Takifugu rubripes         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 37 genes.  Reviewed (0 or Unreviewed (37Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Tru-117743
ENSTRUG00000017844.1
H2V972
ppig; klhl41
IUUC-Tru-118290
ENSTRUG00000017759.1
H2V8H9
kbtbd2
IUUC-Tru-118614
ENSTRUG00000017569.1
H2V745
klhl40b; klhl40
IUUC-Tru-118346
ENSTRUG00000017349.1
H2V5G5
IUUC-Tru-118098
ENSTRUG00000017069.1
H2V3E4
KLHL10 (1 of many)
IUUC-Tru-117586
ENSTRUG00000016735.1
H2V0W0
klhl13; LOC101069997
IUUC-Tru-118644
ENSTRUG00000016481.1
H2UYU2
klhl22
IUUC-Tru-117584
ENSTRUG00000016156.1
H2UWH7
si:ch211-253p14.2; kbtbd13
IUUC-Tru-118582
ENSTRUG00000016116.1
H2UW71
si:ch211-256e16.3; LOC101069892
IUUC-Tru-118655
ENSTRUG00000015960.1
H2UV32
klhl11
IUUC-Tru-118239
ENSTRUG00000015659.1
H2USV4
klhl2
IUUC-Tru-118677
ENSTRUG00000015644.1
H2USR9
keap1a; LOC101063192
IUUC-Tru-118078
ENSTRUG00000015376.1
H2UQR7
klhl3
IUUC-Tru-118597
ENSTRUG00000014969.1
H2UMU2
rcbtb1
IUUC-Tru-118549
ENSTRUG00000014968.1
H2UMT9
kbtbd12
IUUC-Tru-118575
ENSTRUG00000014743.1
H2UL68
klhl42
IUUC-Tru-118210
ENSTRUG00000014062.1
H2UGA1
klhl24a; klhl24
IUUC-Tru-118709
ENSTRUG00000013714.1
H2UDK7
klhl8
IUUC-Tru-118421
ENSTRUG00000012650.1
H2U504
enc3; LOC101061670
IUUC-Tru-118738
ENSTRUG00000012464.1
H2U3R3
KLHL28
IUUC-Tru-118448
ENSTRUG00000011704.1
H2TY04
klhl41b
IUUC-Tru-118563
ENSTRUG00000009978.1
H2TKA0
kbtbd7
IUUC-Tru-117814
ENSTRUG00000009673.1
H2THZ8
klhl17
IUUC-Tru-118490
ENSTRUG00000008923.1
H2TCP1
klhl21
IUUC-Tru-118682
ENSTRUG00000008889.1
H2TCF3
klhl7
IUUC-Tru-118132
ENSTRUG00000008549.1
H2T9S7
klhl18
IUUC-Tru-118457
ENSTRUG00000008522.1
H2T9L4
klhl40a; LOC101078126
IUUC-Tru-118288
ENSTRUG00000008272.1
H2T7P6
spopla; spopl
IUUC-Tru-117780
ENSTRUG00000008161.1
H2T6W6
KLHL4
IUUC-Tru-118692
ENSTRUG00000007338.1
H2T0D6
klhl20
IUUC-Tru-117546
ENSTRUG00000006927.1
H2SX76
KLHL12
IUUC-Tru-118510
ENSTRUG00000006769.1
H2SW38
kbtbd8
IUUC-Tru-118053
ENSTRUG00000005866.1
H2SPF9
KLHL29
IUUC-Tru-117644
ENSTRUG00000003855.1
H2S9L0
keap1b; keap1
IUUC-Tru-118099
ENSTRUG00000003125.1
H2S4K4
KBTBD12 (1 of many)
IUUC-Tru-118726
ENSTRUG00000002314.1
H2RYU9
klhl30
IUUC-Tru-117832
ENSTRUG00000001512.1
H2RTM1
spop