Latimeria chalumnae         E3 activity/RING/U-box


※ E3 activity/RING/U-box family introduction

    The U-box is a protein domain with about 70 amino acids. Although the U-box domain is similar with the RING domain, the zinc-binding sites in the RING domain are replaced by conserved charged and polar residues to maintain structure and activity (1). Previously, the U-box protein was considered as a ubiquitin chain assembly factor to catalyze the formation of a ubiquitin chain on ubiquitinated substrates, while recent studies showed that it could mediate polyubiquitylation in the absence of a HECT type or RING-finger type E3. Although the understanding of the detailed mechanisms and functions of the U-box proteins are still limited, it is proposed that they are involved in various biological processes such as the cellular stress response to the intracellular accumulation of abnormal proteins (2).

1. http://www.ebi.ac.uk/interpro/entry/IPR003613

2. Hatakeyama, S. and K. I. Nakayama (2003) U-box proteins as a new family of ubiquitin ligases. Biochem. Biophys. Res. Commun., 302(4): 635-45. PMID: 12646216




There are 97 genes.  Reviewed (0 or Unreviewed (97Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Lch-050638
ENSLACG00000018923.1
H3BI13
TRIM50
IUUC-Lch-050316
ENSLACG00000018433.1
H3BGF9
trim16
IUUC-Lch-049630
ENSLACG00000018185.1
H3BFM5
UBE4A
IUUC-Lch-050028
ENSLACG00000017660.1
H3BDX3
RNF114
IUUC-Lch-050266
ENSLACG00000017605.1
H3BDQ5
RNF41
IUUC-Lch-050510
ENSLACG00000016797.1
H3BB16
RNF135
IUUC-Lch-050569
ENSLACG00000016760.2
H3BAX6
NOSIP
IUUC-Lch-050030
ENSLACG00000016090.1
H3B8P5
IUUC-Lch-049806
ENSLACG00000016062.1
H3B8L4
IUUC-Lch-050013
ENSLACG00000015578.1
H3B716
IUUC-Lch-049558
ENSLACG00000015359.1
H3B6B6
IUUC-Lch-050117
ENSLACG00000015162.1
H3B5P2
IUUC-Lch-049655
ENSLACG00000014948.1
H3B503
IUUC-Lch-050128
ENSLACG00000014779.1
H3B4F6
TRIM35
IUUC-Lch-049681
ENSLACG00000014641.1
H3B3Z3
PPIL2
IUUC-Lch-050381
ENSLACG00000014549.1
H3B3P1
LOC102366968
IUUC-Lch-050350
ENSLACG00000014272.1
H3B2T0
IUUC-Lch-049882
ENSLACG00000014268.1
H3B2S6
LOC102346640
IUUC-Lch-050675
ENSLACG00000014133.1
H3B2C7
IUUC-Lch-049828
ENSLACG00000014035.1
H3B217
IUUC-Lch-050378
ENSLACG00000013938.2
H3B1Q7
ANKAR
IUUC-Lch-049668
ENSLACG00000013924.1
H3B1P0
IUUC-Lch-049769
ENSLACG00000013854.1
H3B1F9
IUUC-Lch-049509
ENSLACG00000013752.1
H3B148
IUUC-Lch-050374
ENSLACG00000013594.1
H3B0L9
trim105
IUUC-Lch-050351
ENSLACG00000013514.1
H3B0C8
IUUC-Lch-049677
ENSLACG00000013231.1
H3AZG7
IUUC-Lch-050596
ENSLACG00000013063.1
H3AYW7
IUUC-Lch-049908
ENSLACG00000012920.1
H3AYG0
IUUC-Lch-049866
ENSLACG00000012829.1
H3AY56
LOC102364295
IUUC-Lch-050429
ENSLACG00000012571.1
H3AXB4
LONRF3
IUUC-Lch-050524
ENSLACG00000012333.1
H3AWJ0
RBBP6
IUUC-Lch-049738
ENSLACG00000012221.1
H3AW60
IUUC-Lch-049621
ENSLACG00000011895.1
H3AV38
IUUC-Lch-050355
ENSLACG00000011710.1
H3AUH9
LOC102348261
IUUC-Lch-050307
ENSLACG00000011029.1
H3AS96
IUUC-Lch-050587
ENSLACG00000010922.2
H3ARY1
UBOX5
IUUC-Lch-049787
ENSLACG00000010811.2
H3ARK8
LOC102356412
IUUC-Lch-049637
ENSLACG00000010516.1
H3AQM8
IUUC-Lch-049988
ENSLACG00000010426.1
H3AQC6
STUB1
IUUC-Lch-049895
ENSLACG00000009710.1
H3AN13
LDB2
IUUC-Lch-050127
ENSLACG00000007507.1
H3AFR0
IUUC-Lch-049433
ENSLACG00000007476.2
H3AFM4
TRIM8
IUUC-Lch-050087
ENSLACG00000007382.1
H3AFC0
IUUC-Lch-050166
ENSLACG00000007299.1
H3AF27
IUUC-Lch-049645
ENSLACG00000007161.1
H3AEL8
IUUC-Lch-049811
ENSLACG00000007029.1
H3AE71
IUUC-Lch-049548
ENSLACG00000006951.1
H3ADX9
LOC102350930
IUUC-Lch-049698
ENSLACG00000006166.1
H3ABC5
IUUC-Lch-050404
ENSLACG00000006145.1
H3ABA1
LONRF1
IUUC-Lch-049588
ENSLACG00000005232.1
H3A8C1
IUUC-Lch-050328
ENSLACG00000005132.1
H3A811
IUUC-Lch-050043
ENSLACG00000005029.1
H3A7N8
IUUC-Lch-050148
ENSLACG00000004670.1
H3A6I5
LOC102351613
IUUC-Lch-050233
ENSLACG00000004424.1
H3A5Q4
IUUC-Lch-049652
ENSLACG00000004393.1
H3A5L9
LOC102362776
IUUC-Lch-050146
ENSLACG00000004120.1
H3A4Q8
IUUC-Lch-049447
ENSLACG00000003844.1
H3A3U9
IUUC-Lch-049788
ENSLACG00000003579.1
H3A2Z9
LONRF2
IUUC-Lch-049843
ENSLACG00000003480.1
H3A2N6
IUUC-Lch-049807
ENSLACG00000003450.1
H3A2K2
IUUC-Lch-050105
ENSLACG00000003434.1
H3A2I6
PRPF19
IUUC-Lch-049877
ENSLACG00000003429.1
H3A2I1
IUUC-Lch-050352
ENSLACG00000003350.1
H3A288
LOC102360370
IUUC-Lch-049437
ENSLACG00000003299.1
H3A235
IUUC-Lch-049821
ENSLACG00000003168.1
H3A1N5
TRAF6
IUUC-Lch-050075
ENSLACG00000003130.1
H3A1I9
IUUC-Lch-049612
ENSLACG00000002979.1
H3A110
IUUC-Lch-049527
ENSLACG00000002938.1
H3A0W4
IUUC-Lch-049599
ENSLACG00000002863.1
H3A0N4
IUUC-Lch-050391
ENSLACG00000002681.1
H3A026
IUUC-Lch-049592
ENSLACG00000002609.1
H2ZZU7
IUUC-Lch-050051
ENSLACG00000002506.1
H2ZZI1
IUUC-Lch-049643
ENSLACG00000002457.1
H2ZZC7
IUUC-Lch-050534
ENSLACG00000002406.2
H2ZZ69
UBE4B
IUUC-Lch-050632
ENSLACG00000002380.1
H2ZZ38
IUUC-Lch-049941
ENSLACG00000002365.1
H2ZZ23
IUUC-Lch-049574
ENSLACG00000002187.1
H2ZYH9
RNF151
IUUC-Lch-049470
ENSLACG00000002177.1
H2ZYG7
IUUC-Lch-049626
ENSLACG00000002117.1
H2ZY97
IUUC-Lch-049538
ENSLACG00000002067.1
H2ZY43
LOC102365990
IUUC-Lch-049500
ENSLACG00000001948.1
H2ZXQ8
IUUC-Lch-049577
ENSLACG00000001717.1
H2ZX02
IUUC-Lch-050624
ENSLACG00000001503.1
H2ZWA9
IUUC-Lch-049823
ENSLACG00000001483.1
H2ZW87
IUUC-Lch-050386
ENSLACG00000001217.1
H2ZVD3
IUUC-Lch-049919
ENSLACG00000001180.1
H2ZV94
IUUC-Lch-049642
ENSLACG00000001049.1
H2ZUV1
IUUC-Lch-049924
ENSLACG00000000943.1
H2ZUI3
IUUC-Lch-049977
ENSLACG00000000916.1
H2ZUF4
IUUC-Lch-050465
ENSLACG00000000904.1
H2ZUE2
IUUC-Lch-049998
ENSLACG00000000826.1
H2ZU54
IUUC-Lch-050125
ENSLACG00000000792.1
H2ZU09
IUUC-Lch-050065
ENSLACG00000000709.1
H2ZTR9
IUUC-Lch-050594
ENSLACG00000000599.1
H2ZTF0
IUUC-Lch-050012
ENSLACG00000000559.1
H2ZTA6
IUUC-Lch-050059
ENSLACG00000000422.1
H2ZSV3