Populus trichocarpa         E3 activity/RING/PHD


※ E3 activity/RING/PHD family introduction

    The plant homeodomain (PHD) zinc finger domain has a C4HC3-type motif, and is widely distributed in eukaryotes, being found in many chromatin regulatory factors (1).PHD is thought to be involved in chromatin-mediated transcriptional regulation (2). The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger.

1. http://pfam.xfam.org/family/PF00628

2. Rein Aasland, Toby J. Gibson, A.Francis Stewart (1995). The PHD finger: Implications for chromatin-mediated transcriptional regulation. Trends in Biochemical Sciences., 20(2):56-59. PMID:77015622




There are 24 genes.  Reviewed (0 or Unreviewed (24Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pop-099544
POPTR_0019s04940
B9I5Y6
POPTRDRAFT_571214; POPTR_0013s05540g
IUUC-Pop-099974
POPTR_0018s05470
U5FFQ7
POPTR_0018s05470g
IUUC-Pop-099061
POPTR_0015s01190
B9IDM7
POPTR_0015s01190g
IUUC-Pop-098880
POPTR_0013s05530
B9IPP2
POPTR_0019s04940g
IUUC-Pop-099322
POPTR_0011s01570
B9HZB2
POPTR_0011s01570g
IUUC-Pop-099125
POPTR_0010s19540
IUUC-Pop-099324
POPTR_0009s12380
B9HRI7
POPTRDRAFT_821156; POPTR_0009s12380g
IUUC-Pop-099620
POPTR_0009s06460
B9HNQ8
POPTRDRAFT_722815; POPTR_0009s06460g
IUUC-Pop-099585
POPTR_0009s06440
B9HNR0
POPTRDRAFT_557789; POPTR_0009s06440g
IUUC-Pop-099691
POPTR_0009s05910
B9HNV8
POPTRDRAFT_1087966; POPTR_0009s05910g
IUUC-Pop-099078
POPTR_0008s06920
XM_002311191.1
IUUC-Pop-099272
POPTR_0006s25440
B9H8Y6
POPTRDRAFT_561745; POPTR_0006s25440g
IUUC-Pop-099768
POPTR_0006s23990
B9HD31
POPTRDRAFT_717823; POPTR_0006s23990g
IUUC-Pop-099997
POPTR_0006s14760
B9HDV8
POPTRDRAFT_561024; POPTR_0006s14760g
IUUC-Pop-099875
POPTR_0006s12180
U5G6W9
POPTR_0006s12180g
IUUC-Pop-099257
POPTR_0005s20620
B9H7K3
POPTRDRAFT_559297; POPTR_0005s20620g
IUUC-Pop-099262
POPTR_0004s22720
U5GH02
POPTRDRAFT_584461; POPTR_0004s22720g
IUUC-Pop-099219
POPTR_0004s20090
U5GGA5
XM_002328044.1; POPTR_0004s20090g
IUUC-Pop-098853
POPTR_0004s16700
B9H0V2
POPTR_0004s16700g
IUUC-Pop-098948
POPTR_0004s00670
B9N8F2
POPTR_0004s00670g
IUUC-Pop-099415
POPTR_0003s17260
B9GZZ6
POPTRDRAFT_712459; POPTR_0003s17260g
IUUC-Pop-099708
POPTR_0003s04070
B9GVE0
POPTRDRAFT_830643; POPTR_0003s04070g
IUUC-Pop-099041
POPTR_0002s11940
B9GNP6
POPTR_0002s11940g
IUUC-Pop-099385
POPTR_0002s07740
B9GTY7
POPTRDRAFT_754527; POPTR_0002s07740g