Brachypodium distachyon         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 17 genes.  Reviewed (0 or Unreviewed (17Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Bdi-014210
BRADI4G40865
I1ITU0
IUUC-Bdi-014842
BRADI4G23767
I1IMY3
BRADI_4g23767
IUUC-Bdi-014428
BRADI4G23747
I1IMY1
LOC100829832; BRADI_4g23747
IUUC-Bdi-014956
BRADI4G13864
I1IKF5
LOC100829733
IUUC-Bdi-014220
BRADI4G13857
I1IKF4
IUUC-Bdi-014115
BRADI3G54650
I1IDN6
LOC100842860; BRADI_3g54650
IUUC-Bdi-014765
BRADI3G40750
I1I8R4
IUUC-Bdi-014916
BRADI3G39210
I1I876
LOC100830848; BRADI_3g39210
IUUC-Bdi-014862
BRADI3G18440
I1I242
LOC100838302; BRADI_3g18440
IUUC-Bdi-014215
BRADI3G18350
I1I230
LOC100843579; BRADI_3g18350
IUUC-Bdi-014869
BRADI3G18250
I1I220
LOC100834622; BRADI_3g18257
IUUC-Bdi-014937
BRADI2G58152
I1HUE1
LOC100828777; BRADI_2g58152
IUUC-Bdi-014143
BRADI2G04040
I1HCB1
LOC100833476; BRADI_2g04040
IUUC-Bdi-014888
BRADI1G32260
I1GW07
LOC100832017; BRADI_1g32260
IUUC-Bdi-014439
BRADI1G32247
I1GW06
LOC100842606; BRADI_1g32247
IUUC-Bdi-014653
BRADI1G32230
I1GW03
LOC100841387
IUUC-Bdi-014695
BRADI1G30767
I1GVI8
LOC100838242; BRADI_1g30767