Latimeria chalumnae         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 34 genes.  Reviewed (0 or Unreviewed (34Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Lch-049449
ENSLACG00000017573.1
H3BDM1
KLHL17
IUUC-Lch-049709
ENSLACG00000016915.2
H3BBG0
KLHL6
IUUC-Lch-049594
ENSLACG00000016774.2
H3BAZ1
KLHL24
IUUC-Lch-049511
ENSLACG00000016466.1
H3B9Y4
keap1a; LOC102358487
IUUC-Lch-050211
ENSLACG00000015053.1
H3B5B1
KLHL25
IUUC-Lch-050412
ENSLACG00000013981.1
H3B1V6
KLHL23
IUUC-Lch-049700
ENSLACG00000013389.1
H3AZY7
KLHL22
IUUC-Lch-050477
ENSLACG00000012209.1
H3AW47
KLHL41
IUUC-Lch-049540
ENSLACG00000012003.2
H3AVG6
KLHL12
IUUC-Lch-049691
ENSLACG00000011893.1
H3AV36
IPP
IUUC-Lch-049815
ENSLACG00000011517.1
H3ATV3
KLHL7
IUUC-Lch-050195
ENSLACG00000011282.1
H3AT40
KLHL18
IUUC-Lch-049733
ENSLACG00000011196.1
H3ASU1
KBTBD8
IUUC-Lch-049911
ENSLACG00000011136.2
H3ASL9
KBTBD2
IUUC-Lch-050676
ENSLACG00000010399.1
H3AQ92
kbtbd7; KBTBD7
IUUC-Lch-049968
ENSLACG00000010154.1
H3APG9
KLHL20
IUUC-Lch-050253
ENSLACG00000009288.2
H3ALM0
GAN
IUUC-Lch-050246
ENSLACG00000008389.1
H3AIP0
KLHL3
IUUC-Lch-049646
ENSLACG00000007874.2
H3AGZ5
KEAP1
IUUC-Lch-049735
ENSLACG00000007645.1
H3AG78
ENC1
IUUC-Lch-050392
ENSLACG00000007641.1
H3AG73
IUUC-Lch-050241
ENSLACG00000007328.2
H3AF59
SPOP
IUUC-Lch-049939
ENSLACG00000006863.1
H3ADM7
KLHL2
IUUC-Lch-050402
ENSLACG00000006695.1
H3AD35
klhl13; KLHL13
IUUC-Lch-050292
ENSLACG00000006507.1
H3ACG4
KLHL38
IUUC-Lch-050036
ENSLACG00000005959.1
H3AAP8
SPOPL
IUUC-Lch-050123
ENSLACG00000005940.1
H3AAM7
KLHL40
IUUC-Lch-050280
ENSLACG00000004175.2
H3A4X4
BTBD9
IUUC-Lch-050568
ENSLACG00000003720.2
H3A3G3
KLHL5
IUUC-Lch-049819
ENSLACG00000002937.1
H3A0W3
klhl33
IUUC-Lch-050265
ENSLACG00000002782.1
H3A0D5
KLHL4
IUUC-Lch-049985
ENSLACG00000002740.1
H3A090
KLHL11
IUUC-Lch-050637
ENSLACG00000001523.2
H2ZWD1
KLHL10
IUUC-Lch-049445
ENSLACG00000000894.1
H2ZUD1
KLHL28