Latimeria chalumnae         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 35 genes.  Reviewed (0 or Unreviewed (35Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Lch-050022
ENSLACG00000013302.2
M3XHU9
SPSB4
IUUC-Lch-049921
ENSLACG00000015956.2
M3XL02
LRR1
IUUC-Lch-050156
ENSLACG00000019093.2
H3BIK8
ASB8
IUUC-Lch-049459
ENSLACG00000019050.1
H3BIG0
SOCS4
IUUC-Lch-050327
ENSLACG00000018723.1
H3BHD5
NEURL2
IUUC-Lch-050463
ENSLACG00000018618.1
H3BH22
vhl; LOC102364581
IUUC-Lch-049768
ENSLACG00000017987.1
H3BEZ4
SOCS7
IUUC-Lch-050335
ENSLACG00000017743.1
H3BE67
ASB7
IUUC-Lch-050555
ENSLACG00000017665.2
H3BDX8
CISH
IUUC-Lch-049550
ENSLACG00000017388.1
H3BD06
WSB1
IUUC-Lch-049510
ENSLACG00000017308.1
H3BCR4
SOCS3
IUUC-Lch-050131
ENSLACG00000016885.1
H3BBC3
WSB2
IUUC-Lch-049561
ENSLACG00000016672.1
H3BAN0
ASB16
IUUC-Lch-050001
ENSLACG00000015734.2
H3B7I9
ASB12
IUUC-Lch-050193
ENSLACG00000014606.2
H3B3V2
RAB40C
IUUC-Lch-049583
ENSLACG00000014315.2
H3B2X8
SPSB1
IUUC-Lch-049701
ENSLACG00000014224.2
H3B2M8
TMF1
IUUC-Lch-049927
ENSLACG00000012935.1
H3AYH8
ASB1
IUUC-Lch-050248
ENSLACG00000012259.1
H3AWA3
ASB15
IUUC-Lch-050636
ENSLACG00000011486.1
H3ATR3
socs9; LOC102350225
IUUC-Lch-049522
ENSLACG00000011418.1
H3ATJ3
ASB14
IUUC-Lch-050601
ENSLACG00000008918.1
H3AKE5
ASB6
IUUC-Lch-050219
ENSLACG00000008241.1
H3AI70
SOCS1
IUUC-Lch-049957
ENSLACG00000008237.2
H3AI65
PIGA
IUUC-Lch-050315
ENSLACG00000007891.1
H3AH14
asb3; ASB3
IUUC-Lch-049860
ENSLACG00000007696.1
H3AGD7
ASB9
IUUC-Lch-050354
ENSLACG00000006118.1
H3AB71
SOCS6
IUUC-Lch-050160
ENSLACG00000005775.1
H3AA44
SOCS2
IUUC-Lch-050513
ENSLACG00000004254.1
H3A565
ASB18
IUUC-Lch-050369
ENSLACG00000003992.1
H3A4B5
IUUC-Lch-050470
ENSLACG00000003150.1
H3A1L3
ASB2
IUUC-Lch-049686
ENSLACG00000002644.1
H2ZZY4
SOCS5
IUUC-Lch-049994
ENSLACG00000002358.1
H2ZZ15
MED8
IUUC-Lch-049773
ENSLACG00000000695.1
H2ZTQ4
FEM1B
IUUC-Lch-049996
ENSLACG00000000481.1
H2ZT21
ASB4