Petromyzon marinus         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 14 genes.  Reviewed (0 or Unreviewed (14Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pma-094302
ENSPMAG00000009486.1
S4RYY9
klhl23
IUUC-Pma-094320
ENSPMAG00000008371.1
S4RVH6
IUUC-Pma-094318
ENSPMAG00000007585.1
S4RT21
IUUC-Pma-094509
ENSPMAG00000006976.1
S4RR75
klhl18
IUUC-Pma-094164
ENSPMAG00000006233.1
S4RNT4
klhl38b
IUUC-Pma-094226
ENSPMAG00000005556.1
S4RLR5
btbd9
IUUC-Pma-094134
ENSPMAG00000005106.1
S4RKC2
KLHL12
IUUC-Pma-094404
ENSPMAG00000004830.1
S4RJG3
klhl20
IUUC-Pma-094660
ENSPMAG00000004597.1
S4RIR2
klhl8
IUUC-Pma-094371
ENSPMAG00000003979.1
S4RGR8
klhl5
IUUC-Pma-094177
ENSPMAG00000003890.1
S4RGC2
klhl3
IUUC-Pma-094310
ENSPMAG00000003630.1
S4RFH9
SPOPL
IUUC-Pma-094515
ENSPMAG00000000574.1
S4R601
IUUC-Pma-094586
ENSPMAG00000000101.1
S4R4I5