUC-Pop-099003
POPTR_0012s13020
B9I476
POPTRDRAFT_773342; POPTR_0012s13020g
IUUC-Pop-099290
POPTR_0012s08030
B9I385
POPTRDRAFT_672873; POPTR_0012s08030g
IUUC-Pop-099183
POPTR_0012s07790
B9I357
POPTRDRAFT_423381; POPTR_0012s07790g
IUUC-Pop-099237
POPTR_0012s03960
B9I4T7
POPTRDRAFT_772246; POPTR_0012s03960g
IUUC-Pop-098798
POPTR_0012s02680
B9I201
POPTRDRAFT_422075; POPTR_0012s02680g
IUUC-Pop-099239
POPTR_0011s06840
B9I1H0
POPTRDRAFT_235193; POPTR_0011s06840g
IUUC-Pop-099091
POPTR_0011s05150
A9PCH2
POPTRDRAFT_743801
IUUC-Pop-099846
POPTR_0011s03580
B9HYS7
POPTRDRAFT_568369; POPTR_0011s03580g
IUUC-Pop-098912
POPTR_0010s23330
B9HUI8
POPTRDRAFT_567650; POPTR_0010s23330g
IUUC-Pop-099478
POPTR_0010s19330
B9HSL2
POPTRDRAFT_770185; POPTR_0010s19330g
IUUC-Pop-099410
POPTR_0010s17820
B9HY26
POPTRDRAFT_226499; POPTR_0010s17820g
IUUC-Pop-099123
POPTR_0010s14630
B9HWT2
POPTR_0010s14630g
IUUC-Pop-099907
POPTR_0010s12410
B9HW77
POPTRDRAFT_658791; POPTR_0010s12410g
IUUC-Pop-099485
POPTR_0010s11370
U5G452
POPTR_0010s11370g
IUUC-Pop-100009
POPTR_0010s08980
B9HUP7
POPTR_0010s08980g
IUUC-Pop-099347
POPTR_0010s07660
B9HST8
POPTRDRAFT_565819; POPTR_0010s07660g
IUUC-Pop-100088
POPTR_0010s06810
B9HT95
POPTRDRAFT_726064; POPTR_0010s06810g
IUUC-Pop-100078
POPTR_0009s16740
B9HPY8
POPTRDRAFT_199763; POPTR_0009s16740g
IUUC-Pop-100012
POPTR_0009s10310
A9PAR6
POPTRDRAFT_557402
IUUC-Pop-099101
POPTR_0009s03570
B9HPH8
POPTRDRAFT_1088417; POPTR_0009s03570g
IUUC-Pop-098809
POPTR_0009s03500
B9HPI5
POPTRDRAFT_723298; POPTR_0009s03500g
IUUC-Pop-100008
POPTR_0009s02150
U5G5Q8
POPTR_0009s021501g
IUUC-Pop-099198
POPTR_0009s02140
B9HQ77
POPTRDRAFT_558224; POPTR_0009s02140g
IUUC-Pop-098846
POPTR_0008s17710
B9HL82
POPTRDRAFT_803799; POPTR_0008s17710g
IUUC-Pop-099854
POPTR_0008s17140
B9HKU6
POPTRDRAFT_820827; POPTR_0008s17140g
IUUC-Pop-099887
POPTR_0008s13700
U5G5Q7
POPTR_0008s13700g
IUUC-Pop-099289
POPTR_0008s12760
B9HJA0
POPTRDRAFT_419106; POPTR_0008s12760g
IUUC-Pop-099505
POPTR_0008s11210
B9HIV6
POPTRDRAFT_803522; POPTR_0008s11210g
IUUC-Pop-098818
POPTR_0008s07160
B9HHT7
POPTRDRAFT_564063; POPTR_0008s07160g
IUUC-Pop-099229
POPTR_0008s03560
B9HLH5
POPTRDRAFT_765257; POPTR_0008s03560g
IUUC-Pop-099330
POPTR_0007s14220
B9HFM3
POPTRDRAFT_802999; POPTR_0007s14220g
IUUC-Pop-099657
POPTR_0007s13010
B9HF16
POPTRDRAFT_802937; POPTR_0007s13010g
IUUC-Pop-099595
POPTR_0007s12280
B9HEM7
POPTRDRAFT_719424; POPTR_0007s12280g
IUUC-Pop-099451
POPTR_0007s10280
U5GAH5
POPTRDRAFT_278332; POPTR_0007s10280g
IUUC-Pop-099942
POPTR_0007s04220
U5G7B5
POPTR_0007s04220g
IUUC-Pop-099916
POPTR_0007s03730
B9HEI4
POPTR_0007s03730g
IUUC-Pop-098874
POPTR_0006s29240
B9N6C1
POPTRDRAFT_583182; POPTR_0006s29240g
IUUC-Pop-098861
POPTR_0006s21920
B9H9K6
POPTR_0006s21920g
IUUC-Pop-099305
POPTR_0006s21910
B9P691
POPTRDRAFT_561154; POPTR_0006s21910g
IUUC-Pop-099819
POPTR_0006s20810
B9HAA9
POPTRDRAFT_802150; POPTR_0006s20810g
IUUC-Pop-099946
POPTR_0006s14900
B9HDX1
POPTRDRAFT_416643; POPTR_0006s14900g
IUUC-Pop-099292
POPTR_0006s10810
B9HDH9
POPTRDRAFT_867268; POPTR_0006s10810g
IUUC-Pop-099584
POPTR_0005s27480
B9H5J8
POPTRDRAFT_559967; POPTR_0005s27480g
IUUC-Pop-099630
POPTR_0005s26160
B9H4Y5
POPTRDRAFT_559838; POPTR_0005s26160g
IUUC-Pop-099830
POPTR_0005s24970
B9H4C0
POPTRDRAFT_559734; POPTR_0005s24970g
IUUC-Pop-099351
POPTR_0005s24700
B9H8N4
POPTRDRAFT_801479; POPTR_0005s24700g
IUUC-Pop-099414
POPTR_0005s21210
B9H7Q2
POPTRDRAFT_559352; POPTR_0005s21210g
IUUC-Pop-099430
POPTR_0005s20930
U5GIZ9
POPTR_0005s20930g
IUUC-Pop-099316
POPTR_0005s19290
B9H6Q8
POPTRDRAFT_209043; POPTR_0005s19290g
IUUC-Pop-099220
POPTR_0005s18820
B9H6L5
POPTR_0005s18820g
IUUC-Pop-098988
POPTR_0005s12910
U5GC15
POPTR_0005s12910g
IUUC-Pop-098901
POPTR_0005s12380
U5GHQ7
POPTRDRAFT_593926; POPTR_0005s12380g
IUUC-Pop-099758
POPTR_0005s06470
U5GB68
POPTR_0005s06470g
IUUC-Pop-100093
POPTR_0005s05880
B9MZA3
POPTRDRAFT_782680; POPTR_0005s05880g
IUUC-Pop-100071
POPTR_0004s24130
U5GL34
POPTRDRAFT_681117; POPTR_0004s24130g
IUUC-Pop-099081
POPTR_0004s21490
U5GKB9
POPTRDRAFT_293891; POPTR_0004s21490g
IUUC-Pop-099142
POPTR_0004s14720
B9N4Z3
POPTRDRAFT_581523; POPTR_0004s14720g
IUUC-Pop-098797
POPTR_0004s12060
U5GF31
POPTRDRAFT_791108; POPTR_0004s12060g
IUUC-Pop-099425
POPTR_0004s08220
B9H3D3
POPTRDRAFT_556001; POPTR_0004s08220g
IUUC-Pop-099562
POPTR_0004s06040
B9H2E3
POPTRDRAFT_197539; POPTR_0004s06040g
IUUC-Pop-100028
POPTR_0004s02840
B9H1W1
POPTRDRAFT_555437; POPTR_0004s02840g
IUUC-Pop-098788
POPTR_0004s00430
U5GDX6
POPTR_0004s00430g
IUUC-Pop-099189
POPTR_0003s21700
B9GYK6
POPTRDRAFT_758350; POPTR_0003s21700g
IUUC-Pop-099561
POPTR_0003s16080
B9GZ20
POPTRDRAFT_817505; POPTR_0003s16080g
IUUC-Pop-099196
POPTR_0003s15930
B9GYU9
POPTRDRAFT_757797; POPTR_0003s15930g
IUUC-Pop-099598
POPTR_0003s07640
B9GYD1
POPTRDRAFT_757043; POPTR_0003s07640g
IUUC-Pop-098805
POPTR_0002s25010
B9GQP1
POPTRDRAFT_830590; POPTR_0002s25020g
IUUC-Pop-099806
POPTR_0002s25000
B9GQP0
POPTRDRAFT_816933; POPTR_0002s25000g
IUUC-Pop-099169
POPTR_0002s17630
B9GR56
POPTRDRAFT_552313; POPTR_0002s17630g
IUUC-Pop-099713
POPTR_0002s17510
B9GR43
POPTRDRAFT_552304; POPTR_0002s17510g
IUUC-Pop-099031
POPTR_0002s16160
B9GQA0
POPTRDRAFT_816599; POPTR_0002s16160g
IUUC-Pop-099554
POPTR_0002s16150
B9GQ99
POPTR_0002s16150g
IUUC-Pop-098889
POPTR_0002s13410
B9GP24
POPTRDRAFT_551914; POPTR_0002s13410g
IUUC-Pop-098956
POPTR_0002s11730
B9GNN0
POPTRDRAFT_754893; POPTR_0002s11730g
IUUC-Pop-099832
POPTR_0002s11710
B9GNM9
POPTRDRAFT_852160; POPTR_0002s11710g
IUUC-Pop-099973
POPTR_0002s07130
B9GTL1
POPTRDRAFT_551342; POPTR_0002s07130g
IUUC-Pop-099908
POPTR_0002s03870
B9GS07
POPTRDRAFT_798492; POPTR_0002s03870g
IUUC-Pop-099454
POPTR_0002s02320
B9GQU5
POPTR_0002s02320g
IUUC-Pop-099995
POPTR_0002s01090
B9GQ09
POPTRDRAFT_753906; POPTR_0002s01090g
IUUC-Pop-099966
POPTR_0002s00910
B9NDM5
POPTRDRAFT_593178; POPTR_0002s00910g
IUUC-Pop-099944
POPTR_0001s41200
U5GWJ4
POPTRDRAFT_263506; POPTR_0001s41200g
IUUC-Pop-099978
POPTR_0001s24600
B9GJP1
POPTRDRAFT_549179; POPTR_0001s24600g
IUUC-Pop-099392
POPTR_0001s24550
B9GJP6
POPTRDRAFT_752170; POPTR_0001s24550g
IUUC-Pop-099104
POPTR_0001s22390
B9GHM3
POPTR_0001s22390g
IUUC-Pop-098909
POPTR_0001s22370
B9GHM1
POPTRDRAFT_797590; POPTR_0001s22370g
IUUC-Pop-099160
POPTR_0001s15580
U5GTW2
POPTRDRAFT_423997; POPTR_0001s15580g
IUUC-Pop-099357
POPTR_0001s12980
B9GMU0
POPTRDRAFT_847253; POPTR_0001s12980g
IUUC-Pop-099295
POPTR_0001s12800
B9GMV7
POPTRDRAFT_751000; POPTR_0001s12800g
IUUC-Pop-098857
POPTR_0001s04980
B9GLL5
POPTR_0001s04980g