Xiphophorus maculatus         E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box


※ E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box family introduction

    SOCS/VHL/BC-box represents a family that comprises SOCS proteins, VHL proteins and only BC-box containing proteins. The BC-box is a sub-domain that exists in both the SOCS and VHL domains and facilitates binding to the Elongin-B/C complex. SOCS is an ~80-residue domain named "Supressors Of Cytokine Signaling", which is located in the C-terminus and specifically recognize and bind a substrate. VHL is named "Von-Hippel Lindau", which forms the core of a large BCR E3 ubiquitin ligase complex. Compared to the SOCS domain, VHL lacks a C-terminal sequence (downstream of the BC-box) of the SOCS. VHL protein specifically interacts with endogenous Cul2-Rbx1 in mammalian cells. VHL or SOCS can serve as a substrate recognition subunit and form a BCR ubiquitin ligase complex, which targets the substrates for proteasome degradation (1).

1. Kamura, T., Maenaka, K., Kotoshiba, S., Matsumoto, M., Kohda, D., Conaway, R.C., Conaway, J.W. and Nakayama, K.I. (2004). VHL-box and SOCS-box domains determine binding specificity for Cul2-Rbx1 and Cul5-Rbx2 modules of ubiquitin ligases. Genes Dev., 18, 3055-3065. PMID: 15601820




There are 37 genes.  Reviewed (0 or Unreviewed (37Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Xma-133920
ENSXMAG00000020189.1
M4B0J1
socs4
IUUC-Xma-133904
ENSXMAG00000020161.1
M4B0G3
SOCS6
IUUC-Xma-133243
ENSXMAG00000020101.1
M4B0A3
SOCS1 (1 of many)
IUUC-Xma-133564
ENSXMAG00000019827.1
M4AZH9
socs5a
IUUC-Xma-133660
ENSXMAG00000019579.1
M4AYT1
socs9
IUUC-Xma-133336
ENSXMAG00000018887.1
M4AWS2
spsb4b
IUUC-Xma-133509
ENSXMAG00000018781.1
M4AWH5
SOCS7
IUUC-Xma-134231
ENSXMAG00000016951.1
M4AR86
cish
IUUC-Xma-134218
ENSXMAG00000016902.1
M4AR52
rab40b
IUUC-Xma-133858
ENSXMAG00000016354.1
M4API7
TCEB3
IUUC-Xma-133079
ENSXMAG00000014313.1
M4AIP3
socs7
IUUC-Xma-133565
ENSXMAG00000014292.1
M4AIL9
asb3
IUUC-Xma-133687
ENSXMAG00000013138.1
M4AFC6
rab40c
IUUC-Xma-134261
ENSXMAG00000012512.1
M4ADI1
socs3a
IUUC-Xma-134210
ENSXMAG00000012096.1
M4ACD2
wsb1
IUUC-Xma-133397
ENSXMAG00000011098.1
M4A9H4
IUUC-Xma-133640
ENSXMAG00000010950.1
M4A933
LRR1
IUUC-Xma-133014
ENSXMAG00000010518.1
M4A7U2
asb8
IUUC-Xma-133623
ENSXMAG00000010496.1
M4A7S6
tmf1
IUUC-Xma-133508
ENSXMAG00000009834.1
M4A5V6
spsb1
IUUC-Xma-134006
ENSXMAG00000009578.1
M4A554
fem1b
IUUC-Xma-134178
ENSXMAG00000008361.1
M4A1N8
spsb4a
IUUC-Xma-133786
ENSXMAG00000008279.1
M4A1F5
asb16
IUUC-Xma-133577
ENSXMAG00000007858.1
M4A094
asb14a
IUUC-Xma-133977
ENSXMAG00000007562.1
M3ZZE3
asb2a.1
IUUC-Xma-134236
ENSXMAG00000006684.1
M3ZWV6
asb12b
IUUC-Xma-134285
ENSXMAG00000006328.1
M3ZVV0
MED8
IUUC-Xma-133376
ENSXMAG00000004660.1
M3ZR25
RAB40C (1 of many)
IUUC-Xma-134242
ENSXMAG00000004342.1
M3ZQ69
ASB9
IUUC-Xma-133169
ENSXMAG00000002275.1
M3ZJ85
asb5a
IUUC-Xma-133853
ENSXMAG00000002068.1
M3ZIM4
asb1
IUUC-Xma-132981
ENSXMAG00000001904.1
M3ZI59
vhl
IUUC-Xma-134170
ENSXMAG00000001275.1
M3ZGE6
asb7
IUUC-Xma-134094
ENSXMAG00000000714.1
M3ZES3
asb4
IUUC-Xma-133776
ENSXMAG00000000146.1
M3ZD49
neurl2
IUUC-Xma-134320
ENSXMAG00000000141.1
M3ZD46
asb6
IUUC-Xma-133461
ENSXMAG00000000116.1
M3ZD24
asb15b