Danio rerio         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 48 genes.  Reviewed (1 or Unreviewed (47Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Dre-028840
Q1ECZ2
keap1a; keap1
IUUC-Dre-028117
ENSDARG00000105343.1
A0A140LGQ1
klhl33
IUUC-Dre-028417
ENSDARG00000016531.11
A0A140LGN1
klhl4
IUUC-Dre-027361
ENSDARG00000076449.4
A0A140LGF5
kbtbd13
IUUC-Dre-028524
ENSDARG00000056647.5
A0A140LH84
klhl3
IUUC-Dre-027396
ENSDARG00000105443.1
A0A140LGZ3
si:ch211-63p21.8
IUUC-Dre-028137
ENSDARG00000103786.1
A0A0R4IP02
klhl13
IUUC-Dre-028053
ENSDARG00000102418.1
A0A0G2KCH4
KLHL25; klhl25
IUUC-Dre-027603
ENSDARG00000100519.1
Q7T330
spop; zgc:64140
IUUC-Dre-028111
ENSDARG00000003974.10
A0A0R4IIR0
spoplb
IUUC-Dre-028758
ENSDARG00000100875.1
E7F464
GAN
IUUC-Dre-028344
ENSDARG00000100631.1
A0A0G2KGJ0
klhl12
IUUC-Dre-028014
ENSDARG00000101445.1
A0A0N4STP4
klhl7
IUUC-Dre-027723
ENSDARG00000101270.1
A2RRV4
klhl8
IUUC-Dre-028188
ENSDARG00000097283.1
X1WGW4
klhl10b.1
IUUC-Dre-028122
ENSDARG00000078001.5
X1WFF7
kbtbd7
IUUC-Dre-028516
ENSDARG00000076094.4
E7FCD9
klhl30
IUUC-Dre-027876
ENSDARG00000052426.5
X1WD22
si:ch211-256e16.3
IUUC-Dre-027388
ENSDARG00000074634.4
A9CP01
keap1b
IUUC-Dre-027856
ENSDARG00000093836.2
F1QI27
si:dkey-83f18.14
IUUC-Dre-028448
ENSDARG00000035398.4
F1QKP6
enc1
IUUC-Dre-028694
ENSDARG00000039255.5
Q6NYM1
klhl21; zgc:76933
IUUC-Dre-028401
ENSDARG00000037324.7
E7FB30
klhl17
IUUC-Dre-028103
ENSDARG00000008275.9
E9QHN1
klhl24b
IUUC-Dre-028773
ENSDARG00000086463.2
F1REQ9
klhl13
IUUC-Dre-027939
ENSDARG00000087688.2
E7EZB5
KLHL29 (1 of many); klhl29
IUUC-Dre-028364
ENSDARG00000087226.2
Q08CL1
kbtbd2; zgc:152954
IUUC-Dre-027681
ENSDARG00000078475.3
E7FED5
klhl23
IUUC-Dre-028688
ENSDARG00000070698.5
F1QMY7
kbtbd8
IUUC-Dre-027739
ENSDARG00000068888.4
E9QIN8
klhl41a; kbtbd10a
IUUC-Dre-027625
ENSDARG00000021739.8
Q08BL9
klhl24a; klhl24; zgc:153342
IUUC-Dre-028136
ENSDARG00000063577.6
E7F563
klhl35; si:ch73-211p17.3
IUUC-Dre-028618
ENSDARG00000062122.5
B8JIG8
klhl5
IUUC-Dre-028082
ENSDARG00000061786.7
E9QC48
klhl2; si:ch211-287c11.1
IUUC-Dre-028505
ENSDARG00000058322.4
Q7ZT06
enc3; enc1; enc1l
IUUC-Dre-028799
ENSDARG00000028548.8
E7FCF6
klhl10b.2
IUUC-Dre-028622
ENSDARG00000045130.4
F1Q6J6
klhl11
IUUC-Dre-028603
ENSDARG00000039052.6
B3DIV9
klhl40a; kbtbd5a
IUUC-Dre-027423
ENSDARG00000038801.5
E9QC58
klhl20
IUUC-Dre-028393
ENSDARG00000016132.8
Q1ECZ2
keap1a; keap1
IUUC-Dre-027948
ENSDARG00000026990.8
B8JJT0
klhl6
IUUC-Dre-027437
ENSDARG00000043799.6
E7F8E3
KLHL29 (1 of many); LOC100334314
IUUC-Dre-027589
ENSDARG00000001882.7
Q3ZB90
kbtbd12; klhdc6; zgc:113365
IUUC-Dre-028248
ENSDARG00000004306.9
B0S619
klhl18
IUUC-Dre-028411
ENSDARG00000005814.6
F1RDL1
klhl10a
IUUC-Dre-028278
ENSDARG00000006757.5
F1QEG2
klhl41b; kbtbd10b
IUUC-Dre-027880
ENSDARG00000010563.9
Q5BL35
spopla; spopl; zgc:101524
IUUC-Dre-028077
ENSDARG00000019125.6
E9QJ30
klhl40b; kbtbd5b