Arabidopsis thaliana         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 16 genes.  Reviewed (13 or Unreviewed (3Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Ath-007398
AT5G63160
Q9FMK7
BT1; At5g63160; MDC12.13
IUUC-Ath-006930
AT5G48510
Q9LV63
At5g48510; MJE7.15
IUUC-Ath-006582
AT5G45110
Q8L746
NPR3; At5g45110; K17O22_11
IUUC-Ath-007368
AT5G21010
Q1EBV6
BPM5; At5g21010; F22D1; T10F18.30
IUUC-Ath-007503
AT4G37610
Q6EJ98
BT5; At4g37610; F19F18.100
IUUC-Ath-007697
AT4G19660
Q5ICL9
NPR4; At4g19660; T16H5.20
IUUC-Ath-007687
AT3G48360
Q94BN0
BT2; At3g48360; T29H11.120
IUUC-Ath-006643
AT3G43700
A1L4W5
BPM6; At3g43700; F23N14_80
IUUC-Ath-006927
AT3G03740
Q9SRV1
BPM4; At3g03740; F20H23.23
IUUC-Ath-007670
AT2G39760
O22286
BPM3; At2g39760; T5I7.6
IUUC-Ath-006864
AT1G21780
Q9XHZ8
At1g21780; F8K7.22
IUUC-Ath-006903
AT1G05690
Q9SYL0
BT3; At1g05690; F3F20.14
IUUC-Ath-006771
AT1G01640
Q9LQ95
At1g01640; T1N6.2
IUUC-Ath-006725
AT5G67480
Q9FJX5
BT4; At5g67480; K9I9.4
IUUC-Ath-007066
AT5G01660
F4K9G6
At5g01660; F7A7.180; F7A7_180
IUUC-Ath-007161
AT1G55760
Q680K8
At1g55760; F20N2.15