Oryza rufipogon         E3 adaptor/Cullin RING/BCR/BTB_3-box


※ E3 adaptor/Cullin RING/BCR/BTB_3-box family introduction

    BTB (also known as POZ) was first identified as a conserved motif presented in the Drosophila melanogaster Bric-a-Brac, Tramtrack, Broad complex transcription regulators (1). BTB, Cul3 and RBX1 form a Cul3-based ligase (BCR), which targets substrates for ubiquitin-dependent degradation by the 26S proteasome. As a substrate recognition subunit of Cul3-based ligase, the member of BTB family can bridge the Cul3 to the substrate in a single polypeptide (2,3). Recently, it was observed that a 3-box is responsible for the Cul3-interacting in a variety of BTB proteins including almost all of BTB-Kelch and MATH-BTB proteins (4). Here we defined the BTB_3-box family as the proteins contain both BTB domain and 3-box domain. BTB-containing proteins are highly conserved and participate in diverse biological processes, including transcriptional regulation, ion channel assembly and gating, cytoskeleton dynamics, and targeting proteins for ubiquitination (1).

1. Stogios, P.J., Downs, G.S., Jauhal, J.J., Nandra, S.K. and Prive, G.G. (2005). Sequence and structural analysis of BTB domain proteins. Genome Biol., 6, R82. PMID: 16207353

2. Xu, L., Wei, Y., Reboul, J., Vaglio, P., Shin, T.H., Vidal, M., Elledge, S.J. and Harper, J.W. (2003). BTB proteins are substrate-specific adaptors in an SCF-like modular ubiquitin ligase containing CUL-3. Nature, 425, 316-321. PMID: 13679922

3. Pintard, L., Willems, A. and Peter, M. (2004). Cullin-based ubiquitin ligases: Cul3-BTB complexes join the family. EMBO J., 23, 1681-1687. PMID: 15071497

4. Zhuang, M., Calabrese, M.F., Liu, J., Waddell, M.B., Nourse, A., Hammel, M., Miller, D.J., Walden, H., Duda, D.M., Seyedin, S.N., Hoggard, T., Harper, J. W., White, K. P. and Schulman, B. A.. (2009). Structures of SPOP-substrate complexes: insights into molecular architectures of BTB-Cul3 ubiquitin ligases. Mol. Cell, 36(1): 39-50. PMID: 19818708




There are 29 genes.  Reviewed (0 or Unreviewed (29Download the gene list
StatusiUUCD IDEnsemble Gene IDUniProt AccessionGene Name
IUUC-Oru-084234
ORUFI11G22170
A0A0E0RB73
IUUC-Oru-084825
ORUFI11G22130
A0A0E0RB69
IUUC-Oru-085185
ORUFI11G22110
A0A0E0RB66
IUUC-Oru-084195
ORUFI11G21540
A0A0E0RB01
IUUC-Oru-084983
ORUFI10G11550
A0A0E0QZI0
IUUC-Oru-085175
ORUFI10G11230
A0A0E0QZD7
IUUC-Oru-085214
ORUFI10G11180
A0A0E0QZD0
IUUC-Oru-084910
ORUFI10G11160
A0A0E0QZC8
IUUC-Oru-084595
ORUFI10G11150
A0A0E0QZC7
IUUC-Oru-084721
ORUFI10G11140
A0A0E0QZC6
IUUC-Oru-085186
ORUFI10G11100
A0A0E0QZC2
IUUC-Oru-084862
ORUFI10G11080
A0A0E0QZB7
IUUC-Oru-084615
ORUFI10G11060
A0A0E0QZB2
IUUC-Oru-084805
ORUFI10G11050
A0A0E0QZB1
IUUC-Oru-084297
ORUFI08G21400
A0A0E0QKN2
IUUC-Oru-084424
ORUFI08G07610
A0A0E0QFW2
IUUC-Oru-085258
ORUFI08G07540
A0A0E0QFV5
IUUC-Oru-084513
ORUFI08G07520
A0A0E0QFV2
IUUC-Oru-085247
ORUFI08G07490
A0A0E0QFU9
IUUC-Oru-084713
ORUFI08G02060
A0A0E0QDX3
IUUC-Oru-084605
ORUFI08G02030
A0A0E0QDX0
IUUC-Oru-084463
ORUFI07G00140
A0A0E0Q330
IUUC-Oru-084255
ORUFI06G25940
A0A0E0Q1D9
IUUC-Oru-084428
ORUFI06G25930
A0A0E0Q1D8
IUUC-Oru-084811
ORUFI06G09880
A0A0E0PVV8
IUUC-Oru-084905
ORUFI04G27660
A0A0E0PEC1
IUUC-Oru-084966
ORUFI04G14290
A0A0E0P9C7
IUUC-Oru-085193
ORUFI03G38580
A0A0E0P2E1
IUUC-Oru-084282
ORUFI02G14050
A0A0E0NDN2