Ciona intestinalis         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 11 genes.  Reviewed (0 or Unreviewed (11Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Cin-025608
ENSCING00000020648.1
H2XQ87
LOC100179320
IUUC-Cin-025368
ENSCING00000025109.1
H2Y3H8
IUUC-Cin-025660
ENSCING00000020383.1
H2XVK4
LOC100186173
IUUC-Cin-025505
ENSCING00000022669.1
H2XQ20
IUUC-Cin-025737
ENSCING00000005061.3
F6ZRE8
meta3
IUUC-Cin-025726
ENSCING00000016010.2
F6VVF6
IUUC-Cin-025413
ENSCING00000009026.3
F6R801
socs6
IUUC-Cin-025183
ENSCING00000008150.3
F6VFN8
IUUC-Cin-025570
ENSCING00000005596.3
F6U3A5
LOC100185580
IUUC-Cin-025556
ENSCING00000004138.3
F6UIM4
LOC100182348
IUUC-Cin-025461
ENSCING00000000297.3
F6ZGS0