SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs724909 | snp | A/C | 0.483995 | 0.0880135 | intron-variant | SCAF11 | GRCh38.p7 | 12:45929928 | AGTAAAAACTGTTTC[A/C]ATTTTTGACTGTGTT | 9169 |
rs735351 | snp | A/T | 0.417683 | 0.185425 | intron-variant | SCAF11 | GRCh38.p7 | 12:45935409 | AGGCTGAGTTCCGGA[A/T]CTTACTGCCTTACCC | 9169 |
rs764192 | snp | A/C | 0.193966 | 0.243639 | intron-variant | SCAF11 | GRCh38.p7 | 12:45969244 | ACTTCTGATTCCCCG[A/C]GGCTTGAGGTACCCA | 9169 |
rs997307 | snp | A/G | 0.474634 | 0.109726 | intron-variant | SCAF11 | GRCh38.p7 | 12:45953341 | TATGAAATTTCTTAA[A/G]AGATTATATTAATGC | 9169 |
rs997308 | snp | C/T | 0.0228947 | 0.104514 | intron-variant | SCAF11 | GRCh38.p7 | 12:45953538 | AACAGAGTGAGATCC[C/T]ATCTCTGAAACATAG | 9169 |
rs1012642 | snp | C/T | 0.472147 | 0.114677 | intron-variant | SCAF11 | GRCh38.p7 | 12:45959496 | TTAGAAGGCTGAAGA[C/T]ACTTATTCCTGATCC | 9169 |
rs1047878 | snp | A/T | | | utr-variant-3-prime, intron-variant | SCAF11 | GRCh38.p7 | 12:45921265 | gccgggcatgatggc[A/T]cacgcctgtaatccc | 9169 |
rs1062905 | snp | A/T | 0.417683 | 0.185425 | intron-variant | SCAF11 | GRCh38.p7 | 12:45923221 | TTAATGTTATTTCTA[A/T]TGCATCACTAAAAGA | 9169 |
rs1291620 | snp | C/T | 0.00358779 | 0.0422022 | intron-variant | SCAF11 | GRCh38.p7 | 12:45941841 | gggtctgcttattca[C/T]gaatgtttttcaata | 9169 |
rs1291621 | snp | A/G | 0.0119091 | 0.0762411 | intron-variant | SCAF11 | GRCh38.p7 | 12:45947038 | GTGTTATAAATTAGT[A/G]ATAGGTTGAATTAAT | 9169 |
rs1291622 | snp | C/G | 0.0119091 | 0.0762411 | intron-variant | SCAF11 | GRCh38.p7 | 12:45951300 | CTAGCCAATTAAATT[C/G]TTTGAAATATGGGAA | 9169 |
rs1291623 | snp | A/T | 0.00279162 | 0.0372561 | intron-variant | SCAF11 | GRCh38.p7 | 12:45955636 | TTAACTAATACTTAC[A/T]CTATTTTTAAGTTAT | 9169 |
rs1291624 | snp | C/G/T | 0.5 | 0 | intron-variant | SCAF11 | GRCh38.p7 | 12:45972881 | ATATATATATATATA[C/G/T]ATATATATATAGATA | 9169 |
rs1291626 | snp | C/T | 0 | 0 | utr-variant-3-prime, intron-variant | SCAF11 | GRCh38.p7 | 12:45921655 | AAAGATCATACTTTA[C/T]ATTTTAACCTGACAG | 9169 |
rs1291627 | snp | A/T | 0.0119091 | 0.0762411 | intron-variant | SCAF11 | GRCh38.p7 | 12:45932636 | TTAAGTATATATTAT[A/T]TATCTAGCACCATCT | 9169 |
rs1291628 | snp | G/T | 0.188 | 0.24219 | intron-variant | SCAF11 | GRCh38.p7 | 12:45932793 | AAAGCGTGATTCAGC[G/T]GACAGCACGCAGGTA | 9169 |
rs1366023 | snp | C/T | 0.193028 | 0.243422 | intron-variant | SCAF11 | GRCh38.p7 | 12:45986378 | GAGACCAGCAGGCCT[C/T]AGTTAATAGATTGAA | 9169 |
rs1366024 | snp | A/G | 0.469049 | 0.120489 | utr-variant-3-prime, intron-variant | SCAF11 | GRCh38.p7 | 12:45919855 | AACTTGTTTGCAAAA[A/G]CTAAATGGTATAAAA | 9169 |
rs1427749 | snp | C/G | 0.215446 | 0.2476 | intron-variant | SCAF11 | GRCh38.p7 | 12:45976333 | acagtaagatatttt[C/G]agagagcccacattc | 9169 |
rs1549591 | snp | G/T | 0.209388 | 0.246679 | upstream-variant-2KB | SCAF11 | GRCh38.p7 | 12:45993430 | CCTTAATTTGAACTT[G/T]ATATTGTATTCTATT | 9169 |
rs1802104 | snp | C/T | | | synonymous-codon | SCAF11 | GRCh38.p7 | 12:45926827 | ATTTGGTAGAATTGA[C/T]AGAGATAGTTACTCT | 9169 |
rs1978598 | snp | C/G | 0.200182 | 0.244986 | intron-variant | SCAF11 | GRCh38.p7 | 12:45984023 | CTTTTAAAGTTTATA[C/G]TTATTCCTTTTTGTA | 9169 |
rs2022104 | snp | A/G | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972557 | ttgctgtcgcatcca[A/G]gctgaagtgcatggc | 9169 |
rs2408438 | snp | C/T | 0 | 0 | intron-variant | SCAF11 | GRCh38.p7 | 12:45935894 | TTTCCTGAAGATCGT[C/T]TCACAAATCCACCCT | 9169 |
rs2408439 | snp | C/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45935895 | TTCCTGAAGATCGTT[C/T]CACAAATCCACCCTA | 9169 |
rs2408440 | snp | C/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45935896 | TCCTGAAGATCGTTT[C/T]ACAAATCCACCCTAC | 9169 |
rs2408441 | snp | A/G | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45935897 | CCTGAAGATCGTTTC[A/G]CAAATCCACCCTACT | 9169 |
rs2408442 | snp | A/G | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45935900 | GAAGATCGTTTCACA[A/G]ATCCACCCTACTTGT | 9169 |
rs2897932 | snp | A/C | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45935898 | CTGAAGATCGTTTCA[A/C]AAATCCACCCTACTT | 9169 |
rs4144983 | snp | A/G | 0.406468 | 0.194981 | intron-variant | SCAF11 | GRCh38.p7 | 12:45976284 | TCAACGTCTTGTGTC[A/G]TTCCACCTTCATTTC | 9169 |
rs4768099 | snp | G/T | 0.204803 | 0.245881 | intron-variant | SCAF11 | GRCh38.p7 | 12:45958639 | TGAATTCCTTGAAAC[G/T]AAATATAATCATAGT | 9169 |
rs4768100 | snp | A/T | 0.417034 | 0.18601 | intron-variant | SCAF11 | GRCh38.p7 | 12:45965191 | ATAAGTGAATTTTTT[A/T]AAAAAAGATAGATAC | 9169 |
rs4768670 | snp | G/T | 0.418169 | 0.184985 | intron-variant | SCAF11 | GRCh38.p7 | 12:45948084 | TTTAATTCTTTTTAT[G/T]TTGTGTTATTTTTTA | 9169 |
rs4768671 | snp | C/T | 0.215446 | 0.2476 | intron-variant | SCAF11 | GRCh38.p7 | 12:45958780 | GGATTCTGACATACC[C/T]AAAGACTTTTTACTT | 9169 |
rs5797955 | in-del | -/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45969229 | ATTTTAACAGTTGCT[-/T]GGGTACCTCAAGCCT | 9169 |
rs5797956 | in-del | -/A | | | upstream-variant-2KB | SCAF11 | GRCh38.p7 | 12:45993793 | CAAAAAAAAAAAAAA[-/A]GAAAAAGAAAAAAAA | 9169 |
rs6582578 | snp | C/T | 0.19459 | 0.243782 | intron-variant | SCAF11 | GRCh38.p7 | 12:45941341 | taatgttctgatata[C/T]gtacacattgtgaaa | 9169 |
rs6582580 | snp | A/T | 0.253264 | 0.249979 | intron-variant | SCAF11 | GRCh38.p7 | 12:45987945 | GTCTATGTACTAGGA[A/T]TTCATACATTAAGTT | 9169 |
rs7298703 | snp | C/G | 0.482609 | 0.0916147 | intron-variant | SCAF11 | GRCh38.p7 | 12:45957610 | ATTTTATACAAAATG[C/G]GTGATTTTGTATAAA | 9169 |
rs7306229 | snp | C/T | 0.474091 | 0.11083 | intron-variant | SCAF11 | GRCh38.p7 | 12:45941049 | TTAGTCTTAAACATT[C/T]TGCCTGAACTCAAGA | 9169 |
rs7309711 | snp | C/T | 0.189261 | 0.242509 | intron-variant | SCAF11 | GRCh38.p7 | 12:45932499 | GTTCTGCCATCATTC[C/T]TAGAGGGTGAATGCC | 9169 |
rs7315715 | snp | A/G | | | intron-variant, upstream-variant-2KB | SCAF11 | GRCh38.p7 | 12:45961347 | ATAAAACAAAAAGCA[A/G]ACAGAAGGTGTTATT | 9169 |
rs7315731 | snp | A/T | 0.49644 | 0.0420383 | missense | SCAF11 | GRCh38.p7 | 12:45927731 | TCTTGAATATTATTG[A/T]AATCTTCATTCCCAA | 9169 |
rs7964761 | snp | C/G | 0.0154538 | 0.0865337 | intron-variant | SCAF11 | GRCh38.p7 | 12:45952109 | ATTTTAATATTCTAT[C/G]ACTTAATATTTTCCC | 9169 |
rs7965539 | snp | A/T | 0.192088 | 0.2432 | intron-variant | SCAF11 | GRCh38.p7 | 12:45935781 | ATCCAGTTCAAAAGC[A/T]GTTTCACATATTTCT | 9169 |
rs7967208 | snp | A/G | 0.493568 | 0.0563433 | intron-variant | SCAF11 | GRCh38.p7 | 12:45954293 | ctggagtgcagtggc[A/G]ctatcatgggtcact | 9169 |
rs7968005 | snp | C/T | 0.0107246 | 0.0724382 | intron-variant | SCAF11 | GRCh38.p7 | 12:45948779 | CTTATAACAGAGATA[C/T]GAACACAGATTTGTA | 9169 |
rs7968469 | snp | C/T | 0.0111196 | 0.0737302 | intron-variant | SCAF11 | GRCh38.p7 | 12:45958138 | ttaaactcctgggct[C/T]gagtgatccaccctc | 9169 |
rs7971936 | snp | G/T | 0.253264 | 0.249979 | intron-variant | SCAF11 | GRCh38.p7 | 12:45959342 | TAAAAAGATTTTAAC[G/T]TCAGGCTATCCCTTG | 9169 |
rs7972499 | snp | G/T | 0.19459 | 0.243782 | intron-variant | SCAF11 | GRCh38.p7 | 12:45987482 | GCTGATCTCACAGAA[G/T]ATAAATCACAGTGAA | 9169 |
rs7973329 | snp | C/T | 0.215446 | 0.2476 | intron-variant | SCAF11 | GRCh38.p7 | 12:45987423 | ATTCATTAACTTACA[C/T]TGAAGGCATTGTTCA | 9169 |
rs10492249 | snp | C/T | 0.0150606 | 0.0854603 | downstream-variant-500B | SCAF11 | GRCh38.p7 | 12:45919033 | CCATGATGCGAATGA[C/T]TGGTACAAATCCAAG | 9169 |
rs10506264 | snp | C/T | 0.194902 | 0.243853 | intron-variant | SCAF11 | GRCh38.p7 | 12:45957866 | TTTTTAATCACTTCT[C/T]GGCAACTGTGGGAAA | 9169 |
rs10683271 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972901 | atatatagatatata[G/T]atatatagatatata | 9169 |
rs10785592 | snp | A/G | 0.475081 | 0.108804 | intron-variant | SCAF11 | GRCh38.p7 | 12:45984158 | TTACCTTAATAAAAA[A/G]AAAAAGGGATTACTT | 9169 |
rs10785593 | snp | C/T | 0.46865 | 0.121211 | intron-variant | SCAF11 | GRCh38.p7 | 12:45990241 | ATTCCGAAACTTTGT[C/T]AGCCCTCGCGTCGCC | 9169 |
rs10785594 | snp | C/T | 0.468349 | 0.121752 | intron-variant | SCAF11 | GRCh38.p7 | 12:45990247 | AAACTTTGTCAGCCC[C/T]CGCGTCGCCCTAGGC | 9169 |
rs10785595 | snp | C/T | 0.46865 | 0.121211 | intron-variant | SCAF11 | GRCh38.p7 | 12:45990248 | AACTTTGTCAGCCCT[C/T]GCGTCGCCCTAGGCC | 9169 |
rs10880867 | snp | A/G | 0.418007 | 0.185132 | utr-variant-3-prime, intron-variant | SCAF11 | GRCh38.p7 | 12:45920609 | AGTATTAAAAAGAGA[A/G]AAAAAAAAAAACCCA | 9169 |
rs10880868 | snp | C/T | 0.284619 | 0.247591 | synonymous-codon | SCAF11 | GRCh38.p7 | 12:45928666 | ACCTGGGGCATCACA[C/T]CCAGAATTGTCTGAT | 9169 |
rs10880869 | snp | C/T | 0.147321 | 0.227941 | intron-variant | SCAF11 | GRCh38.p7 | 12:45932365 | CAATATAAGGTAAGA[C/T]TCTGGAGTAGGAGAA | 9169 |
rs10880870 | snp | C/T | 0.11275 | 0.208956 | intron-variant | SCAF11 | GRCh38.p7 | 12:45944297 | TTTAACCACAGAAGT[C/T]CAGAGATCAAAACAA | 9169 |
rs10880871 | snp | C/G | 0.47023 | 0.118317 | intron-variant | SCAF11 | GRCh38.p7 | 12:45946955 | TCTAGCAGAAGGGAT[C/G]TGAATCATTCTTCAC | 9169 |
rs10880872 | snp | C/T | 0.197703 | 0.244469 | intron-variant | SCAF11 | GRCh38.p7 | 12:45951196 | CACAGTTTTCAGTTA[C/T]TTTGGACTTAAGGTT | 9169 |
rs10880873 | snp | C/T | 0.416871 | 0.186156 | intron-variant | SCAF11 | GRCh38.p7 | 12:45966041 | GGAATATTTCCCACT[C/T]TTAGCCTATGTGTGC | 9169 |
rs10880874 | snp | A/T | 0.416871 | 0.186156 | intron-variant | SCAF11 | GRCh38.p7 | 12:45966049 | TCCCACTCTTAGCCT[A/T]TGTGTGCAACATTAG | 9169 |
rs10880875 | snp | C/T | 0.470618 | 0.117591 | intron-variant | SCAF11 | GRCh38.p7 | 12:45967236 | AAAAAAAAAACAACC[C/T]ACAATTAATATTTTA | 9169 |
rs10880876 | snp | A/C | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972914 | TATATATATAGATAT[A/C]TATATAGATATATAG | 9169 |
rs10880877 | snp | G/T | 0.0807149 | 0.183963 | intron-variant | SCAF11 | GRCh38.p7 | 12:45972921 | ATAGATATATATATA[G/T]ATATATAGATATATA | 9169 |
rs10880878 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972929 | ATATATAGATATATA[G/T]ATATATATAGATATA | 9169 |
rs10880879 | snp | C/T | 0.483199 | 0.0901004 | intron-variant | SCAF11 | GRCh38.p7 | 12:45974120 | GTATATATGTTTATA[C/T]TATACTGTAGTCCAT | 9169 |
rs10880880 | snp | A/G | 0.470618 | 0.117591 | intron-variant | SCAF11 | GRCh38.p7 | 12:45981523 | TTCTCCCATTTTCTG[A/G]GGAATAAATATAATC | 9169 |
rs10880881 | snp | C/T | 0 | 0 | intron-variant | SCAF11 | GRCh38.p7 | 12:45985299 | TTGATCAACCCCCTG[C/T]ATGTGGCCAGTTTCC | 9169 |
rs11183237 | snp | A/T | 0.0107246 | 0.0724382 | utr-variant-3-prime, intron-variant | SCAF11 | GRCh38.p7 | 12:45920014 | GCACACCTCCTTAGT[A/T]GTTTTAGATTAGAAC | 9169 |
rs11183240 | snp | A/C | 0.0460142 | 0.144533 | intron-variant | SCAF11 | GRCh38.p7 | 12:45932291 | CATTCAAACCCAAAC[A/C]ACTTCTTGGCTTTCT | 9169 |
rs11183241 | snp | C/T | 0.493154 | 0.0581045 | intron-variant | SCAF11 | GRCh38.p7 | 12:45936415 | CCAAAGTGCTGGGAT[C/T]ACAGGCATGAGCCAC | 9169 |
rs11183242 | snp | C/T | 0.0463947 | 0.145069 | intron-variant | SCAF11 | GRCh38.p7 | 12:45938357 | AGCCGGGCATGATGG[C/T]GGGCACCTGTAATCC | 9169 |
rs11183243 | snp | A/G | 0.474634 | 0.109726 | intron-variant | SCAF11 | GRCh38.p7 | 12:45942475 | AATGTACCAGATCAC[A/G]TTACTCCTGAAAACA | 9169 |
rs11183244 | snp | C/T | 0.00636936 | 0.0560724 | intron-variant | SCAF11 | GRCh38.p7 | 12:45944976 | AATAAGGCCACAGTA[C/T]GAGCTGGTCAACACC | 9169 |
rs11183245 | snp | C/T | 0.0078325 | 0.0620878 | synonymous-codon | SCAF11 | GRCh38.p7 | 12:45945250 | CTTGAAGTGGATACA[C/T]AGTAAGTTACTTTTT | 9169 |
rs11183246 | snp | A/G | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45954769 | TTAACTTTTTTCATA[A/G]AGACAGGGTCTCACT | 9169 |
rs11183247 | snp | G/T | 0.00478085 | 0.0486577 | intron-variant | SCAF11 | GRCh38.p7 | 12:45959776 | AATTTATTAATAGAT[G/T]GCTCTCTTGTTACTG | 9169 |
rs11183248 | snp | A/G | 0.195214 | 0.243923 | intron-variant, upstream-variant-2KB | SCAF11 | GRCh38.p7 | 12:45960850 | ATTAGCTGCATTCCA[A/G]TTGTTAATGTTCTTA | 9169 |
rs11183249 | snp | C/T | 0.0463947 | 0.145069 | intron-variant, upstream-variant-2KB | SCAF11 | GRCh38.p7 | 12:45961154 | ACAggaattagaaaa[C/T]cagttctaaattcac | 9169 |
rs11183250 | snp | A/T | 0.0460142 | 0.144533 | intron-variant, upstream-variant-2KB | SCAF11 | GRCh38.p7 | 12:45961483 | TTATTAACTTTTTTT[A/T]AAAAAGTATGCATTT | 9169 |
rs11183251 | snp | A/G | 0.406296 | 0.19512 | intron-variant | SCAF11 | GRCh38.p7 | 12:45962868 | TGATAAATTAAATCT[A/G]TGAGGGCCTAATTTA | 9169 |
rs11183253 | snp | C/T | 0.00438332 | 0.0466095 | intron-variant | SCAF11 | GRCh38.p7 | 12:45968255 | ATTTTCAGTAAACTT[C/T]GCTTTTCTGATTATT | 9169 |
rs11183254 | snp | A/C | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972856 | AAAGCCAGTATATAT[A/C]TATATATCGATATAT | 9169 |
rs11183255 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972857 | AAGCCAGTATATATA[G/T]ATATATCGATATATA | 9169 |
rs11183256 | snp | A/C | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972864 | TATATATATATATAT[A/C]GATATATATATATAT | 9169 |
rs11183257 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972865 | ATATATATATATATC[G/T]ATATATATATATATA | 9169 |
rs11183258 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972873 | ATATATCGATATATA[G/T]ATATATAGATATATA | 9169 |
rs11183259 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972885 | ATATATATATAGATA[G/T]ATATATAGATATATA | 9169 |
rs11183260 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972893 | ATAGATATATATATA[G/T]ATATATATATATATA | 9169 |
rs11183261 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972903 | ATATAGATATATATA[G/T]ATATAGATATATATA | 9169 |
rs11183262 | snp | G/T | 0.444444 | 0.157135 | intron-variant | SCAF11 | GRCh38.p7 | 12:45972915 | ATATATATAGATATA[G/T]ATATAGATATATAGA | 9169 |
rs11183263 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972919 | ATATAGATATATATA[G/T]AGATATATAGATATA | 9169 |
rs11183264 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972923 | AGATATATATATAGA[G/T]ATATAGATATATATA | 9169 |
rs11183265 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972931 | ATATAGATATATAGA[G/T]ATATATAGATATATA | 9169 |
rs11183266 | snp | G/T | | | intron-variant | SCAF11 | GRCh38.p7 | 12:45972935 | AGATATATAGATATA[G/T]ATAGATATATATATA | 9169 |