| SNP - dbSNP |
| dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
|---|
| rs775440548 | snp | A/G | | | intron-variant | BAP1 | GRCh38.p7 | 3:52407520 | GGTAGGACTATGGGT[A/G]GAAGGCAAAGCTTCA | 8314 |
| rs775451516 | snp | C/T | 1.66902e-05 | 0.00288874 | splice-donor-variant | BAP1 | GRCh38.p7 | 3:52407957 | AGGCACTGCAGCCTA[C/T]CTCAGGGCTGAAACC | 8314 |
| rs775467563 | snp | G/T | | | intron-variant | BAP1 | GRCh38.p7 | 3:52403990 | TCCCGACCTCCAGGG[G/T]CTGACCCTAAAACTC | 8314 |
| rs775474716 | snp | G/T | 1.64814e-05 | 0.00287061 | intron-variant | BAP1 | GRCh38.p7 | 3:52407479 | CGGGGAAGAAAATAA[G/T]GCCGTATCAGAATAA | 8314 |
| rs775502802 | snp | C/G | 1.65072e-05 | 0.00287286 | intron-variant | BAP1 | GRCh38.p7 | 3:52405089 | CAAGTAGAGAATCCT[C/G]CAAGGGTGCTCCCAG | 8314 |
| rs775760293 | snp | C/T | 1.65556e-05 | 0.00287707 | missense | BAP1 | GRCh38.p7 | 3:52403650 | TGAAAGCACTGCCGA[C/T]CTCAGAGGCCGTGTC | 8314 |
| rs775789477 | snp | A/G | 8.26248e-05 | 0.00642694 | missense | BAP1 | GRCh38.p7 | 3:52403593 | CAGGGCTGGAGGGCC[A/G]CGTCGGGTTGGCTGA | 8314 |
| rs775815421 | snp | A/G | 0.000198876 | 0.00996989 | intron-variant | BAP1 | GRCh38.p7 | 3:52402473 | TGCCTCAGGCCAGGA[A/G]CTGAGGCTCTCATGG | 8314 |
| rs775836183 | snp | A/G | | | missense | BAP1 | GRCh38.p7 | 3:52407314 | AGGTGGCGTGGCTCG[A/G]GCCTGGGGAAAAACA | 8314 |
| rs775945831 | snp | A/G | 1.92188e-05 | 0.00309984 | intron-variant | BAP1 | GRCh38.p7 | 3:52402986 | CCTATCAAGGCCCCT[A/G]CCACCACCCAACCCA | 8314 |
| rs776102639 | snp | C/G | 2.13199e-05 | 0.00326489 | upstream-variant-2KB, synonymous-codon | PHF7, BAP1 | GRCh38.p7 | 3:52408555 | AGAGACCTTTCGCCG[C/G]GACCGGCGCTCTTCG | 8314 |
| rs776196400 | snp | A/C | 1.6473e-05 | 0.00286988 | upstream-variant-2KB, synonymous-codon | PHF7, BAP1 | GRCh38.p7 | 3:52409595 | GATCTCCTCCACTTG[A/C]ACCCCCTTGACACCT | 8314 |
| rs776240891 | snp | G/T | 1.65141e-05 | 0.00287346 | missense | BAP1 | GRCh38.p7 | 3:52406279 | CCTCTAGTACTGTCT[G/T]ACGGTTCACCTTCAG | 8314 |
| rs776357624 | snp | A/G | | | utr-variant-3-prime | BAP1 | GRCh38.p7 | 3:52401283 | CACAGGGGCTCCAAC[A/G]GGTTGTCTTGATCCT | 8314 |
| rs776521900 | snp | C/T | 0.000126119 | 0.00794001 | intron-variant | BAP1 | GRCh38.p7 | 3:52402439 | GCGAAGAGGTAGAGA[C/T]CCTTGAGCAGGTGCT | 8314 |
| rs776549962 | snp | C/T | 1.65113e-05 | 0.00287322 | missense | BAP1 | GRCh38.p7 | 3:52403476 | GCAGGCCTGTGCTGA[C/T]GACAGGACCCAGATC | 8314 |
| rs776553452 | snp | A/G | 3.29549e-05 | 0.00405911 | intron-variant | BAP1 | GRCh38.p7 | 3:52403128 | GGAGAAAACCACAAC[A/G]GAGGCTCACCTTGGG | 8314 |
| rs776606194 | in-del | -/GTCATCCTCATA | 6.62701e-05 | 0.00575593 | cds-indel | BAP1 | GRCh38.p7 | 3:52404491 | CACGTCATCCTCCTC[-/GTCATCCTCATA]GTCATCCTCATCATC | 8314 |
| rs776625425 | in-del | -/GACTGAGATATT | | | intron-variant | BAP1 | GRCh38.p7 | 3:52404386 | GCATTCTCAGACACA[-/GACTGAGATATT]GACTGAGATATTCAG | 8314 |
| rs776631746 | snp | A/T | 4.52724e-05 | 0.00475754 | intron-variant | BAP1 | GRCh38.p7 | 3:52404617 | GGGCAGTTACAAACA[A/T]GTGCTGCTCGGCCCA | 8314 |
| rs776634869 | snp | C/T | 1.65586e-05 | 0.00287733 | missense | BAP1 | GRCh38.p7 | 3:52403634 | GAGCGCAGTGGCGAG[C/T]TGAAAGCACTGCCGA | 8314 |
| rs776641550 | snp | A/G | 1.64779e-05 | 0.00287031 | intron-variant | BAP1 | GRCh38.p7 | 3:52407465 | TATCCTTTGCTCTAC[A/G]GGGAAGAAAATAAGG | 8314 |
| rs776670315 | snp | C/G/T | 3.29501e-05 | 0.00405884 | intron-variant | BAP1 | GRCh38.p7 | 3:52407364 | GATACTCCCCCTACT[C/G/T]CCACCCCACATCAGC | 8314 |
| rs776746400 | snp | C/T | 3.7489e-05 | 0.00432933 | missense | BAP1 | GRCh38.p7 | 3:52402319 | TTGTAGGGGCGAGAG[C/T]GTTTCCGCCGGTCAG | 8314 |
| rs776764724 | snp | C/T | 1.73501e-05 | 0.00294529 | upstream-variant-2KB, synonymous-codon | PHF7, BAP1 | GRCh38.p7 | 3:52409852 | CTCACCTGGGTCGCT[C/T]TCCAGCTCCAGCCAG | 8314 |
| rs776898908 | snp | C/T | 1.65083e-05 | 0.00287296 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52405278 | TGCGCATGAACCAGC[C/T]GCCTCCTCTGCACCA | 8314 |
| rs776948108 | snp | G/T | | | intron-variant | BAP1 | GRCh38.p7 | 3:52407538 | AGGCAAAGCTTCAGA[G/T]AGCAGCCTGGAGGCA | 8314 |
| rs777120269 | snp | A/C | 1.64757e-05 | 0.00287012 | intron-variant | BAP1 | GRCh38.p7 | 3:52408439 | AAAACATGGCAGCAT[A/C]CCACCCTCCAAACAA | 8314 |
| rs777205564 | snp | C/T | 3.30306e-05 | 0.00406377 | intron-variant | BAP1 | GRCh38.p7 | 3:52405074 | GCCTCTCAAGAGAAT[C/T]AAGTAGAGAATCCTG | 8314 |
| rs777417522 | snp | A/G | 0.000115955 | 0.0076134 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52403648 | GTTGAAAGCACTGCC[A/G]ATCTCAGAGGCCGTG | 8314 |
| rs777484307 | snp | C/T | 3.30622e-05 | 0.00406571 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52403711 | CTGCGAGTGTGTGGG[C/T]ACTGCCACAGCCGGA | 8314 |
| rs777485692 | snp | C/G | 2.08805e-05 | 0.00323107 | intron-variant | BAP1 | GRCh38.p7 | 3:52404600 | TCCTGGGACAAAGAC[C/G]AGGGCAGTTACAAAC | 8314 |
| rs777514791 | snp | G/T | 1.64762e-05 | 0.00287016 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52407452 | ATTGCCAATCGCATA[G/T]CCTTTGCTCTACGGG | 8314 |
| rs777571654 | snp | C/T | 1.66815e-05 | 0.00288799 | intron-variant | BAP1 | GRCh38.p7 | 3:52407914 | CCCTCAGGGTCAGAT[C/T]TGCCCAGTTGGCTGT | 8314 |
| rs777664260 | snp | A/G | 3.3036e-05 | 0.0040641 | missense | BAP1 | GRCh38.p7 | 3:52405818 | GCTTCCAGCACCAGC[A/G]GGGACTTGTTGCTGG | 8314 |
| rs777741631 | snp | C/G | | | intron-variant | BAP1 | GRCh38.p7 | 3:52407095 | TGCCACTGGGTACCA[C/G]ATACCAGAGGGCCCT | 8314 |
| rs777810659 | in-del | -/CTGGGTGCACCAAGTGGCCAGTGAG | 1.65198e-05 | 0.00287395 | intron-variant | BAP1 | GRCh38.p7 | 3:52403375 | CTTCCCTCCTCCCTC[-/CTGGGTGCACCAAGTGGCCAGTGAG]CCAGTCCAAGGCCCA | 8314 |
| rs777869443 | snp | C/G | 4.09475e-05 | 0.00452461 | upstream-variant-2KB, missense | PHF7, BAP1 | GRCh38.p7 | 3:52408533 | CGGACGTATCATCCA[C/G]CAAGGTAGAGACCTT | 8314 |
| rs777883767 | snp | A/G | 1.74333e-05 | 0.00295235 | intron-variant | BAP1 | GRCh38.p7 | 3:52402946 | CAATAGGCAGCTAGA[A/G]GCAAGGATGAGCAGC | 8314 |
| rs777965386 | snp | A/G | | | downstream-variant-500B | BAP1, DNAH1 | GRCh38.p7 | 3:52400774 | AAAGCCACAGATTTG[A/G]TGAAAGCCATGGCCC | 8314 |
| rs778194859 | in-del | -/T | 0.000165604 | 0.00909805 | intron-variant | BAP1 | GRCh38.p7 | 3:52408467 | AAAGCACAGAGTCCA[-/T]GCAGACCTGGTGGGC | 8314 |
| rs778202992 | snp | C/G | 0.000103691 | 0.00719965 | upstream-variant-2KB, intron-variant | PHF7, BAP1 | GRCh38.p7 | 3:52409798 | GGCGCGTCCCGGGCC[C/G]ATCCGGCCTCCCCAG | 8314 |
| rs778256913 | snp | C/T | 1.64776e-05 | 0.00287028 | intron-variant | BAP1 | GRCh38.p7 | 3:52404404 | CTGAGATATTCAGGA[C/T]GGGATCCGAAGCACC | 8314 |
| rs778350656 | snp | A/C/T | 0.000115322 | 0.00759273 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52407446 | CGGGGCATTGCCAAT[A/C/T]GCATATCCTTTGCTC | 8314 |
| rs778397771 | snp | A/G | 3.1096e-05 | 0.00394297 | utr-variant-3-prime | BAP1 | GRCh38.p7 | 3:52402269 | CAAGAGTGGGCTGCA[A/G]AGTCAGGGCCAGCAG | 8314 |
| rs778423438 | snp | A/G | 1.65067e-05 | 0.00287282 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52403489 | GATGACAGGACCCAG[A/G]TCACGGACAGCACGG | 8314 |
| rs778596308 | snp | C/T | 1.65395e-05 | 0.00287567 | missense | BAP1 | GRCh38.p7 | 3:52403610 | GTCGGGTTGGCTGAG[C/T]GGATAGGCGAGCGCA | 8314 |
| rs778628881 | snp | A/G | 1.65056e-05 | 0.00287272 | missense | BAP1 | GRCh38.p7 | 3:52403512 | CAGCACGGTTGTAGC[A/G]TATGCAGTCAACACG | 8314 |
| rs778647638 | snp | C/G | 1.67161e-05 | 0.00289098 | missense | BAP1 | GRCh38.p7 | 3:52402390 | GCGCCGCCGCACGGA[C/G]ATGTTCTGCTCCACT | 8314 |
| rs778664226 | snp | C/T | 1.79027e-05 | 0.00299183 | upstream-variant-2KB, utr-variant-5-prime | PHF7, BAP1 | GRCh38.p7 | 3:52409904 | GGCGGCCCCTCAGCG[C/T]CATGTCCAGGCCCTC | 8314 |
| rs778794633 | snp | C/T | | | utr-variant-5-prime, upstream-variant-2KB | PHF7, BAP1 | GRCh38.p7 | 3:52410951 | CGGTTGTGACCACAC[C/T]GACACGTATTTTACA | 8314 |
| rs778824091 | snp | C/G | 1.73957e-05 | 0.00294916 | intron-variant | BAP1 | GRCh38.p7 | 3:52405720 | CCATGTCAGACATTA[C/G]CGGGTGGCTCTGAGG | 8314 |
| rs778858627 | in-del | -/AGAAAATAAGGCCGTATC | 1.64781e-05 | 0.00287033 | intron-variant | BAP1 | GRCh38.p7 | 3:52407470 | TTTGCTCTACGGGGA[-/AGAAAATAAGGCCGTATC]AGAATAATTTCTCCT | 8314 |
| rs778976365 | snp | A/G | 5.3614e-05 | 0.00517727 | intron-variant | BAP1 | GRCh38.p7 | 3:52406819 | AACAGGGCAGGCACA[A/G]GGCCCTTACCCTGCA | 8314 |
| rs779034917 | snp | A/T | 3.70322e-05 | 0.00430288 | intron-variant | BAP1 | GRCh38.p7 | 3:52408104 | AGAATAGTCACCCAT[A/T]CACAGCACCCCTCAC | 8314 |
| rs779041372 | snp | C/T | | | utr-variant-3-prime | BAP1 | GRCh38.p7 | 3:52402032 | CTGCTGCTCCACAGC[C/T]GGCTGTGGAGGAAGC | 8314 |
| rs779070533 | snp | A/G | | | downstream-variant-500B | BAP1, DNAH1 | GRCh38.p7 | 3:52400907 | AGCTGGACACTCAAG[A/G]ATCATATACTTCTTA | 8314 |
| rs779209658 | snp | C/T | 1.70877e-05 | 0.00292294 | upstream-variant-2KB, intron-variant | PHF7, BAP1 | GRCh38.p7 | 3:52409773 | AAGAGGAGGGGGTGA[C/T]GGTCAGGCAGGCGCG | 8314 |
| rs779252716 | snp | C/T | 1.64928e-05 | 0.00287161 | missense | BAP1 | GRCh38.p7 | 3:52403287 | TGGAGGGCGAGGAAC[C/T]CTTCCCACCCTCTGG | 8314 |
| rs779304334 | snp | A/G | 1.65515e-05 | 0.00287671 | intron-variant | BAP1 | GRCh38.p7 | 3:52403925 | AGATGTGAAGCAAGG[A/G]AACGGGCCAGGTGAC | 8314 |
| rs779340967 | snp | C/G | | | upstream-variant-2KB, synonymous-codon | PHF7, BAP1 | GRCh38.p7 | 3:52408582 | TTCGATCCATTTGAA[C/G]AGGAAGATAAATCCA | 8314 |
| rs779485443 | snp | A/G | 1.65712e-05 | 0.00287843 | upstream-variant-2KB, intron-variant | PHF7, BAP1 | GRCh38.p7 | 3:52409704 | TCCGGCAGGGAGAAA[A/G]GGCTCTTACCGAAAT | 8314 |
| rs779498509 | snp | C/T | 1.77969e-05 | 0.00298298 | upstream-variant-2KB, utr-variant-5-prime | PHF7, BAP1 | GRCh38.p7 | 3:52409899 | CGCGGGGCGGCCCCT[C/T]AGCGCCATGTCCAGG | 8314 |
| rs779566198 | snp | C/T | 1.6649e-05 | 0.00288518 | missense | BAP1 | GRCh38.p7 | 3:52405780 | CTGTGTGGTTGCCCT[C/T]AGAGGCTGCAGGGGC | 8314 |
| rs779640381 | snp | A/G | 3.07688e-05 | 0.00392217 | utr-variant-3-prime | BAP1 | GRCh38.p7 | 3:52402256 | GAGGGCCACACGGCA[A/G]GAGTGGGCTGCAGAG | 8314 |
| rs779729129 | snp | A/T | 1.65844e-05 | 0.00287957 | intron-variant | BAP1 | GRCh38.p7 | 3:52405334 | AGGACCTCCAGTAGG[A/T]TCTCCAAGAAAAGCT | 8314 |
| rs779774919 | snp | G/T | 1.64836e-05 | 0.0028708 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52405209 | ATTGAGGCTGCTGCC[G/T]GGAGGCTTCACCACT | 8314 |
| rs779862891 | snp | A/G | 3.06537e-05 | 0.00391483 | intron-variant | BAP1 | GRCh38.p7 | 3:52408088 | ATCAGCTGTGAAACC[A/G]AGAATAGTCACCCAT | 8314 |
| rs779877855 | snp | C/T | 1.65067e-05 | 0.00287282 | missense | BAP1 | GRCh38.p7 | 3:52403502 | AGATCACGGACAGCA[C/T]GGTTGTAGCGTATGC | 8314 |
| rs779960548 | snp | A/G | 2.02608e-05 | 0.00318276 | upstream-variant-2KB, synonymous-codon | PHF7, BAP1 | GRCh38.p7 | 3:52408510 | ATTCACAATATCATC[A/G]TCAATCACGGACGTA | 8314 |
| rs780012037 | snp | C/T | | | intron-variant | BAP1 | GRCh38.p7 | 3:52403038 | TCCAGCCACCAATCT[C/T]CACACCAAAGTTCCA | 8314 |
| rs780037860 | snp | A/C | 1.6473e-05 | 0.00286988 | intron-variant | BAP1 | GRCh38.p7 | 3:52402729 | TTGCCAGAGCAGCCA[A/C]CAGTGGACCTCGGGA | 8314 |
| rs780338105 | snp | C/G | 1.64863e-05 | 0.00287104 | missense | BAP1 | GRCh38.p7 | 3:52403265 | TGGCTGCCTTGGATT[C/G]GTCTGATGGAGGGCG | 8314 |
| rs780400454 | snp | A/C | 1.90362e-05 | 0.00308508 | missense | BAP1 | GRCh38.p7 | 3:52404577 | CACCTGCCGCCAGGT[A/C]TTCTTCCTCCTGGGA | 8314 |
| rs780414230 | in-del | -/T | 1.64906e-05 | 0.00287142 | frameshift-variant | BAP1 | GRCh38.p7 | 3:52403867 | ACCGCTCAATGCCCC[-/T]GGCTTCCCTGTTCCC | 8314 |
| rs780457225 | snp | G/T | 1.66504e-05 | 0.0028853 | missense, intron-variant | BAP1 | GRCh38.p7 | 3:52406372 | GGATGTCGTGGTAGG[G/T]CTCCCTGCAGTCACA | 8314 |
| rs780478157 | snp | A/G | | | downstream-variant-500B | BAP1, DNAH1 | GRCh38.p7 | 3:52400976 | TAAGGCCCAGCCTCC[A/G]TATCTCAGGCCAGCA | 8314 |
| rs780526044 | snp | C/T | | | intron-variant | BAP1 | GRCh38.p7 | 3:52403965 | CAGTACCCAGAATGG[C/T]TTAAATACATCCCGA | 8314 |
| rs780639705 | snp | C/T | 1.65176e-05 | 0.00287376 | intron-variant | BAP1 | GRCh38.p7 | 3:52405063 | TGCCTGTTGCAGCCT[C/T]TCAAGAGAATCAAGT | 8314 |
| rs780794104 | snp | C/T | 1.65258e-05 | 0.00287448 | intron-variant | BAP1 | GRCh38.p7 | 3:52403393 | GGTGCACCAAGTGGC[C/T]AGTGAGCCAGTCCAA | 8314 |
| rs780915258 | snp | A/G | 1.66799e-05 | 0.00288785 | intron-variant | BAP1 | GRCh38.p7 | 3:52407932 | CCCAGTTGGCTGTGA[A/G]CCAGGATGAAGGCAC | 8314 |
| rs780972065 | snp | A/C | 1.65102e-05 | 0.00287312 | intron-variant | BAP1 | GRCh38.p7 | 3:52405083 | GAGAATCAAGTAGAG[A/C]ATCCTGCAAGGGTGC | 8314 |
| rs781013694 | snp | A/G | 1.64841e-05 | 0.00287085 | missense | BAP1 | GRCh38.p7 | 3:52403811 | TCAGCCAAGACGTTG[A/G]TGGTGTTGGGCTGCA | 8314 |
| rs781024993 | snp | A/G | 3.29669e-05 | 0.00405984 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52405194 | GTTGGGGTGAACCCC[A/G]TTGAGGCTGCTGCCT | 8314 |
| rs781238431 | snp | C/T | | | upstream-variant-2KB, intron-variant | PHF7, BAP1 | GRCh38.p7 | 3:52408695 | TAATCCTTTGCACTG[C/T]GTCATCACTCAGGTG | 8314 |
| rs781241379 | snp | A/G | | | intron-variant | BAP1 | GRCh38.p7 | 3:52405994 | GGCTGAGGACCTAAA[A/G]GAATAATGGCCTTGG | 8314 |
| rs781269263 | snp | C/T | 3.29538e-05 | 0.00405904 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52403186 | GCCAGGCCTCACCAT[C/T]CCCGTCTTCTCTCTG | 8314 |
| rs781391677 | snp | C/G | 1.66095e-05 | 0.00288175 | intron-variant | BAP1 | GRCh38.p7 | 3:52405958 | AAGGGTAGACCCGGG[C/G]TTCTACCTTAAATAG | 8314 |
| rs781479762 | snp | A/C | 0.00388348 | 0.0438937 | synonymous-codon | BAP1 | GRCh38.p7 | 3:52404563 | TCGGCTGCGGCCCAC[A/C]CCTGCCGCCAGGTCT | 8314 |
| rs781517578 | snp | C/T | 1.64735e-05 | 0.00286993 | upstream-variant-2KB, intron-variant | PHF7, BAP1 | GRCh38.p7 | 3:52409517 | CCTTCCCCAGCACTC[C/T]GGGTGTAAGGGGCAG | 8314 |
| rs781526502 | in-del | -/ACAAAGC | 2.09255e-05 | 0.00323455 | intron-variant | BAP1 | GRCh38.p7 | 3:52408451 | CATCCCACCCTCCAA[-/ACAAAGC]ACAGAGTCCAGCAGA | 8314 |
| rs781565390 | snp | A/G | 0.000201279 | 0.0100299 | intron-variant | BAP1 | GRCh38.p7 | 3:52402962 | GCAAGGATGAGCAGC[A/G]AGTCCATGCCTATCA | 8314 |
| rs796105345 | snp | A/G | | | intron-variant | BAP1 | GRCh38.p7 | 3:52405492 | AAAAAGAAGCAGGAA[A/G]AAAAAAAAAAAAAAA | 8314 |
| rs796584274 | snp | C/T | | | upstream-variant-2KB, intron-variant | PHF7, BAP1 | GRCh38.p7 | 3:52408860 | CACCCAGTCTCCTTA[C/T]GAAGTCTATAGTTCT | 8314 |
| rs864622592 | snp | C/T | | | stop-gained | BAP1 | GRCh38.p7 | 3:52406258 | GTACTAGAGGCTCTG[C/T]AGCAGGTAGGTGCCC | 8314 |