Oreochromis niloticus         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 34 genes.  Reviewed (0 or Unreviewed (34Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ont-072406
ENSONIG00000021386.1
I3KZZ1
socs3a; socs3; SOCS3
IUUC-Ont-072537
ENSONIG00000021059.1
I3KZ15
socs9; LOC100693056
IUUC-Ont-071619
ENSONIG00000020753.1
I3KY62
socs4
IUUC-Ont-072173
ENSONIG00000020647.1
I3KXV6
socs1
IUUC-Ont-072299
ENSONIG00000020613.1
I3KXS2
socs5a; socs5
IUUC-Ont-072498
ENSONIG00000020421.1
I3KX80
SOCS6
IUUC-Ont-071378
ENSONIG00000020346.1
I3KWZ6
tmf1
IUUC-Ont-072451
ENSONIG00000019799.1
I3KUX9
neurl2
IUUC-Ont-071344
ENSONIG00000019227.1
I3KSV4
MED8
IUUC-Ont-072397
ENSONIG00000019089.1
I3KSD5
rab40b
IUUC-Ont-071807
ENSONIG00000019053.1
I3KS91
asb3; LOC100711123
IUUC-Ont-071332
ENSONIG00000019048.1
I3KS85
vhl
IUUC-Ont-071890
ENSONIG00000018883.1
I3KRN3
cishb; LOC100710219
IUUC-Ont-071866
ENSONIG00000018845.1
I3KRI4
RAB40C (1 of many)
IUUC-Ont-071579
ENSONIG00000017746.1
I3KMM9
TCEB3
IUUC-Ont-072016
ENSONIG00000017532.1
I3KLW2
asb12b; asb12
IUUC-Ont-072570
ENSONIG00000016027.1
I3KGE5
ASB9
IUUC-Ont-071823
ENSONIG00000014616.1
I3KBA5
spsb4a; spsb4
IUUC-Ont-071639
ENSONIG00000011904.1
I3K1J3
asb8
IUUC-Ont-071779
ENSONIG00000011775.1
I3K128
asb15b; asb15
IUUC-Ont-071911
ENSONIG00000010935.1
I3JY12
asb6
IUUC-Ont-071845
ENSONIG00000010780.1
I3JXF8
asb4
IUUC-Ont-072598
ENSONIG00000010592.1
I3JWS2
fem1b
IUUC-Ont-072546
ENSONIG00000010430.1
I3JW65
spsb4b; LOC100701786
IUUC-Ont-071248
ENSONIG00000009462.1
I3JSP4
rab40c
IUUC-Ont-072275
ENSONIG00000009267.1
I3JS11
SOCS7
IUUC-Ont-072340
ENSONIG00000007523.1
I3JKU5
socs2; SOCS2
IUUC-Ont-072198
ENSONIG00000004473.1
I3J9U2
asb1
IUUC-Ont-071371
ENSONIG00000004299.1
I3J979
asb14a; asb14
IUUC-Ont-072349
ENSONIG00000003701.1
I3J714
LRR1
IUUC-Ont-071692
ENSONIG00000002449.1
I3J2H4
spsb1
IUUC-Ont-072370
ENSONIG00000000816.1
I3IWP9
asb16
IUUC-Ont-071648
ENSONIG00000000231.1
I3IUK6
asb2a.1
IUUC-Ont-072258
ENSONIG00000000114.1
I3IU51
socs7