Setaria italica         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 31 genes.  Reviewed (0 or Unreviewed (31Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Sit-110181
Si039929m.g
K4ALZ4
LOC101766104; SETIT_039929mg
IUUC-Sit-109944
Si038782m.g
K4AIS0
SETIT_038782mg
IUUC-Sit-109896
Si038736m.g
IUUC-Sit-109713
Si036264m.g
K4ABK7
LOC101765281; SETIT_036264mg
IUUC-Sit-110750
Si033200m.g
K4A2U8
SETIT_033200mg
IUUC-Sit-109725
Si028277m.g
K3ZNU7
LOC101776729; SETIT_028277mg
IUUC-Sit-110799
Si028191m.g
K3ZNL1
SETIT_028191mg
IUUC-Sit-110036
Si028061m.g
K3ZN86
LOC101773472; SETIT_028061mg
IUUC-Sit-110515
Si027703m.g
K3ZM89
LOC101777553; SETIT_027703mg
IUUC-Sit-110155
Si027683m.g
K3ZM69
LOC101779175; SETIT_027683mg
IUUC-Sit-110377
Si027673m.g
K3ZM60
SETIT_027673mg
IUUC-Sit-109872
Si027556m.g
K3ZLU4
LOC101775506; SETIT_027556mg
IUUC-Sit-110320
Si022449m.g
K3Z7C9
LOC101762289; SETIT_022449mg
IUUC-Sit-110310
Si015720m.g
K3YN80
LOC101763842; SETIT_015720mg
IUUC-Sit-110429
Si015693m.g
K3YN54
LOC101765072; SETIT_015693mg
IUUC-Sit-110090
Si015471m.g
K3YMJ1
LOC101758714; SETIT_015471mg
IUUC-Sit-110098
Si014065m.g
K3YIJ6
LOC101782337; SETIT_014065mg
IUUC-Sit-110776
Si014041m.g
K3YIH2
LOC101779771; SETIT_014041mg
IUUC-Sit-110650
Si012775m.g
K3YEV8
LOC101783028; SETIT_012775mg
IUUC-Sit-110298
Si012519m.g
K3YE58
LOC101780082; SETIT_012519mg
IUUC-Sit-110101
Si012494m.g
K3YE34
SETIT_012494mg
IUUC-Sit-110375
Si012199m.g
K3YD96
LOC101780883; SETIT_012199mg
IUUC-Sit-109954
Si012102m.g
K3YD00
SETIT_012102mg
IUUC-Sit-110619
Si011643m.g
K3YBP9
LOC101780484; SETIT_011643mg
IUUC-Sit-110505
Si010424m.g
K3Y883
LOC101779288; SETIT_010424mg
IUUC-Sit-110525
Si008801m.g
K3Y3L4
LOC101783773; SETIT_008801mg
IUUC-Sit-109741
Si008702m.g
K3Y3B7
SETIT_008702mg
IUUC-Sit-109775
Si008599m.g
K3Y314
LOC101766931; SETIT_008599mg
IUUC-Sit-109817
Si008117m.g
K3Y1Q1
LOC101774864; SETIT_008117mg
IUUC-Sit-110122
Si008057m.g
K3Y1J2
LOC101767331; SETIT_008057mg
IUUC-Sit-110089
Si002070m.g
K3XJJ7
LOC101761390; SETIT_002070mg