Oryza glaberrima         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 25 genes.  Reviewed (0 or Unreviewed (25Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ogl-077878
ORGLA11G0167700
I1R1N5
IUUC-Ogl-077727
ORGLA11G0167400
I1R1N2
IUUC-Ogl-077225
ORGLA10G0094600
I1QUR3
IUUC-Ogl-077752
ORGLA10G0094000
I1QUQ7
IUUC-Ogl-077115
ORGLA10G0093700
I1QUQ4
IUUC-Ogl-077329
ORGLA10G0093300
I1QUQ0
IUUC-Ogl-077300
ORGLA10G0093200
I1QUP9
IUUC-Ogl-076934
ORGLA10G0092400
I1QUP1
IUUC-Ogl-076944
ORGLA10G0091500
I1QUN2
IUUC-Ogl-077949
ORGLA08G0185900
I1QKA8
IUUC-Ogl-077633
ORGLA08G0185700
I1QKA6
IUUC-Ogl-077937
ORGLA08G0167900
I1QJS8
IUUC-Ogl-077473
ORGLA08G0058700
I1QGN6
IUUC-Ogl-077342
ORGLA08G0011900
I1QFB8
IUUC-Ogl-077435
ORGLA08G0011600
I1QFB5
IUUC-Ogl-077725
ORGLA07G0258700
I1QEP5
IUUC-Ogl-077183
ORGLA07G0224400
I1QGM6
IUUC-Ogl-077749
ORGLA07G0220000
I1QDK8
IUUC-Ogl-077607
ORGLA07G0001200
I1Q7C0
IUUC-Ogl-077911
ORGLA06G0203100
I1Q4G8
IUUC-Ogl-077616
ORGLA06G0090100
I1Q188
IUUC-Ogl-076977
ORGLA04G0230100
I1PQ32
IUUC-Ogl-077417
ORGLA03G0339100
I1PG95
IUUC-Ogl-077499
ORGLA01G0350600
I1NUG6
IUUC-Ogl-077595
ORGLA01G0037900
I1NKI9