Tetraodon nigroviridis         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 36 genes.  Reviewed (0 or Unreviewed (36Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Tni-120221
ENSTNIG00000018925.1
H3DNL3
spop
IUUC-Tni-120648
ENSTNIG00000017980.1
H3DKU6
si:ch211-256e16.3
IUUC-Tni-120041
ENSTNIG00000017467.1
H3DJB4
KLHL28
IUUC-Tni-119845
ENSTNIG00000017201.1
H3DIJ4
keap1a
IUUC-Tni-120328
ENSTNIG00000016921.1
H3DHP6
klhl41a
IUUC-Tni-120794
ENSTNIG00000016776.1
H3DH95
KLHL4
IUUC-Tni-120381
ENSTNIG00000015521.1
H3DDJ9
enc3 (1 of many)
IUUC-Tni-120747
ENSTNIG00000015520.1
H3DDJ8
enc3 (1 of many)
IUUC-Tni-120462
ENSTNIG00000015284.1
H3DCV1
klhl24a
IUUC-Tni-120531
ENSTNIG00000015159.1
H3DCH1
klhl17
IUUC-Tni-120370
ENSTNIG00000013864.1
H3D8M7
rcbtb1
IUUC-Tni-120547
ENSTNIG00000013264.1
H3D6V8
klhl41b
IUUC-Tni-119776
ENSTNIG00000012736.1
H3D5C2
klhl40b
IUUC-Tni-119944
ENSTNIG00000012668.1
H3D553
klhl42
IUUC-Tni-119898
ENSTNIG00000012448.1
H3D4I0
klhl21
IUUC-Tni-120060
ENSTNIG00000011488.1
H3D1P7
klhl22
IUUC-Tni-120173
ENSTNIG00000011132.1
H3D0N1
kbtbd8
IUUC-Tni-119955
ENSTNIG00000010986.1
H3D080
spopla
IUUC-Tni-119908
ENSTNIG00000010720.1
H3CZF3
KLHL29
IUUC-Tni-119886
ENSTNIG00000010403.1
H3CYH5
si:ch211-253p14.2
IUUC-Tni-119722
ENSTNIG00000010053.1
H3CXG4
klhl13
IUUC-Tni-120002
ENSTNIG00000009498.1
H3CVT7
KLHL10 (1 of many)
IUUC-Tni-119756
ENSTNIG00000008693.1
H3CTF8
kbtbd2
IUUC-Tni-120080
ENSTNIG00000007926.1
H3CR62
klhl40a
IUUC-Tni-119988
ENSTNIG00000007535.1
H3CQ10
klhl8
IUUC-Tni-120888
ENSTNIG00000007399.1
H3CPM2
klhl3
IUUC-Tni-120247
ENSTNIG00000007148.1
H3CNW6
klhl30
IUUC-Tni-119698
ENSTNIG00000006751.1
H3CMQ5
klhl11
IUUC-Tni-120525
ENSTNIG00000004769.1
H3CGP7
KLHL25
IUUC-Tni-120245
ENSTNIG00000004541.1
H3CG13
keap1b
IUUC-Tni-120845
ENSTNIG00000004529.1
H3CFZ8
GAN (1 of many)
IUUC-Tni-119742
ENSTNIG00000004528.1
H3CFZ7
GAN (1 of many)
IUUC-Tni-120122
ENSTNIG00000004301.1
H3CFA6
klhl2
IUUC-Tni-120892
ENSTNIG00000003070.1
H3CBM0
klhl18
IUUC-Tni-120224
ENSTNIG00000002542.1
H3CA21
klhl7
IUUC-Tni-119999
ENSTNIG00000012476.1
H3BXB5
KLHL12