iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Atg12

mRNA Expression - ArrayExpress
Gene Name	Experimental Factor	Factor Value	Experiment Accession	Array Design Accession	Expression	P-value
Atg12	growth_condition	normoxic	E-GEOD-3290	A-AFFY-20	NONDE	0.9227013
Atg12	disease_state	normal	E-MEXP-1631	A-AFFY-43	NONDE	0.17792465
Atg12	compound	corn oil	E-GEOD-4514	A-AFFY-43	NONDE	0.8678771
Atg12	disease_state	normal	E-GEOD-1843	A-AFFY-25	NONDE	0.6890195
Atg12	disease_state	normal	E-GEOD-4105	A-AFFY-25	NONDE	0.17893091
Atg12	disease_state	normal	E-GEOD-2470	A-AFFY-25	NONDE	0.08732964
Atg12	disease_state	normal	E-MEXP-874	A-AFFY-43	NONDE	0.30883327
Atg12	disease_state	normal	E-MEXP-1025	A-AFFY-20	NONDE	0.8105818
Atg12	disease_state	normal	E-MEXP-873	A-AFFY-43	NONDE	0.6092493
Atg12	disease_state	normoglycaemic	E-MEXP-889	A-AFFY-25	NONDE	0.99882394
Atg12	disease_state	normal	E-GEOD-2401	A-AFFY-25	NONDE	0.9335875
Atg12	growth_condition	normal	E-GEOD-3215	A-AFFY-25	NONDE	0.9886325
Atg12	growth_condition	normal growth media (C85)	E-MEXP-532	A-AFFY-43	NONDE	0.08523168
Atg12	growth_condition	normal growth media (bone marrow)	E-MEXP-532	A-AFFY-43	NONDE	0.2655217
Atg12	disease_state	normal	E-GEOD-1872	A-AFFY-25	NONDE	0.7621712
Atg12	disease_state	memory state not evaluated	E-MEXP-553	A-AFFY-43	NONDE	0.8519373
Atg12	disease_state	memory-unimpaired	E-MEXP-553	A-AFFY-43	NONDE	0.79006666
Atg12	disease_state	normal	E-GEOD-1781	A-AFFY-25	NONDE	0.9711555
Atg12	disease_state	normal	E-GEOD-2457	A-AFFY-25	NONDE	0.9145175
Atg12	disease_state	normal	E-MEXP-1195	A-AFFY-25	NONDE	0.94036293
Atg12	phenotype	normal	E-GEOD-2275	A-AFFY-43	NONDE	0.9022618
Atg12	growth_condition	normal	E-GEOD-2275	A-AFFY-43	NONDE	0.40154377
Atg12	disease_state	normal	E-GEOD-2270	A-AFFY-20	NONDE	0.97085905
Atg12	disease_state	normal	E-MEXP-515	A-AFFY-43	NONDE	0.7639981
Atg12	disease_state	normal	E-MEXP-515	A-AFFY-25	NONDE	0.12970775
Atg12	organism_part	extraocular muscle global layer	E-GEOD-1374	A-AFFY-25	NONDE	0.8239429
Atg12	organism_part	extraocular muscle orbital layer	E-GEOD-1374	A-AFFY-25	NONDE	0.8239429
Atg12	organism_part	aorta	E-GEOD-3290	A-AFFY-20	NONDE	0.99996907
Atg12	organism_part	ductus arteriosus	E-GEOD-3290	A-AFFY-20	NONDE	0.99996907
Atg12	organism_part	cerebral cortex	E-MEXP-1656	A-AFFY-43	NONDE	0.29699552
Atg12	organism_part	hippocampus	E-MEXP-1656	A-AFFY-43	NONDE	0.29699552
Atg12	organism_part	proximal small intestine	E-GEOD-2354	A-AFFY-25	NONDE	0.41737396
Atg12	organism_part	distal small intestine	E-GEOD-2354	A-AFFY-25	NONDE	0.98744524
Atg12	organism_part	colon	E-GEOD-2354	A-AFFY-25	NONDE	0.44166973
Atg12	organism_part	retroperitoneal fat	E-MEXP-1993	A-AFFY-43	NONDE	0.06811666
Atg12	organism_part	epididymal fat	E-MEXP-1993	A-AFFY-43	NONDE	0.06811666
Atg12	material_type	organism_part	E-AFMX-10	A-AFFY-25	NONDE	0.9183244
Atg12	cell_type	interstitial cell	E-GEOD-830	A-AFFY-25	NONDE	0.96185607
Atg12	cell_type	interstitial cell	E-GEOD-830	A-AFFY-26	NONDE	0.6663967
Atg12	organism_part	caudal ganglionic eminence	E-MEXP-570	A-AFFY-43	NONDE	0.44356158
Atg12	organism_part	cerebral cortex	E-MEXP-570	A-AFFY-43	NONDE	0.5078379
Atg12	organism_part	caudal ganglionic eminence	E-MEXP-570	A-AFFY-25	NONDE	0.9892826
Atg12	organism_part	amygdala	E-GEOD-2870	A-AFFY-43	NONDE	0.5623741
Atg12	organism_part	hippocampus	E-GEOD-2870	A-AFFY-43	NONDE	0.12912235
Atg12	organism_part	hippocampus CA3	E-GEOD-1994	A-AFFY-25	NONDE	0.1369666
Atg12	organism_part	spinal cord (T8)	E-GEOD-464	A-AFFY-20	NONDE	0.45941147
Atg12	organism_part	spinal cord (T10)	E-GEOD-464	A-AFFY-20	NONDE	0.3299584
Atg12	organism_part	frontal cortex	E-GEOD-20388	A-AFFY-43	NONDE	0.8519732
Atg12	organism_part	hippocampus	E-GEOD-20388	A-AFFY-43	NONDE	0.8519732
Atg12	organism_part	L4 and L5 dorsal root ganglia	E-GEOD-2884	A-AFFY-20	NONDE	0.8726647
Atg12	organism_part	L5 dorsal root ganglion	E-GEOD-2884	A-AFFY-20	NONDE	0.9836662
Atg12	organism_part	L4 dorsal root ganglion	E-GEOD-2884	A-AFFY-20	NONDE	0.895203
Atg12	organism_part	tibialis anterior muscle	E-GEOD-15737	A-AFFY-43	NONDE	0.10791307
Atg12	organism_part	testis	E-TABM-130	A-AFFY-43	NONDE	0.99991477
Atg12	material_type	organism_part	E-TABM-130	A-AFFY-43	NONDE	0.73186916
Atg12	organism_part	seminiferous tubule	E-TABM-130	A-AFFY-43	NONDE	0.99991477
Atg12	disease_state	bladder carcinoma	E-MTAB-104	A-AFFY-25	DOWN	0.0018359391
Atg12	organism_part	leiomyoma	E-GEOD-13319	A-AFFY-43	DOWN	6.602824E-7
Atg12	growth_condition	normoxia	E-MEXP-2863	A-AFFY-43	DOWN	0.023403414
Atg12	disease_state	normal	E-GEOD-464	A-AFFY-20	UP	0.011713636
Atg12	disease_state	normal	E-MTAB-104	A-AFFY-25	UP	0.0018359391
Atg12	organism_part	cerebellum	E-GEOD-13793	A-AFFY-25	UP	0.013463282
Atg12	organism_part	hippocampus	E-GEOD-13793	A-AFFY-25	DOWN	0.013463282
Atg12	organism_part	paraventricular nucleus	E-GEOD-4130	A-AFFY-43	UP	1.8146395E-4
Atg12	organism_part	supraoptic nucleus	E-GEOD-4130	A-AFFY-43	DOWN	0.014285045
Atg12	organism_part	neurointermediate lobe	E-GEOD-4130	A-AFFY-43	DOWN	9.476168E-4
Atg12	organism_part	kidney	E-AFMX-7	A-AFFY-25	UP	7.810298E-4
Atg12	organism_part	liver	E-GEOD-20498	A-AFFY-25	UP	3.8411314E-9
Atg12	cell_type	Sertoli cell	E-TABM-432	A-AFFY-43	DOWN	0.036052223
Atg12	organism_part	dentate gyrus	E-GEOD-1994	A-AFFY-25	UP	2.6569265E-4
Atg12	organism_part	hippocampus CA1	E-GEOD-1994	A-AFFY-25	DOWN	0.043319378
Atg12	organism_part	oculomotor nucleus	E-GEOD-3305	A-AFFY-25	UP	0.008582833
Atg12	organism_part	spinal cord	E-GEOD-3305	A-AFFY-25	DOWN	0.008582833
Atg12	organism_part	spinal cord (T9)	E-GEOD-464	A-AFFY-20	DOWN	0.024985326
Atg12	organism_part	brainstem	E-GEOD-2880	A-AFFY-43	DOWN	3.6621801E-9
Atg12	organism_part	frontal cortex	E-GEOD-2880	A-AFFY-43	UP	9.158643E-16
Atg12	organism_part	hippocampus	E-GEOD-2880	A-AFFY-43	DOWN	1.854598E-4
Atg12	organism_part	raphe magnus	E-GEOD-2270	A-AFFY-20	DOWN	0.018315604
Atg12	organism_part	somatomotor cortex	E-GEOD-2270	A-AFFY-20	UP	0.018315604
Atg12	organism_part	proximal colon	E-GEOD-15184	A-AFFY-43	DOWN	3.020686E-7
Atg12	organism_part	myometrium	E-GEOD-13319	A-AFFY-43	UP	6.602824E-7
Atg12	cell_type	Sertoli cell	E-TABM-130	A-AFFY-43	UP	0.0010477458