Populus trichocarpa         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 5 genes.  Reviewed (0 or Unreviewed (5Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Pop-100072
POPTR_1333s00200
U7DTC9
POPTRDRAFT_592134; POPTR_1333s00200g
IUUC-Pop-099683
POPTR_0012s05550
A9P8K1
POPTRDRAFT_569847; POPTR_0012s05560g
IUUC-Pop-100048
POPTR_0009s08690
B9HN41
POPTRDRAFT_557561; POPTR_0009s08690g
IUUC-Pop-098820
POPTR_0003s20980
B9GY58
POPTR_0003s20980g
IUUC-Pop-099005
POPTR_0001s18570
B9GG46
POPTR_0001s18570g