Ciona intestinalis         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 12 genes.  Reviewed (0 or Unreviewed (12Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Cin-025680
ENSCING00000018002.1
H2XSR0
IUUC-Cin-025425
ENSCING00000019685.1
F7B8D7
IUUC-Cin-025706
ENSCING00000015250.2
F6ULJ5
IUUC-Cin-025445
ENSCING00000010608.3
F6TND9
IUUC-Cin-025153
ENSCING00000010405.3
F6R701
IUUC-Cin-025195
ENSCING00000008356.3
F7AKC9
LOC100177101
IUUC-Cin-025253
ENSCING00000007259.3
F6U7S8
LOC100185495
IUUC-Cin-025289
ENSCING00000006476.3
F6Q2J0
LOC100179937
IUUC-Cin-025757
ENSCING00000005649.3
F6Y221
LOC100177716
IUUC-Cin-025636
ENSCING00000004284.3
F6UG35
LOC100187520
IUUC-Cin-025270
ENSCING00000003891.3
F6SM21
LOC100175104
IUUC-Cin-025544
ENSCING00000001638.3
F7B7S4