Poecilia formosa         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 37 genes.  Reviewed (0 or Unreviewed (37Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pfo-097038
ENSPFOG00000002663.2
A0A096MI64
asb3
IUUC-Pfo-096806
ENSPFOG00000011709.2
A0A096LQD8
asb14a
IUUC-Pfo-097179
ENSPFOG00000022189.1
A0A096M4L4
SOCS6
IUUC-Pfo-097073
ENSPFOG00000020922.2
A0A087YSP1
socs2
IUUC-Pfo-096412
ENSPFOG00000020709.1
A0A087YS30
socs3a
IUUC-Pfo-097139
ENSPFOG00000020313.1
A0A087YQY6
socs9
IUUC-Pfo-096930
ENSPFOG00000019960.1
A0A087YPY4
socs5a
IUUC-Pfo-096313
ENSPFOG00000019061.2
A0A087YMB7
cishb
IUUC-Pfo-097132
ENSPFOG00000018998.1
A0A087YM69
asb5a
IUUC-Pfo-096198
ENSPFOG00000017749.1
A0A087YII3
asb6 (1 of many)
IUUC-Pfo-097338
ENSPFOG00000016288.2
A0A087YEC1
asb15b
IUUC-Pfo-096659
ENSPFOG00000016252.1
A0A087YE62
MED8
IUUC-Pfo-096274
ENSPFOG00000013953.1
A0A087Y7Q8
spsb1 (1 of many)
IUUC-Pfo-096383
ENSPFOG00000013137.2
A0A087Y533
asb8
IUUC-Pfo-097100
ENSPFOG00000013037.1
A0A087Y4V9
socs7
IUUC-Pfo-097113
ENSPFOG00000012033.2
A0A087Y225
asb4
IUUC-Pfo-096386
ENSPFOG00000011219.1
A0A087XZU9
tmf1
IUUC-Pfo-097228
ENSPFOG00000010372.1
A0A087XX27
asb7
IUUC-Pfo-096482
ENSPFOG00000009932.2
A0A087XVU5
asb2a.1
IUUC-Pfo-097501
ENSPFOG00000009693.1
A0A087XV36
SOCS1 (1 of many)
IUUC-Pfo-097480
ENSPFOG00000009160.2
A0A087XTS7
SOCS7
IUUC-Pfo-096756
ENSPFOG00000009206.2
A0A087XTQ3
socs4
IUUC-Pfo-096646
ENSPFOG00000008391.1
A0A087XRF6
spsb4a
IUUC-Pfo-096235
ENSPFOG00000007613.1
A0A087XP23
spsb4b
IUUC-Pfo-096264
ENSPFOG00000006911.2
A0A087XM86
wsb1
IUUC-Pfo-096187
ENSPFOG00000006359.1
A0A087XKL8
RAB40C (1 of many)
IUUC-Pfo-097085
ENSPFOG00000006249.1
A0A087XK45
asb12b
IUUC-Pfo-097105
ENSPFOG00000005322.1
A0A087XHQ6
rab40c
IUUC-Pfo-096238
ENSPFOG00000005324.1
A0A087XHN5
rab40b
IUUC-Pfo-096494
ENSPFOG00000005163.1
A0A087XH47
LRR1
IUUC-Pfo-096952
ENSPFOG00000003984.2
A0A087XDI3
neurl2
IUUC-Pfo-097334
ENSPFOG00000003464.2
A0A087XCD3
TCEB3
IUUC-Pfo-096177
ENSPFOG00000003490.2
A0A087XC32
asb14b
IUUC-Pfo-096892
ENSPFOG00000002802.1
A0A087XA93
vhl
IUUC-Pfo-096445
ENSPFOG00000002157.2
A0A087X8D8
asb1
IUUC-Pfo-097181
ENSPFOG00000001589.2
A0A087X6U9
IUUC-Pfo-096128
ENSPFOG00000000221.1
A0A087X354
fem1b