Takifugu rubripes         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 29 genes.  Reviewed (0 or Unreviewed (29Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Tru-117643
ENSTRUG00000016884.1
H2V230
neurl2
IUUC-Tru-118046
ENSTRUG00000016674.1
H2V0C1
asb16
IUUC-Tru-118003
ENSTRUG00000016630.1
H2V005
MED8
IUUC-Tru-117639
ENSTRUG00000016616.1
H2UZX2
asb15b; LOC101068860
IUUC-Tru-117954
ENSTRUG00000016113.1
H2UW60
asb2a.1
IUUC-Tru-117879
ENSTRUG00000015951.1
H2UV11
asb4
IUUC-Tru-118207
ENSTRUG00000015930.1
H2UUU8
asb8
IUUC-Tru-117781
ENSTRUG00000015433.1
H2UR85
socs4
IUUC-Tru-118757
ENSTRUG00000014653.1
H2UKG2
fem1b
IUUC-Tru-117605
ENSTRUG00000014146.1
H2UGX1
RAB40C (1 of many)
IUUC-Tru-118303
ENSTRUG00000013544.1
H2UC90
LRR1
IUUC-Tru-118511
ENSTRUG00000012004.1
H2U0C1
cishb; socs8
IUUC-Tru-118428
ENSTRUG00000011640.1
Q2LD51
socs3
IUUC-Tru-118654
ENSTRUG00000011319.1
H2TV67
vhl; LOC101068717
IUUC-Tru-118090
ENSTRUG00000010558.1
Q0GRC3
socs1; SOCS1
IUUC-Tru-118229
ENSTRUG00000010266.1
H2TMD5
asb6
IUUC-Tru-117578
ENSTRUG00000009477.1
H2TGL5
ASB9
IUUC-Tru-118441
ENSTRUG00000009215.1
H2TET3
socs5a
IUUC-Tru-118256
ENSTRUG00000008088.1
H2T679
spsb1; LOC101069587
IUUC-Tru-118552
ENSTRUG00000006377.1
H2ST31
asb2b
IUUC-Tru-118293
ENSTRUG00000006121.1
H2SR38
asb1
IUUC-Tru-118185
ENSTRUG00000006010.1
H2SQD5
asb12b; asb12
IUUC-Tru-117915
ENSTRUG00000005884.1
H2SPJ5
tmf1
IUUC-Tru-118408
ENSTRUG00000004831.1
H2SGL2
asb14a
IUUC-Tru-117881
ENSTRUG00000004133.1
H2SBK6
TCEB3
IUUC-Tru-118561
ENSTRUG00000002275.1
H2RYL7
asb7
IUUC-Tru-118264
ENSTRUG00000002192.1
H2RY15
rab40c; LOC101073962
IUUC-Tru-117562
ENSTRUG00000000648.1
H2RN34
SOCS7
IUUC-Tru-118631
ENSTRUG00000000282.1
H2RKF6
spsb4b; spsb4