Vitis vinifera         E3 activity/RING/U-box


※ E3 activity/RING/U-box family introduction

    The U-box is a protein domain with about 70 amino acids. Although the U-box domain is similar with the RING domain, the zinc-binding sites in the RING domain are replaced by conserved charged and polar residues to maintain structure and activity (1). Previously, the U-box protein was considered as a ubiquitin chain assembly factor to catalyze the formation of a ubiquitin chain on ubiquitinated substrates, while recent studies showed that it could mediate polyubiquitylation in the absence of a HECT type or RING-finger type E3. Although the understanding of the detailed mechanisms and functions of the U-box proteins are still limited, it is proposed that they are involved in various biological processes such as the cellular stress response to the intracellular accumulation of abnormal proteins (2).

1. http://www.ebi.ac.uk/interpro/entry/IPR003613

2. Hatakeyama, S. and K. I. Nakayama (2003) U-box proteins as a new family of ubiquitin ligases. Biochem. Biophys. Res. Commun., 302(4): 635-45. PMID: 12646216




There are 69 genes.  Reviewed (0 or Unreviewed (69Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Vvi-131123
VIT_19s0014g02900
F6H256
ATRMA3; VIT_19s0014g02900
IUUC-Vvi-131249
VIT_18s0166g00190
F6HW89
VIT_18s0166g00190
IUUC-Vvi-131623
VIT_18s0122g01040
F6I6U1
VIT_18s0122g01040
IUUC-Vvi-131560
VIT_18s0001g15320
F6H093
SEU; VIT_18s0001g15320
IUUC-Vvi-131112
VIT_18s0001g14390
F6H1L3
VIT_18s0001g14390
IUUC-Vvi-131228
VIT_18s0001g14180
E0CQ50
PUB15; VIT_18s0001g14180
IUUC-Vvi-131457
VIT_18s0001g12620
F6H051
VIT_18s0001g12620
IUUC-Vvi-131644
VIT_18s0001g08790
F6H182
VIT_18s0001g08790
IUUC-Vvi-130884
VIT_17s0000g08080
F6GSS2
VIT_17s0000g08080
IUUC-Vvi-131166
VIT_17s0000g07730
F6GSV2
VIT_17s0000g07730
IUUC-Vvi-131504
VIT_16s0098g01320
E0CV89
VIT_16s0098g01320
IUUC-Vvi-131172
VIT_16s0050g00690
E0CUZ8
VIT_16s0050g00690
IUUC-Vvi-131503
VIT_16s0013g01920
D7U7E2
VIT_16s0013g01920
IUUC-Vvi-131057
VIT_15s0046g02480
D7UCB8
VIT_15s0046g02480
IUUC-Vvi-131288
VIT_15s0046g00020
D7UCX6
VIT_15s0046g00020
IUUC-Vvi-131022
VIT_15s0045g01200
F6I1H1
VIT_15s0045g01200
IUUC-Vvi-131248
VIT_15s0045g01160
D7U5S8
VIT_15s0045g01160
IUUC-Vvi-130891
VIT_14s0108g01390
D7SXH7
VIT_14s0108g01390
IUUC-Vvi-131041
VIT_14s0066g01870
F6HV30
VIT_14s0066g01870
IUUC-Vvi-131465
VIT_13s0067g03030
F6HC73
VIT_13s0067g03030
IUUC-Vvi-131243
VIT_13s0067g01460
F6HCB0
VIT_13s0067g01460
IUUC-Vvi-131729
VIT_13s0019g04710
F6HND8
ATPUB14; VIT_13s0019g04710
IUUC-Vvi-131386
VIT_12s0059g01420
D7TEE6
COP1; VIT_12s0059g01420
IUUC-Vvi-131259
VIT_12s0028g03860
F6H5B3
RMA1; VIT_12s0028g03860
IUUC-Vvi-131144
VIT_11s0016g03590
D7TBK5
VIT_11s0016g03590
IUUC-Vvi-131372
VIT_11s0016g01830
D7TCL7
VIT_11s0016g01830
IUUC-Vvi-131159
VIT_10s0003g01730
F6HMC1
PUB17; VIT_10s0003g01730
IUUC-Vvi-131094
VIT_08s0105g00200
F6H6S6
PUB24; VIT_08s0105g00200
IUUC-Vvi-131052
VIT_08s0105g00190
F6H6S5
VIT_08s0105g00190
IUUC-Vvi-131012
VIT_08s0105g00180
F6H6S4
VIT_08s0105g00180
IUUC-Vvi-131545
VIT_08s0058g01100
F6GXX9
VIT_08s0058g01100
IUUC-Vvi-131195
VIT_08s0007g06660
F6HLI0
VIT_08s0007g06660
IUUC-Vvi-131364
VIT_07s0129g00590
F6HSV9
VIT_07s0129g00590
IUUC-Vvi-131336
VIT_07s0129g00120
D7TT68
VIT_07s0129g00120
IUUC-Vvi-131156
VIT_07s0129g00040
D7TT60
VIT_07s0129g00040
IUUC-Vvi-131715
VIT_07s0005g03520
F6HZL0
VIT_07s0005g03520
IUUC-Vvi-130999
VIT_06s0009g00370
F6HAE4
VIT_06s0009g00370
IUUC-Vvi-131173
VIT_06s0009g00320
F6HAE5
VIT_06s0009g00320
IUUC-Vvi-131003
VIT_06s0004g06750
D7SJW4
VIT_06s0004g06750
IUUC-Vvi-131181
VIT_06s0004g04580
F6GV18
VIT_06s0004g04580
IUUC-Vvi-131752
VIT_06s0004g04530
F6GV22
PUB13; VIT_06s0004g04530
IUUC-Vvi-130964
VIT_06s0004g01260
D7SLC9
VIT_06s0004g01260
IUUC-Vvi-131668
VIT_05s0049g01840
D7SZN5
VIT_05s0049g01840
IUUC-Vvi-131154
VIT_05s0020g04560
F6HDW7
VIT_05s0020g04560
IUUC-Vvi-131284
VIT_04s0044g01460
F6I0D6
VIT_04s0044g01460
IUUC-Vvi-131751
VIT_04s0044g00870
F6I0G9
VIT_04s0044g00870
IUUC-Vvi-131590
VIT_04s0043g00840
D7TDU7
VIT_04s0043g00840
IUUC-Vvi-130887
VIT_04s0023g01920
D7SPC5
VIT_04s0023g01920
IUUC-Vvi-131225
VIT_04s0023g01130
F6GWZ9
VIT_04s0023g01130
IUUC-Vvi-131725
VIT_03s0063g02050
A5B286
VIT_03s0063g02050; VITISV_016726
IUUC-Vvi-131329
VIT_03s0063g00180
F6HQ94
VIT_03s0063g00180
IUUC-Vvi-131187
VIT_03s0038g03660
F6I0T1
VIT_03s0038g03660
IUUC-Vvi-131261
VIT_01s0150g00330
F6HJ78
VIT_01s0150g00330
IUUC-Vvi-131413
VIT_01s0150g00140
F6HJ69
VIT_01s0150g00140
IUUC-Vvi-131344
VIT_01s0026g00190
D7TNR3
VIT_01s0026g00190
IUUC-Vvi-131485
VIT_01s0011g06140
F6HFB5
VIT_01s0011g06140
IUUC-Vvi-131185
VIT_01s0011g04770
F6HFJ0
VIT_01s0011g04770
IUUC-Vvi-131273
VIT_01s0010g02890
F6HG65
VIT_01s0010g02890
IUUC-Vvi-131589
VIT_01s0010g01230
F6HGH8
VIT_01s0010g01230
IUUC-Vvi-131502
VIT_01s0010g00710
F6HGF4
VIT_01s0010g00710
IUUC-Vvi-131521
VIT_00s2497g00010
F6HS14
VIT_00s2497g00010
IUUC-Vvi-130942
VIT_00s0916g00010
A5B310
VIT_00s0916g00010; VITISV_013326
IUUC-Vvi-131091
VIT_00s0669g00010
D6CH15
VIT_00s0642g00010; VIT_00s0669g00010
IUUC-Vvi-131168
VIT_00s0524g00030
D7SZ16
VIT_00s0524g00030
IUUC-Vvi-131334
VIT_00s0524g00010
F6H886
VIT_00s0524g00010
IUUC-Vvi-131367
VIT_00s0471g00010
F6HJQ8
VIT_00s0471g00010
IUUC-Vvi-131324
VIT_00s0374g00050
F6HDF0
VIT_00s0374g00050; VIT_00s2364g00010
IUUC-Vvi-131146
VIT_00s0341g00020
D7SYZ6
VIT_00s0341g00020
IUUC-Vvi-131105
VIT_00s0203g00190
F6I745
VIT_00s0203g00190