Tetraodon nigroviridis         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 33 genes.  Reviewed (0 or Unreviewed (33Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Tni-119905
ENSTNIG00000018804.1
H3DN88
socs4 (1 of many)
IUUC-Tni-120083
ENSTNIG00000018484.1
H3DMB0
asb15b
IUUC-Tni-119992
ENSTNIG00000017790.1
H3DK96
zgc:111986
IUUC-Tni-120529
ENSTNIG00000017499.1
H3DJE7
asb14a
IUUC-Tni-120292
ENSTNIG00000017320.1
H3DIW4
LRR1
IUUC-Tni-120436
ENSTNIG00000017094.1
H3DI84
socs5a
IUUC-Tni-120054
ENSTNIG00000000074.1
H3DEB8
asb12b
IUUC-Tni-120305
ENSTNIG00000015152.1
H3DCG3
spsb1
IUUC-Tni-120699
ENSTNIG00000015108.1
H3DCC0
asb8
IUUC-Tni-119837
ENSTNIG00000014769.1
H3DBB5
cish
IUUC-Tni-120160
ENSTNIG00000014317.1
H3D9Z2
spsb4a
IUUC-Tni-120408
ENSTNIG00000013910.1
H3D8S4
asb11
IUUC-Tni-120261
ENSTNIG00000013408.1
H3D7B1
asb6
IUUC-Tni-119965
ENSTNIG00000012902.1
H3D5T8
neurl2
IUUC-Tni-120559
ENSTNIG00000012082.1
Q4S7P3
RAB40C (1 of many); GSTENG00022691001
IUUC-Tni-120325
ENSTNIG00000011333.1
H3D190
TCEB3
IUUC-Tni-120350
ENSTNIG00000011295.1
H3D148
rab40c
IUUC-Tni-120157
ENSTNIG00000011126.1
H3D0M5
tmf1
IUUC-Tni-120751
ENSTNIG00000011084.1
H3D0I3
spsb4b
IUUC-Tni-119810
ENSTNIG00000008891.1
H3CU10
asb1
IUUC-Tni-119829
ENSTNIG00000008172.1
Q4SMX3
SOCS6; GSTENG00015551001
IUUC-Tni-120624
ENSTNIG00000007153.1
H3CNX1
MED8
IUUC-Tni-120352
ENSTNIG00000006695.1
Q4STS3
asb7; GSTENG00012806001
IUUC-Tni-120793
ENSTNIG00000006291.1
H3CLC2
IUUC-Tni-120263
ENSTNIG00000006108.1
B0EVN8
socs2; SOCS2
IUUC-Tni-119961
ENSTNIG00000019576.1
H3CC17
SOCS7
IUUC-Tni-120735
ENSTNIG00000002674.1
H3CAF6
fem1b
IUUC-Tni-120065
ENSTNIG00000002432.1
H3C9N1
socs4 (1 of many)
IUUC-Tni-120849
ENSTNIG00000001985.1
H3C815
asb4
IUUC-Tni-120590
ENSTNIG00000000237.1
H3C1X4
socs3a
IUUC-Tni-120099
ENSTNIG00000000165.1
H3C1R2
IUUC-Tni-120719
ENSTNIG00000001079.1
Q155E5
SOCS1
IUUC-Tni-120453
ENSTNIG00000000041.1
H3C1Y9
asb14b