SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs13472759 | snp | A/G | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277801 | GCCTACCACATCCTG[A/G]GTAGGTCCTGGGCCA | 66734 |
rs13472760 | snp | C/T | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277757 | AGATGTGACACCCAC[C/T]CCCCCCCCCAGGTAG | 66734 |
rs29520387 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274667 | TGTGTGGAAGTTGTT[C/T]TTCTACCACCATAGA | 66734 |
rs29965538 | snp | A/G | 0.375 | 0.216506 | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274398 | CTCTCTCTTTTTTAA[A/G]GGATTTACTTATTTA | 66734 |
rs33120826 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274725 | TAAAAAAAATTCTTC[C/T]CGGATTCAGTAGAGA | 66734 |
rs33243993 | snp | A/C | 0.375 | 0.216506 | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274483 | GCATCCGATCTTATT[A/C]CTGATGGTTGCGAGT | 66734 |
rs47311213 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275219 | TCAAGAGACCATCCC[A/G]TCTCTGCCCACAGAG | 66734 |
rs49941193 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275060 | AAAATTGAACCCACA[G/T]CCTCATGCTTGCGGG | 66734 |
rs212416550 | snp | C/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274847 | CTAACAGATTTTCTT[C/G]TAGGGGAAGGTGTCT | 66734 |
rs214047413 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275884 | CCTGCTTTATCTAAA[C/T]CACCTATTAACCAAC | 66734 |
rs214172017 | in-del | -/CTGGCCCAGCTT | | | cds-indel, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278479 | CTCTGGATGAGGGAC[-/CTGGCCCAGCTT]CTGGCCCTTCCCCCT | 66734 |
rs214264456 | snp | C/T | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277924 | CCCTTGCCTGTCTGC[C/T]CATCTTGCCCCTCAT | 66734 |
rs214626760 | in-del | -/A | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274710 | AATATTTAAAATATT[-/A]AAAAAAAATTCTTCT | 66734 |
rs215904016 | in-del | -/A | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274686 | TACCACCATAGACAG[-/A]AAATATTTTAATATT | 66734 |
rs215973032 | snp | A/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275841 | GGTTAACCACTTCTG[A/T]TATAGCCCCCCCATT | 66734 |
rs216261297 | snp | A/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277322 | TTCTAGGAGGCTGGA[A/G]AAGACCAAGGTCGGG | 66734 |
rs218324414 | snp | C/T | | | synonymous-codon, nc-transcript-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277565 | ACCCATCGCTGACAT[C/T]TATGAACAGGAGAAG | 66734 |
rs218921213 | snp | A/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276205 | ACTACTCCGCAGCGT[A/C]GAGAGACTGGATGGA | 66734 |
rs219428445 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274691 | CCATAGACAGAAAAT[A/G]TTTTAATATTTAAAA | 66734 |
rs219990190 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275218 | CTCAAGAGACCATCC[C/T]GTCTCTGCCCACAGA | 66734 |
rs220097870 | in-del | -/A | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277857 | GCTGGCTGGGTTGGG[-/A]AGTGGGTGGGGAGCA | 66734 |
rs220130199 | in-del | -/A | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274805 | AGAACATTGCAGAAA[-/A]CCTCAAAACAAAGGC | 66734 |
rs220225465 | in-del | -/C | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277776 | CCCCCCAGGTAGGGG[-/C]CACCAGCCAGCCTAC | 66734 |
rs220440499 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276268 | GCCAAAGAGAGGAGC[G/T]TGCCATCGTGACGTC | 66734 |
rs221278044 | in-del | -/C | | | downstream-variant-500B, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278101 | CTGCTTGTTTGGGAG[-/C]AGGGAGGGCTGCTAG | 66734 |
rs224160476 | snp | C/T | | | utr-variant-3-prime, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278386 | GGGCCTTGTTGCCAG[C/T]TATGAGTCCCCTTTG | 66734 |
rs225771256 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274369 | TTTAAAACCATATTT[C/T]ACATTTCTATTCTCT | 66734 |
rs225829391 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274474 | CATAAGAGGGCATCC[G/T]ATCTTATTCCTGATG | 66734 |
rs225905527 | snp | A/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276098 | CGGGCATACACTTAC[A/T]GACACATTAAAAATT | 66734 |
rs226013072 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275073 | CATCCTCATGCTTGC[A/G]GGCAAGCACCCTACC | 66734 |
rs226586723 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274498 | CCTGATGGTTGCGAG[C/T]CACCATGTGGTTGCT | 66734 |
rs226671343 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275366 | TTTAGAATTACTCAA[G/T]CGTGCATCTGTTAAC | 66734 |
rs226980466 | snp | C/T | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277085 | TACGAGTCCCCCGCC[C/T]ACTCCACTCCAGGTG | 66734 |
rs228393284 | snp | A/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155276954 | CACAGAGCTCTGTCC[A/G]CAGCCGACCGCTGTA | 66734 |
rs228468276 | in-del | -/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275248 | GCTGGGGTTAAGGAG[-/T]GCACCGCCACCCAGC | 66734 |
rs229417011 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275961 | GAAAGCCTGGGTGGG[A/G]GGTCTGGAGCAATGG | 66734 |
rs231422654 | snp | C/T | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278009 | CCCCTTGTCCTGACT[C/T]GGTGTATGGATCTGT | 66734 |
rs232216831 | in-del | -/CA | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275318 | AGCTTGTTTTTGTAC[-/CA]CAATCACTACCATTT | 66734 |
rs232242213 | snp | A/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277359 | ACGAGCTTCAGTAGA[A/G]GTGAGAGCCTCTGGC | 66734 |
rs232963491 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274986 | AGAAGGTAGAGATGG[G/T]ATATAAGGCCTGGTT | 66734 |
rs233269693 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275825 | ATGTTCTCCATCTCA[C/T]GGTTAACCACTTCTG | 66734 |
rs234137942 | snp | A/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275065 | TGAACCCACATCCTC[A/C]TGCTTGCGGGCAAGC | 66734 |
rs234327424 | snp | C/T | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277064 | TGCCAGGTCCCGCCC[C/T]TGGCTTACGAGTCCC | 66734 |
rs234417376 | snp | A/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275637 | TCTCCGTGTCCGTCC[A/C]GTCCCTCTATCCCCT | 66734 |
rs235220936 | in-del | -/CTTCTTTCTAT | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275746 | CATTCCCAGACCATA[-/CTTCTTTCTAT]CCTACCAAGGGGCTC | 66734 |
rs235583560 | snp | C/G | | | utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277666 | GAGGGGGGTGGCTGG[C/G]AGTTCTGGTCAGGTT | 66734 |
rs235622468 | in-del | -/G | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277772 | TCCCCCCCCCAGGTA[-/G]GGGCCACCAGCCAGC | 66734 |
rs237122406 | snp | A/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276112 | CAGACACATTAAAAA[A/T]TTTAAAACTCTGGGT | 66734 |
rs237363200 | in-del | -/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277298 | CTGATTTGGGACACC[-/G]GGCCCCTGTTCTAGG | 66734 |
rs237546819 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276194 | AGGTGCGGTGAACTA[C/T]TCCGCAGCGTCGAGA | 66734 |
rs240477415 | in-del | -/A | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274802 | GCCAGAACATTGCAG[-/A]AAACCTCAAAACAAA | 66734 |
rs242013291 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275140 | CAGCTCCCTAAGACA[G/T]TTAAAAAGCAAAACA | 66734 |
rs243324361 | in-del | -/TTTTT | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274618 | CTTTCCTGCTGTGTC[-/TTTTT]TTTTTTTTTTTTTAC | 66734 |
rs244978353 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274447 | GTACCCTGTAGCTGT[C/T]TTCAGACACACCATA | 66734 |
rs245100809 | snp | A/C/T | | | upstream-variant-2KB | Map1lc3a | GRCm38.p3 | 2:155275835 | TCTCATGGTTAACCA[A/C/T]TTCTGATATAGCCCC | 66734 |
rs245327280 | snp | A/T | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277256 | AGGGTCAGGTTCCAC[A/T]AGAAGGGATGGAGTG | 66734 |
rs245764594 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275821 | CCGAATGTTCTCCAT[C/T]TCATGGTTAACCACT | 66734 |
rs246770514 | in-del | -/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275846 | CCACTTCTGATATAG[-/C]CCCCCCCATTCAGCG | 66734 |
rs248020362 | snp | A/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155276832 | CCGGTGGAGGGCTGC[A/G]GGGCCGACGGCCCCG | 66734 |
rs248101098 | snp | A/G | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277802 | CCTACCACATCCTGG[A/G]TAGGTCCTGGGCCAG | 66734 |
rs248189958 | in-del | -/G | | | utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277653 | GTCAAGAGGAGGGGA[-/G]GGGGGTGGCTGGGAG | 66734 |
rs249065556 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276182 | TAAACTCGATGAAGG[C/T]GCGGTGAACTACTCC | 66734 |
rs250134296 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275768 | CTATCCTACCAAGGG[A/G]CTCTACCTGTAAAAT | 66734 |
rs251093251 | in-del | -/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275869 | ATTCAGCGATTCTCT[-/C]CTGCTTTATCTAAAC | 66734 |
rs251248999 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275055 | TTCCGAAAATTGAAC[C/T]CACATCCTCATGCTT | 66734 |
rs251920446 | snp | C/T | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277397 | GACCGAAAGTGAAGG[C/T]TCAGTAACATTTTGG | 66734 |
rs251942493 | snp | A/G | | | downstream-variant-500B, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278147 | CACAGAGACAGACGC[A/G]TGTTCCCAGAAACCC | 66734 |
rs253352873 | in-del | -/CCCC | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277757 | GATGTGACACCCACT[-/CCCC]CCCCCCCCCAGGTAG | 66734 |
rs254644162 | snp | A/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274732 | AATTCTTCTCGGATT[A/C]AGTAGAGAGATGTCC | 66734 |
rs254959572 | in-del | -/G | | | downstream-variant-500B, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278102 | GCTTGTTTGGGAGCA[-/G]GGGAGGGCTGCTAGG | 66734 |
rs255335178 | snp | C/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155276174 | TCGAATGCTAAACTC[C/G]ATGAAGGTGCGGTGA | 66734 |
rs256272806 | snp | C/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155277073 | CCGCCCTTGGCTTAC[C/G]AGTCCCCCGCCCACT | 66734 |
rs257748109 | snp | A/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275365 | GTTTAGAATTACTCA[A/C]GCGTGCATCTGTTAA | 66734 |
rs257862203 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274485 | ATCCGATCTTATTCC[G/T]GATGGTTGCGAGTCA | 66734 |
rs257974682 | in-del | -/CC | | | downstream-variant-500B, utr-variant-3-prime, nc-transcript-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155277758 | GATGTGACACCCACT[-/CC]CCCCCCCAGGTAGGG | 66734 |
rs258138006 | in-del | -/AAA | | | downstream-variant-500B, intron-variant, utr-variant-3-prime, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278244 | ATCAGAACAACAATG[-/AAA]AAAAAAAAAAGATCC | 66734 |
rs259880401 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275397 | TTGGTTCCCATCAAA[C/T]TTCTTCCCTTTGAGC | 66734 |
rs260815144 | snp | G/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275071 | CACATCCTCATGCTT[G/T]CGGGCAAGCACCCTA | 66734 |
rs261271421 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274468 | ACACACCATAAGAGG[A/G]CATCCGATCTTATTC | 66734 |
rs263608187 | in-del | -/CTC | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274387 | ATTTCTATTCTCTCT[-/CTC]TTTTTTAAAGGATTT | 66734 |
rs263987164 | in-del | -/A | | | downstream-variant-500B, intron-variant, utr-variant-3-prime, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278245 | ATCAGAACAACAATG[-/A]AAAAAAAAAGATCCA | 66734 |
rs264323933 | in-del | -/C | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274389 | TTCTATTCTCTCTCT[-/C]TTTTTTAAAGGATTT | 66734 |
rs264574383 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275433 | GTTTCTGAAGTACAA[A/G]CTAACTTTTTTTTTC | 66734 |
rs264648644 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155275196 | TCTAGACCAGGCTGG[C/T]CTTGAACTCAAGAGA | 66734 |
rs265869360 | snp | A/G | | | intron-variant, upstream-variant-2KB | Map1lc3a, LOC105244337 | Mm_Celera | 2:155276913 | CGAGGCGGAGTCGCG[A/G]GAGGCCTCAGCACCG | 66734 |
rs387206120 | in-del | -/CAGCCCTTGAGCTCGAGCCCCG | | | utr-variant-5-prime, nc-transcript-variant | Map1lc3a | Mm_Celera | 2:155276501 | TCAGCGCGAGCCCCG[-/CAGCCCTTGAGCTCGAGCCCCG]GAGCCCCCGGCGCGC | 66734 |
rs387518953 | in-del | -/A | | | upstream-variant-2KB | Map1lc3a | Mm_Celera | 2:155274689 | CACCATAGACAGAAA[-/A]TATTTTAATATTTAA | 66734 |
rs387669166 | in-del | -/A | | | utr-variant-3-prime, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | Mm_Celera | 2:155278254 | ACAATGAAAAAAAAA[-/A]GATCCACACATTTAT | 66734 |
rs579010526 | snp | C/T | | | upstream-variant-2KB | Map1lc3a | GRCm38.p3 | 2:155274800 | GAAGCCAGAACATTG[C/T]AGAAACCTCAAAACA | 66734 |
rs579666311 | snp | A/G | | | downstream-variant-500B, intron-variant, upstream-variant-2KB | Pigu, Map1lc3a, LOC105244337 | GRCm38.p3 | 2:155278233 | GGAATACATGTCATC[A/G]GAACAACAATGAAAA | 66734 |
rs585321283 | snp | A/G | | | upstream-variant-2KB | Map1lc3a | GRCm38.p3 | 2:155274495 | ATTCCTGATGGTTGC[A/G]AGTCACCATGTGGTT | 66734 |
rs586061754 | snp | A/C | | | upstream-variant-2KB | Map1lc3a | GRCm38.p3 | 2:155275853 | CTGATATAGCCCCCC[A/C]ATTCAGCGATTCTCT | 66734 |