PPI - iRefIndex UniProt A UniProt B Method PMID Interaction Type Edge type Num Participants Q9Y6I4 P0CG48 affinity chromatography technology 22505724 physical association X 2 Q9Y6I4 Q9BRA2 biochemical 22939629 colocalization X 2 Q9Y6I4 biochemical 22939629 colocalization X 2 Q9Y6I4 P0CG48 affinity chromatography technology 23287719 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 21963094 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 23000965 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 24816145 physical association X 2 Q9Y6I4 P0CG48 enzymatic study 10480896 direct interaction X 2 Q9Y6I4 P04908 affinity chromatography technology 17980597 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 17980597 physical association X 2 Q9Y6I4 Q04637-5 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q07954 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q14152 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 A0A024QYU9 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 O00303 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 O75821 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 O15372 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q6DKJ4 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 22118674 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 21987572 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 21139048 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 21890473 physical association X 2 Q9Y6I4 P0CG48 affinity chromatography technology 21906983 physical association X 2 Q9Y6I4 Q9NUQ3-2 biochemical 22939629 colocalization X 2 Q9Y6I4 Q9H299 biochemical 22939629 colocalization X 2 Q9Y6I4 A0A024R7U9 biochemical 22939629 colocalization X 2 Q9Y6I4 O95786 affinity chromatography technology 24366338 physical association X 2 Q9Y6I4 Q9BYX4 affinity chromatography technology 24366338 physical association X 2 Q9Y6I4 Q9BYX4 enzymatic study 24366338 direct interaction X 2 Q9Y6I4 O95786 enzymatic study 24366338 direct interaction X 2 Q9Y6I4 P33778 affinity chromatography technology 17980597 physical association X 2 Q9Y6I4 O75828 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 P38405-2 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 A0A024R821 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 O15371 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q13347 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 A0A024R8M0 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q8N5D0-4 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 O15034 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q5JSZ5 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 Q9H496 affinity chromatography technology 19615732 physical association X 2 Q9Y6I4 molecular sieving 24358021 physical association C 12 Q9Y6I4 anti tag coimmunoprecipitation 19615732 physical association C 21

PPI - HINT Gene A Gene B PMID Method Quality EIF3F USP3 19615732,19615732 0004,0007 HT ISLR USP3 26186194 0004 HT RIMBP2 USP3 19615732,19615732 0004,0007 HT EIF3D USP3 19615732,19615732 0004,0007 HT EIF3H USP3 19615732,19615732 0004,0007 HT DHX15 USP3 26344197 0401 HT EIF3G USP3 19615732,19615732 0004,0007 HT CBR3 USP3 19615732,19615732 0004,0007 HT O95065 USP3 19615732 0007 HT UBC USP3 17980597,22118674 0004,0004 LC PKLR USP3 19615732,19615732 0004,0007 HT GNAL USP3 19615732,19615732 0004,0007 HT EIF3B USP3 19615732,19615732 0004,0007 HT EIF4G1 USP3 19615732 0004 HT LRP1 USP3 19615732,19615732 0004,0007 HT EIF3I USP3 19615732,19615732 0004,0007 HT EIF3A USP3 19615732,19615732 0004,0007 HT GNA13 USP3 19615732,19615732 0004,0007 HT RSU1 USP3 26344197 0401 HT Q59FG2 USP3 19615732 0004 HT PRRC2B USP3 19615732,19615732 0004,0007 HT EIF3S2 USP3 19615732 0004 HT NXN USP3 19615732,19615732 0004,0007 HT ZFAND6 USP3 22939629 0401 HT EIF3S3 USP3 19615732 0004 HT WDTC1 USP3 19615732,19615732 0004,0007 HT TOR1AIP2 USP3 19615732,19615732 0004,0007 HT EIF3C USP3 19615732,19615732 0004,0007 HT TXNDC17 USP3 22939629 0401 HT BAT2L USP3 19615732 0004 HT IFP38 USP3 19615732 0007 HT SH3BGRL3 USP3 22939629 0401 HT TXLNG USP3 22939629 0401 HT ATP6V1H USP3 22939629 0401 HT USP3 HEL-S-25 19615732 0004 HT EIF3F USP3 19615732,19615732 0004,0007 HT ISLR USP3 26186194 0004 HT RIMBP2 USP3 19615732,19615732 0004,0007 HT EIF3D USP3 19615732,19615732 0004,0007 HT EIF3H USP3 19615732,19615732 0004,0007 HT DHX15 USP3 26344197 0401 HT EIF3G USP3 19615732,19615732 0004,0007 HT CBR3 USP3 19615732,19615732 0004,0007 HT O95065 USP3 19615732 0007 HT PKLR USP3 19615732,19615732 0004,0007 HT GNAL USP3 19615732,19615732 0004,0007 HT EIF3B USP3 19615732,19615732 0004,0007 HT EIF4G1 USP3 19615732 0004 HT LRP1 USP3 19615732,19615732 0004,0007 HT EIF3I USP3 19615732,19615732 0004,0007 HT EIF3A USP3 19615732,19615732 0004,0007 HT GNA13 USP3 19615732,19615732 0004,0007 HT RSU1 USP3 26344197 0401 HT Q59FG2 USP3 19615732 0004 HT PRRC2B USP3 19615732,19615732 0004,0007 HT EIF3S2 USP3 19615732 0004 HT NXN USP3 19615732,19615732 0004,0007 HT ZFAND6 USP3 22939629 0401 HT EIF3S3 USP3 19615732 0004 HT WDTC1 USP3 19615732,19615732 0004,0007 HT TOR1AIP2 USP3 19615732,19615732 0004,0007 HT EIF3C USP3 19615732,19615732 0004,0007 HT TXNDC17 USP3 22939629 0401 HT BAT2L USP3 19615732 0004 HT IFP38 USP3 19615732 0007 HT SH3BGRL3 USP3 22939629 0401 HT TXLNG USP3 22939629 0401 HT ATP6V1H USP3 22939629 0401 HT USP3 HEL-S-25 19615732 0004 HT UBC USP3 17980597,22118674 0004,0004 LC DHX15 USP3 26344197 0401 LC DDX58 USP3 24366338,24366338 0004,0415 LC UBC USP3 10480896 0415 LC RSU1 USP3 26344197 0401 LC ZFAND6 USP3 22939629 0401 LC TXNDC17 USP3 22939629 0401 LC IFIH1 USP3 24366338,24366338 0004,0415 LC SH3BGRL3 USP3 22939629 0401 LC TXLNG USP3 22939629 0401 LC ATP6V1H USP3 22939629 0401 LC

PPI - Mentha Protein A Protein B Gene A Gene B Score PMID Q9Y6I4 Q9NUQ3 USP3 TXLNG 0.081 22939629 Q9Y6I4 Q9H299 USP3 SH3BGRL3 0.081 Q9Y6I4 B3KSH1 USP3 EIF3F 0.126 19615732 Q9Y6I4 O00303 USP3 EIF3F 0.126 19615732 Q9Y6I4 O95065 USP3 O95065 0.126 19615732 Q9Y6I4 O95786 USP3 DDX58 0.454 24366338 Q9Y6I4 P0CG48 USP3 UBC 0.454 17980597,10480896 Q9Y6I4 Q04637 USP3 EIF4G1 0.126 19615732 Q9Y6I4 Q15404 USP3 RSU1 0.081 26344197 Q9Y6I4 Q6FIF0 USP3 ZFAND6 0.081 22939629 Q9Y6I4 Q8NFQ8 USP3 TOR1AIP2 0.126 19615732 Q9Y6I4 Q9BX72 USP3 IFP38 0.126 19615732 Q9Y6I4 Q9UI12 USP3 ATP6V1H 0.081 22939629 Q9Y6I4 O43143 USP3 DHX15 0.081 26344197 Q9Y6I4 Q99613 USP3 EIF3C 0.236 19615732 Q9Y6I4 Q6DKJ4 USP3 NXN 0.236 19615732 Q9Y6I4 Q14152 USP3 EIF3A 0.236 19615732 Q9Y6I4 P55884 USP3 EIF3B 0.236 19615732 Q9Y6I4 P30613 USP3 PKLR 0.236 19615732 Q9Y6I4 O15371 USP3 EIF3D 0.236 19615732 Q9Y6I4 Q13347 USP3 EIF3I 0.236 19615732 Q9Y6I4 O15372 USP3 EIF3H 0.236 19615732 Q9Y6I4 Q07954 USP3 LRP1 0.236 19615732 Q9Y6I4 Q8N5D0 USP3 WDTC1 0.236 19615732 Q9Y6I4 Q9H496 USP3 TOR1AIP2 0.236 19615732 Q9Y6I4 O75821 USP3 EIF3G 0.236 19615732 Q9Y6I4 P38405 USP3 GNAL 0.236 19615732 Q9Y6I4 Q5JSZ5 USP3 PRRC2B 0.236 19615732 Q9Y6I4 O75828 USP3 CBR3 0.236 19615732 Q9Y6I4 O15034 USP3 RIMBP2 0.236 19615732 Q9Y6I4 Q14344 USP3 GNA13 0.236 19615732 Q9Y6I4 Q9BRA2 USP3 TXNDC17 0.081 22939629 Q9Y6I4 Q9BYX4 USP3 IFIH1 0.454 24366338 Q9Y6I4 Q15717 USP3 ELAVL1 0.126 19322201 Q9Y6I4 P68431 USP3 HIST1H3J 0.126 25281560 Q9Y6I4 O14498 USP3 ISLR 0.126 26186194