Oryza indica         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 32 genes.  Reviewed (0 or Unreviewed (32Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Oin-079719
BGIOSGA040693
IUUC-Oin-079833
BGIOSGA032990
IUUC-Oin-080165
BGIOSGA032986
IUUC-Oin-079537
BGIOSGA032982
IUUC-Oin-080136
BGIOSGA032977
IUUC-Oin-079648
BGIOSGA032962
IUUC-Oin-079807
BGIOSGA031885
IUUC-Oin-079524
BGIOSGA031881
IUUC-Oin-079902
BGIOSGA031878
IUUC-Oin-079238
BGIOSGA028914
IUUC-Oin-079051
BGIOSGA028229
IUUC-Oin-079941
BGIOSGA028228
IUUC-Oin-079730
BGIOSGA028223
IUUC-Oin-079078
BGIOSGA028196
IUUC-Oin-079666
BGIOSGA027925
IUUC-Oin-080125
BGIOSGA027922
IUUC-Oin-079435
BGIOSGA027428
IUUC-Oin-080157
BGIOSGA027417
IUUC-Oin-079976
BGIOSGA026996
IUUC-Oin-079117
BGIOSGA026639
IUUC-Oin-080132
BGIOSGA026637
IUUC-Oin-080052
BGIOSGA026631
IUUC-Oin-079832
BGIOSGA024985
IUUC-Oin-080100
BGIOSGA024156
IUUC-Oin-079630
BGIOSGA021530
IUUC-Oin-079847
BGIOSGA017177
IUUC-Oin-079968
BGIOSGA013711
IUUC-Oin-079694
BGIOSGA009921
IUUC-Oin-079364
BGIOSGA002488
IUUC-Oin-079973
BGIOSGA002325
IUUC-Oin-079395
BGIOSGA001717
IUUC-Oin-079881
BGIOSGA001714