iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Usp42

SNP - dbSNP
dbSNP	Type	Alleles	Het	Se(het)	Fxn-class	Gene Name	Assembly	Chr-pos	Sequence	Entrez Gene
rs8145180	snp	G/T			utr-variant-3-prime, downstream-variant-500B	Usp42, Cyth3	Rn_Celera	12:12877563	GTCTTAGGCGGTTTT[G/T]TTTTTAGCGGTATGT	288482
rs8148085	snp	G/T			utr-variant-3-prime, downstream-variant-500B	Usp42, Cyth3	Rn_Celera	12:12877562	AGTCTTAGGCGGTTT[G/T]GTTTTTAGCGGTATG	288482
rs8159703	snp	A/C			utr-variant-3-prime, intron-variant, nc-transcript-variant	Usp42, Cyth3	Rn_Celera	12:12877181	GGATCAAGCTGACGA[A/C]TCAGACTCCAACATC	288482
rs13456180	snp	C/T	0.0768	0.180282	missense, nc-transcript-variant	Usp42	Rn_Celera	12:12873234	TCTGGATGGTCGTCA[C/T]TATTGTCTAGAGTCT	288482
rs104952510	snp	C/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12851197	TGGCCTCTGCAGGTA[C/T]CAGGAACACGTGCAG	288482
rs105123541	snp	A/G	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12849940	GGCCCTTTACACTGT[A/G]CAAGGGAAGGAATCC	288482
rs105912372	snp	A/C	0	0	upstream-variant-2KB, intron-variant	Usp42	Rn_Celera	12:12857737	CACACACACACACAC[A/C]CCAATTTCTTTTGCC	288482
rs106260063	snp	C/T	0	0	intron-variant	Usp42	Rn_Celera	12:12866769	CCCAGGGCCTTGCTC[C/T]TCCTAGGCAAGCACT	288482
rs106363865	snp	C/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12849985	GCTATGCTAGCATTC[C/T]ACTCAGCGAATTTGA	288482
rs106441732	snp	C/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12850046	GTTTATTACCCTGTG[C/T]GCTTTATATAGTTTG	288482
rs106450180	snp	A/G	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12850448	GGAGGGCACTGGAGG[A/G]AGACTTGTTAGGATA	288482
rs106970676	snp	A/G	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12851492	TAGCACTGCAGGTCC[A/G]AGCTACTGTTTGCCC	288482
rs107192994	snp	C/T	0	0	utr-variant-5-prime, nc-transcript-variant, intron-variant	Usp42, LOC103691027	Rn_Celera	12:12851908	ACCCTCCTATATTAC[C/T]ACCTCCAGTTCTTGA	288482
rs107229429	snp	C/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12851198	GGCCTCTGCAGGTAC[C/T]AGGAACACGTGCAGT	288482
rs107243131	snp	A/G	0	0	upstream-variant-2KB, intron-variant	Usp42	Rn_Celera	12:12858808	TTAATAGGATACCCA[A/G]CACATTGAAAAACTC	288482
rs107326561	snp	G/T	0	0	intron-variant, nc-transcript-variant	Usp42, LOC103691027	Rn_Celera	12:12854363	TAATAAATCCTAACG[G/T]GGCAGGGGAGAACTT	288482
rs197018817	snp	A/G	0	0	intron-variant	Usp42	Rn_Celera	12:12865831	GTTATGTGTGCAGAT[A/G]TGTGTTCAGGGTAAA	288482
rs197214132	snp	C/T	0	0	intron-variant	Usp42	Rn_Celera	12:12860377	ACCTGTGCGTGCGTG[C/T]GTGTGTGTGTGTGTG	288482
rs197393924	snp	A/G	0	0	intron-variant	Usp42	Rn_Celera	12:12869709	TAGCCAGGGCCAGGT[A/G]ACGTGTCTTAGGGGA	288482
rs197474170	snp	C/G	0	0	intron-variant	Usp42	Rn_Celera	12:12868983	GCCAGCCTTCTGTCA[C/G]CCACAGCTGCAGATT	288482
rs197516399	snp	A/G	0	0	intron-variant	Usp42	Rn_Celera	12:12873815	ATCGTCTTAATGGGT[A/G]TTTGAGTGGGAACAT	288482
rs197593718	snp	C/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12850880	AACAAGCATGAGGAC[C/T]GGAGTTTTCTATCTC	288482
rs197739082	snp	A/G	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12851669	TTGTCTTCTTCCACT[A/G]TTGTAGGGATAGAAT	288482
rs197942850	snp	A/G	0	0	intron-variant	Usp42	Rn_Celera	12:12863140	AGAGAAGGAACGGAC[A/G]GATTCCCACAAGTGG	288482
rs198156007	snp	C/T	0	0	intron-variant, nc-transcript-variant	Usp42	Rn_Celera	12:12875209	AGGTGAAGCACTGTG[C/T]GGGGCTGGAGGGTCC	288482
rs198411276	snp	C/T	0	0	upstream-variant-2KB, intron-variant	Usp42	Rn_Celera	12:12859602	TTGAGGGTATAGTGA[C/T]TGGCAGGTAGACTGC	288482
rs198429758	snp	A/G	0	0	intron-variant	Usp42	Rn_Celera	12:12864095	GCACAGAGCACAGGC[A/G]TGTGTTGCCACGCCC	288482
rs198554874	snp	G/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12850881	ACAAGCATGAGGACT[G/T]GAGTTTTCTATCTCA	288482
rs198608563	snp	C/T	0	0	intron-variant	Usp42	Rn_Celera	12:12869768	TGTGTCCTGCCTTCA[C/T]CATGCAGCCCCTAAT	288482
rs198905936	snp	C/G	0	0	intron-variant	Usp42	Rn_Celera	12:12873565	TGTCCTTATATTCTT[C/G]TAACTTGTATTTTCT	288482
rs198959463	snp	A/C	0	0	intron-variant	Usp42	Rn_Celera	12:12876218	TTGCAGCTAATTTAC[A/C]GGCTTCGCCGTTATT	288482
rs198964640	snp	A/T	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12850929	TTGAGGTGGGGTGGC[A/T]GCCCTTAGGTTCATC	288482
rs199141228	snp	C/T	0	0	intron-variant	Usp42	Rn_Celera	12:12869453	GCTGAGAGCCAGGCA[C/T]GGAATCTCATCCTCA	288482
rs199210805	snp	A/G	0	0	intron-variant	Usp42, LOC103691027	Rn_Celera	12:12850794	AAAAAAAAAAAAAAA[A/G]AAAGAAAGAAAGAAA	288482
rs199225403	snp	C/T	0	0	intron-variant	Usp42	Rn_Celera	12:12866790	GGCAAGCACTCTACC[C/T]CTGAGCTAAATCCCC	288482