Astyanax mexicanus         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 35 genes.  Reviewed (0 or Unreviewed (35Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ame-011550
ENSAMXG00000025772.1
W5LTL3
socs1a
IUUC-Ame-010677
ENSAMXG00000025600.1
W5LT94
socs5b
IUUC-Ame-010732
ENSAMXG00000025302.1
W5LSQ3
socs9
IUUC-Ame-010859
ENSAMXG00000025210.1
W5LSL1
socs3b
IUUC-Ame-011790
ENSAMXG00000024966.1
W5LRX9
IUUC-Ame-011135
ENSAMXG00000024867.1
W5LRN0
socs6b
IUUC-Ame-010841
ENSAMXG00000024781.1
W5LRE4
spsb1
IUUC-Ame-010911
ENSAMXG00000020952.1
W5LP07
socs4
IUUC-Ame-011668
ENSAMXG00000020673.1
W5LN81
TCEB3C
IUUC-Ame-011571
ENSAMXG00000020181.1
W5LLR8
LRR1
IUUC-Ame-011301
ENSAMXG00000018378.1
W5LGG3
IUUC-Ame-011128
ENSAMXG00000018329.1
W5LGB8
asb1
IUUC-Ame-011456
ENSAMXG00000017575.1
W5LE28
rab40b
IUUC-Ame-011267
ENSAMXG00000015948.1
W5L9A5
socs2
IUUC-Ame-011755
ENSAMXG00000015403.1
W5L7N6
asb14b
IUUC-Ame-010976
ENSAMXG00000015387.1
W5L7M4
asb5a
IUUC-Ame-011455
ENSAMXG00000014472.1
W5L4Y8
asb4
IUUC-Ame-011273
ENSAMXG00000014211.1
W5L459
asb7
IUUC-Ame-011686
ENSAMXG00000013297.1
W5L1G8
asb12b
IUUC-Ame-011384
ENSAMXG00000013038.1
W5L0P9
MED8
IUUC-Ame-011074
ENSAMXG00000012759.1
W5KZV2
si:ch1073-342h5.2
IUUC-Ame-011115
ENSAMXG00000011632.1
W5KWJ1
asb3
IUUC-Ame-011162
ENSAMXG00000010781.1
W5KU11
spsb4b
IUUC-Ame-011270
ENSAMXG00000009172.1
W5KPB3
tmf1
IUUC-Ame-011381
ENSAMXG00000008149.1
W5KLB6
neurl2
IUUC-Ame-011076
ENSAMXG00000006876.1
W5KHJ3
IUUC-Ame-011522
ENSAMXG00000006863.1
W5KHI4
asb2a.1
IUUC-Ame-010730
ENSAMXG00000006169.1
W5KFG9
spsb4a
IUUC-Ame-011150
ENSAMXG00000004021.1
W5K955
asb14a
IUUC-Ame-011590
ENSAMXG00000003652.1
W5K822
asb15b
IUUC-Ame-010739
ENSAMXG00000002972.1
W5K618
asb8
IUUC-Ame-011203
ENSAMXG00000002591.1
W5K4Z0
rab40c
IUUC-Ame-010787
ENSAMXG00000002475.1
W5K4M4
cish
IUUC-Ame-011818
ENSAMXG00000002179.1
W5K3R3
vhl
IUUC-Ame-011780
ENSAMXG00000000807.1
W5JZR0
fem1b