Sus scrofa         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 33 genes.  Reviewed (0 or Unreviewed (33Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ssc-115817
ENSSSCG00000012132.3
K7GN41
ASB9
IUUC-Ssc-115680
ENSSSCG00000022419.1
I3L6T4
FEM1B
IUUC-Ssc-115571
ENSSSCG00000024839.1
I3LUW8
IUUC-Ssc-115430
ENSSSCG00000028303.1
I3LAZ3
SPSB4
IUUC-Ssc-115722
ENSSSCG00000029772.1
I3LBY4
SOCS3
IUUC-Ssc-116004
ENSSSCG00000027855.1
E7CR04
SOCS1; socs1
IUUC-Ssc-115687
ENSSSCG00000025460.1
F1SLT6
SPSB2
IUUC-Ssc-115875
ENSSSCG00000025440.1
I3LRU2
TCEB3
IUUC-Ssc-116033
ENSSSCG00000021024.1
I3LRC3
ASB8
IUUC-Ssc-116369
ENSSSCG00000018057.2
E7CUK3
SOCS7; socs7
IUUC-Ssc-116440
ENSSSCG00000017752.2
F1RJ54
WSB1
IUUC-Ssc-115719
ENSSSCG00000017129.2
F1S008
RAB40B
IUUC-Ssc-115956
ENSSSCG00000016606.2
F1SLY3
ASB15
IUUC-Ssc-115713
ENSSSCG00000016340.2
F1SIU7
ASB1
IUUC-Ssc-115480
ENSSSCG00000016318.2
F1SM12
ASB18
IUUC-Ssc-115943
ENSSSCG00000015333.2
F1SF90
ASB4
IUUC-Ssc-116245
ENSSSCG00000012133.3
F1SQU6
ASB11
IUUC-Ssc-115973
ENSSSCG00000011567.2
F1SQC3
VHLL
IUUC-Ssc-115826
ENSSSCG00000011510.2
F1SFP6
TMF1
IUUC-Ssc-115922
ENSSSCG00000011414.3
F1SJ17
IUUC-Ssc-115643
ENSSSCG00000009853.2
F1RKG5
WSB2
IUUC-Ssc-115985
ENSSSCG00000008437.2
E5F1H9
SOCS5
IUUC-Ssc-115429
ENSSSCG00000008415.2
F1SQJ4
ASB3
IUUC-Ssc-115387
ENSSSCG00000007430.2
F1SC72
NEURL2
IUUC-Ssc-116376
ENSSSCG00000005679.2
A5PH53
ASB6; ASB6v1
IUUC-Ssc-115821
ENSSSCG00000005053.2
E2IKQ8
SOCS4; socs4
IUUC-Ssc-116378
ENSSSCG00000005004.2
F1SHZ7
LRR1
IUUC-Ssc-115343
ENSSSCG00000004878.1
C9DRN1
SOCS6
IUUC-Ssc-115855
ENSSSCG00000004821.2
F2Z5S9
ASB7
IUUC-Ssc-115563
ENSSSCG00000003943.2
F1S313
MED8
IUUC-Ssc-115559
ENSSSCG00000003904.2
F1S3V9
LRRC41
IUUC-Ssc-116227
ENSSSCG00000002467.2
F1SCH0
ASB2
IUUC-Ssc-115252
ENSSSCG00000000910.2
Q7YRV6
SOCS2