Tetraodon nigroviridis         E3 activity/RING/U-box


※ E3 activity/RING/U-box family introduction

    The U-box is a protein domain with about 70 amino acids. Although the U-box domain is similar with the RING domain, the zinc-binding sites in the RING domain are replaced by conserved charged and polar residues to maintain structure and activity (1). Previously, the U-box protein was considered as a ubiquitin chain assembly factor to catalyze the formation of a ubiquitin chain on ubiquitinated substrates, while recent studies showed that it could mediate polyubiquitylation in the absence of a HECT type or RING-finger type E3. Although the understanding of the detailed mechanisms and functions of the U-box proteins are still limited, it is proposed that they are involved in various biological processes such as the cellular stress response to the intracellular accumulation of abnormal proteins (2).

1. http://www.ebi.ac.uk/interpro/entry/IPR003613

2. Hatakeyama, S. and K. I. Nakayama (2003) U-box proteins as a new family of ubiquitin ligases. Biochem. Biophys. Res. Commun., 302(4): 635-45. PMID: 12646216




There are 47 genes.  Reviewed (0 or Unreviewed (47Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Tni-119848
ENSTNIG00000019280.1
H3DPN3
ube4a
IUUC-Tni-119821
ENSTNIG00000019107.1
H3DP52
nsmce2
IUUC-Tni-119874
ENSTNIG00000018719.1
H3DN00
IUUC-Tni-120557
ENSTNIG00000018627.1
H3DMQ4
ftr87
IUUC-Tni-119774
ENSTNIG00000017866.1
H3DKH9
rnf114
IUUC-Tni-120476
ENSTNIG00000017055.1
H3DI40
IUUC-Tni-120789
ENSTNIG00000016677.1
H3DGZ0
ubox5
IUUC-Tni-119804
ENSTNIG00000016494.1
H3DGE9
WDSUB1 (1 of many)
IUUC-Tni-119913
ENSTNIG00000015690.1
H3DE22
si:ch1073-440b2.1
IUUC-Tni-120514
ENSTNIG00000015353.1
H3DD24
ppil2
IUUC-Tni-120862
ENSTNIG00000015170.1
H3DCI3
ube4b
IUUC-Tni-120334
ENSTNIG00000014219.1
H3D9P1
prp19
IUUC-Tni-119658
ENSTNIG00000014113.1
H3D9D1
btr01
IUUC-Tni-120136
ENSTNIG00000013934.1
H3D8U8
IUUC-Tni-119875
ENSTNIG00000013423.1
H3D7C7
IUUC-Tni-120295
ENSTNIG00000013117.1
H3D6F9
IUUC-Tni-120572
ENSTNIG00000012809.1
H3D5J4
stub1
IUUC-Tni-120165
ENSTNIG00000012519.1
H3D4Q0
rnf41
IUUC-Tni-120277
ENSTNIG00000011614.1
H3D226
IUUC-Tni-120044
ENSTNIG00000010708.1
H3CZE1
IUUC-Tni-120490
ENSTNIG00000010448.1
H3CYM1
trim35-12
IUUC-Tni-119680
ENSTNIG00000010440.1
H3CYL2
IUUC-Tni-120905
ENSTNIG00000009934.1
H3CX41
trim47
IUUC-Tni-120475
ENSTNIG00000009597.1
H3CW38
traf6
IUUC-Tni-119850
ENSTNIG00000009471.1
H3CVQ9
wdsub1
IUUC-Tni-120111
ENSTNIG00000009101.1
H3CUM6
trim69
IUUC-Tni-120550
ENSTNIG00000008571.1
H3CT27
ftr82
IUUC-Tni-119655
ENSTNIG00000007420.1
H3CPP3
btr12
IUUC-Tni-120467
ENSTNIG00000007419.1
H3CPP2
IUUC-Tni-120135
ENSTNIG00000006562.1
H3CM56
trim35-33
IUUC-Tni-119966
ENSTNIG00000006492.1
H3CLY1
btr30
IUUC-Tni-120127
ENSTNIG00000006391.1
H3CLM8
IUUC-Tni-120375
ENSTNIG00000005721.1
H3CJK3
IUUC-Tni-120286
ENSTNIG00000005497.1
H3CIW4
IUUC-Tni-119816
ENSTNIG00000005451.1
H3CIR3
IUUC-Tni-119822
ENSTNIG00000004861.1
H3CGZ5
LDB1 (1 of many)
IUUC-Tni-119994
ENSTNIG00000004433.1
H3CFP4
RNF166
IUUC-Tni-120856
ENSTNIG00000004343.1
H3CFF2
trim8b
IUUC-Tni-120766
ENSTNIG00000004186.1
H3CEY4
lonrf1l
IUUC-Tni-120114
ENSTNIG00000003683.1
H3CDF7
IUUC-Tni-120112
ENSTNIG00000003425.1
H3CCN9
pkp4
IUUC-Tni-119672
ENSTNIG00000002946.1
H3CB92
IUUC-Tni-120778
ENSTNIG00000001084.1
H3BYK4
IUUC-Tni-120785
ENSTNIG00000014348.1
H3C5E2
ftr86
IUUC-Tni-119979
ENSTNIG00000008203.1
H3C6K3
trim35-28
IUUC-Tni-120825
ENSTNIG00000018810.1
H3BX14
IUUC-Tni-120567
ENSTNIG00000000714.1
H3C080