SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs751032 | snp | C/T | 0.205417 | 0.245993 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44285777 | ACAGGGAAGTGTCCC[C/T]GCGGGAGGCCCTGGC | 326 |
rs760426 | snp | A/G | 0.318656 | 0.240388 | intron-variant | AIRE | GRCh38.p7 | 21:44295931 | ATTCCACAGGGTTCA[A/G]TGTAATATGGTCTCC | 326 |
rs760427 | snp | A/G | 0.266 | 0.249487 | intron-variant | AIRE | GRCh38.p7 | 21:44296108 | GTGGGACTCCTTGCT[A/G]GTTCCCTGAGCTCCC | 326 |
rs878080 | snp | A/T | 0.417359 | 0.185718 | intron-variant | AIRE | GRCh38.p7 | 21:44288138 | CCAGCACACGCACAC[A/T]TGGGTGCACACACGA | 326 |
rs878081 | snp | C/T | 0.329464 | 0.237035 | AIRE | 21 | allele_origin=T(germline)/C(germline) | 21:44288394 | TGTGGCCATGTCCTC[C/T]GGGGACGTCCCGGGA | 326 |
rs933150 | snp | A/G | 0.370162 | 0.219229 | intron-variant | AIRE | GRCh38.p7 | 21:44292705 | TCTGCTGCTGTGAGG[A/G]TAGTAGGTCTACTGT | 326 |
rs941405 | snp | C/G | 0.482683 | 0.0914256 | intron-variant | AIRE | GRCh38.p7 | 21:44290527 | GGCCCTGGCACTTAG[C/G]AGTGACAGGAGCCAG | 326 |
rs1003853 | snp | C/T | 0.297636 | 0.24542 | intron-variant | AIRE | GRCh38.p7 | 21:44288965 | TGGTGGCAGACCCAC[C/T]GTGCCATCGGGGCAT | 326 |
rs1003854 | snp | C/T | 0.318656 | 0.240388 | intron-variant | AIRE | GRCh38.p7 | 21:44290224 | TTAATAGACAGTATT[C/T]TTTTCCTGATAATAC | 326 |
rs1055311 | snp | C/T | 0.345661 | 0.230993 | AIRE | 21 | allele_origin=T(germline)/C(germline) | 21:44289685 | GTGCATCCAGGTTGG[C/T]GGGGAGTTCTACACT | 326 |
rs1078480 | snp | C/T | 0.496483 | 0.0417852 | intron-variant | AIRE | GRCh38.p7 | 21:44291319 | CTGACTCAGAACCCC[C/T]TTCCATCTTGGATGG | 326 |
rs1133779 | snp | C/T | 0.49697 | 0.0388079 | AIRE | 21 | allele_origin=T(germline)/C(germline) | 21:44297667 | GCAGCACACCTTCGA[C/T]GGCATCCTGCAGTGG | 326 |
rs1800520 | snp | C/G | 0.266001 | 0.249495 | AIRE | 21 | allele_origin=G(germline)/C(germline) | 21:44290023 | GGGCCAGCAGGGCAG[C/G]GTTCCCGCCCCTCTG | 326 |
rs1800521 | snp | C/T | 0.470229 | 0.118319 | AIRE | 21 | allele_origin=T(germline)/C(germline) | 21:44293094 | CAAGCACCTGCCGGC[C/T]CCGCCTTCTGCAGCC | 326 |
rs1800523 | snp | G/T | | | intron-variant | AIRE | GRCh38.p7 | 21:44288475 | TAGACGCTGTGGCGG[G/T]GAGATGGGGCTGATG | 326 |
rs1800524 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44291261 | CCCGGTTCACGGCCG[A/C]CTCCACCCACTGACC | 326 |
rs1800525 | snp | A/G | 0.229329 | 0.249144 | AIRE | 21 | allele_origin=G(germline)/A(germline) | 21:44292407 | GGAGACCCCGGTATG[A/G]CCACGCCCCCTCCTA | 326 |
rs1800526 | snp | C/G | 0.403043 | 0.197681 | intron-variant | AIRE | GRCh38.p7 | 21:44294373 | CTGCTCCCCCCCAGG[C/G]CTGGCAGCCCCTCAT | 326 |
rs2072697 | snp | C/T | 0 | 0 | intron-variant | AIRE | GRCh38.p7 | 21:44288758 | GCCATGGGGTTGCAT[C/T]CTTAGAAAGTTCTGC | 326 |
rs2073609 | snp | C/T | 0.302936 | 0.244331 | intron-variant | AIRE | GRCh38.p7 | 21:44288093 | ATGCCTTCCTATCCA[C/T]TGTGCCAGCTCTGCT | 326 |
rs2073610 | snp | C/G | 0.245916 | 0.249967 | intron-variant | AIRE | GRCh38.p7 | 21:44290645 | CTGGCTGTCTGGGGG[C/G]ATTCTGGAGGAAGTG | 326 |
rs2073611 | snp | A/G | 0.102758 | 0.202039 | intron-variant | AIRE | GRCh38.p7 | 21:44290798 | CCACTGCCCTGTGAG[A/G]AAGGGTTCATGTGGT | 326 |
rs2073613 | snp | A/C/G | 0.00159617 | 0.0282053 | intron-variant | AIRE | GRCh38.p7 | 21:44291320 | CATCCAAGATGGAAA[A/C/G]GGGTTCTGAGTCAGG | 326 |
rs2075875 | snp | C/T | 0.387453 | 0.208822 | intron-variant | AIRE | GRCh38.p7 | 21:44289258 | GGGGTACCCCTGTGC[C/T]CCTTGTTCCTGGGCT | 326 |
rs2075876 | snp | A/G | 0.387263 | 0.208947 | intron-variant | AIRE | GRCh38.p7 | 21:44289270 | tgctccttgttcctg[A/G]gctcaggacccaccg | 326 |
rs2075877 | snp | A/G | 0.199564 | 0.24486 | intron-variant | AIRE | GRCh38.p7 | 21:44290169 | TCAGGGATGAGCACC[A/G]GGGCCTGAGCCCCTA | 326 |
rs2075878 | snp | C/T | 0.498481 | 0.027514 | intron-variant | AIRE | GRCh38.p7 | 21:44296649 | CCCCCCTAGCCCCCT[C/T]GCAGGAGCCCCCCCC | 326 |
rs2256817 | snp | A/G | 0.498982 | 0.0225409 | intron-variant | AIRE | GRCh38.p7 | 21:44295503 | GTCAGGAGCCCAGCC[A/G]GGCATATACGCAGAT | 326 |
rs2516560 | snp | C/T | 0.297382 | 0.245469 | intron-variant | AIRE | GRCh38.p7 | 21:44289456 | GGTGGACGTGAACTT[C/T]GGGGGACGCTGTTGA | 326 |
rs2741985 | snp | C/T | 0.496778 | 0.0400063 | intron-variant | AIRE | GRCh38.p7 | 21:44291984 | TAACAGGTGGGTCAG[C/T]TTAGGGAGGCCCCCG | 326 |
rs2776377 | snp | A/G | 0.469642 | 0.119404 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284761 | CTCGTTCTCTGGCTC[A/G]GTGGGAACACTCGTG | 326 |
rs2847225 | snp | C/G | | | intron-variant | AIRE | GRCh38.p7 | 21:44293330 | AGCGTGGGGGGCTGC[C/G]GGGGGAAGGGGACGC | 326 |
rs2847226 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44294241 | ACCCAAACCCACCCA[A/C]ACCCACCACTCCCAC | 326 |
rs2847227 | snp | C/T | 0.26518 | 0.249539 | downstream-variant-500B, upstream-variant-2KB | AIRE, PFKL | GRCh38.p7 | 21:44298509 | AGCACATGGATGGAC[C/T]GCATTGTGTTCATCT | 326 |
rs2981609 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44294294 | ttcctcaccccccac[A/C]ccccccccccccact | 326 |
rs3016736 | snp | A/T | | | intron-variant | AIRE | GRCh38.p7 | 21:44294268 | CCACTCTCCACCCAC[A/T]CCCACACCCCTTCCT | 326 |
rs3016737 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44294274 | TCCACCCACACCCAC[A/C]CCCCTTCCTCACACC | 326 |
rs3016738 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44294287 | acaccccttcctcac[A/C]ccccacacccccatc | 326 |
rs3214074 | in-del | -/A | 0.0965445 | 0.197361 | AIRE | 21 | allele_origin=A(germline)/(germline) | 21:44287633 | CCCTTCTCCCTGGCC[-/A]GGGGCAAGGGGTCAG | 326 |
rs3746964 | snp | C/T | 0.204785 | 0.245877 | AIRE | 21 | allele_origin=T(germline)/C(germline) | 21:44286105 | GCTGCACGCGCTGGC[C/T]GACCACGACGTGGTC | 326 |
rs3746965 | snp | A/G | 0.460252 | 0.135255 | intron-variant | AIRE | GRCh38.p7 | 21:44297529 | GTGCCATGGGGCCTC[A/G]GGCCTCAGTTTCCCC | 326 |
rs3746966 | snp | A/G/T | 0.00195197 | 0.0311835 | intron-variant | AIRE | GRCh38.p7 | 21:44297614 | TTCTGTGGCTGCGGC[A/G/T]GGGGCGCACCTGGAG | 326 |
rs3761388 | snp | C/G | | | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284886 | ACTGAGGCCACCCCC[C/G]CTCCAGGCCATGCCT | 326 |
rs3761389 | snp | A/G | 0.392696 | 0.205275 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44285055 | TTCCCAGATGCCCCC[A/G]GAAGCTCCTGTCCAG | 326 |
rs3761390 | snp | C/G/T | 0.00956916 | 0.0685055 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44285356 | CCCAGGCTGCCGTAC[C/G/T]GTCTCCTGCATCAGA | 326 |
rs3761391 | snp | A/G | | | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44285357 | CCAGGCTGCCGTACC[A/G]TCTCCTGCATCAGAC | 326 |
rs3788113 | snp | A/G | 0.452103 | 0.147154 | intron-variant | AIRE | GRCh38.p7 | 21:44295737 | GTGGCCCCAGACCCC[A/G]TCCTGAGCAGCTCTC | 326 |
rs5844181 | in-del | -/C | 0 | 0 | intron-variant | AIRE | GRCh38.p7 | 21:44292475 | TCCTAGGCTGGGCCA[-/C]CCCCTCCTGTCCGTC | 326 |
rs7281600 | snp | A/C/G | 0.00995342 | 0.0699012 | AIRE | 21 | allele_origin=G(germline)/A(germline) | 21:44294404 | CCTCTGCTGCAGGAC[A/C/G]GGCCTGCGCTGCAGA | 326 |
rs8127877 | snp | C/T | 0.0103295 | 0.0711199 | intron-variant | AIRE | GRCh38.p7 | 21:44291544 | CCCACCCCCAAGCCC[C/T]ACCCCAGAGTCCCAC | 326 |
rs8128448 | snp | A/C | 0.444444 | 0.157135 | intron-variant | AIRE | GRCh38.p7 | 21:44291577 | CAGACAGGGCTGGGG[A/C]GCACAGAGGCCACAG | 326 |
rs9974092 | snp | A/G | 0.17654 | 0.238964 | intron-variant | AIRE | GRCh38.p7 | 21:44297364 | CCATGAACTGCCATG[A/G]GGATGTGCCCTGGGC | 326 |
rs9974362 | snp | C/T | 0.226779 | 0.248919 | intron-variant | AIRE | GRCh38.p7 | 21:44289139 | ACAAACTGGGAGGCT[C/T]GAAATGACAGAAATG | 326 |
rs9978641 | snp | A/C | 0.0267878 | 0.112589 | utr-variant-5-prime | AIRE | GRCh38.p7 | 21:44285887 | GACCGGGGAGACGGG[A/C]GGGCGCACAGCCGGC | 326 |
rs9982393 | snp | C/T | 0.0429648 | 0.14013 | intron-variant | AIRE | GRCh38.p7 | 21:44295297 | TACTCCCCAGGAGGG[C/T]GACAGCCTACCCCAG | 326 |
rs9983695 | snp | C/T | 0.447938 | 0.152711 | intron-variant | AIRE | GRCh38.p7 | 21:44291925 | TCCTTGCCGTCTCTT[C/T]CTGCCCTTGATCACC | 326 |
rs11454989 | in-del | -/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44289278 | TTCCTGGGCTCAGGA[-/C]CCCACCGCTCCAGCC | 326 |
rs11908988 | snp | A/G | 0.0460142 | 0.144533 | intron-variant | AIRE | GRCh38.p7 | 21:44293454 | AGCCCTCCCCTCCCT[A/G]CCTCAATTCCCTTCC | 326 |
rs11910214 | snp | C/T | 0.00530819 | 0.0512437 | missense | AIRE | GRCh38.p7 | 21:44287550 | AGCCCCCCAAGAAGC[C/T]GGAGAGCAGCGCAGA | 326 |
rs11910369 | snp | C/T | 0.0150606 | 0.0854603 | intron-variant | AIRE | GRCh38.p7 | 21:44295239 | TCCCAGCTGTGCCTC[C/T]GCCCCGTATACACCG | 326 |
rs11911657 | snp | A/G | 0.00318978 | 0.0398085 | intron-variant | AIRE | GRCh38.p7 | 21:44293313 | CCTGGGGCTGTGGGG[A/G]GAGCGTGGGGGGCTG | 326 |
rs12627511 | snp | A/C | 0.375 | 0.216506 | intron-variant | AIRE | GRCh38.p7 | 21:44292462 | TGGCCACGCCCCCTC[A/C]TAGGCTGGGCCACCC | 326 |
rs28398244 | snp | C/T | 0.0437281 | 0.141251 | intron-variant | AIRE | GRCh38.p7 | 21:44296316 | GCGGCCCCTAGGCCC[C/T]GCGGCCTCTGTACCC | 326 |
rs28408186 | snp | A/G | 0.220246 | 0.248223 | intron-variant | AIRE | GRCh38.p7 | 21:44296252 | GTGCCCCCACCCCCA[A/G]TGGAGCTGGGTGTAA | 326 |
rs34219046 | snp | G/T | 0.00224399 | 0.033421 | AIRE | 21 | allele_origin=G(germline)/T(germline) | 21:44288354 | ACTGAAGCTGACATG[G/T]TCTGAATCCCTGGGA | 326 |
rs34222038 | in-del | -/CTGT | | | intron-variant | AIRE | GRCh38.p7 | 21:44296947 | TTTTAAGGGCTCTGT[-/CTGT]TTTTGCCAAGAGGAT | 326 |
rs34332800 | in-del | -/G | | | intron-variant | AIRE | GRCh38.p7 | 21:44297109 | CTGCAGAGCCCCAGG[-/G]CCTGAGAGTGGGCCA | 326 |
rs34397615 | snp | A/G | 0.00589044 | 0.0539493 | AIRE | 21 | allele_origin=G(germline)/A(germline) | 21:44289759 | CGAACCAGAGGCTTC[A/G]GGCCACTGCTGCTGC | 326 |
rs34406174 | in-del | -/CCC | | | intron-variant | AIRE | GRCh38.p7 | 21:44286371 | TGGCCTCCAGGTTCC[-/CCC]AGCCCCACCCTCAAC | 326 |
rs34586585 | multinucleotide-polymorphism | CT/TA | | | intron-variant | AIRE | GRCh38.p7 | 21:44296676 | CCCCGGCCCCTCCCC[CT/TA]GCGGGAGCCCAGTGC | 326 |
rs34595068 | in-del | -/T | | | intron-variant | AIRE | GRCh38.p7 | 21:44293254 | TTCACCTGAAACAGG[-/T]AGGAGAGGGAGGCCA | 326 |
rs34989190 | in-del | -/A | | | frameshift-variant | AIRE | GRCh38.p7 | 21:44293128 | TGCCAGGGCTGGACT[-/A]CCTCGGCCCTGCACC | 326 |
rs35090245 | in-del | -/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44293224 | CAAGGAGCCCAGGAC[-/C]TACGGGGCGGATGAA | 326 |
rs35110251 | snp | C/G/T | | | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44285688 | CCAGCCCCCAAGGCA[C/G/T]CTGCCCTGGTGGGTG | 326 |
rs35263643 | in-del | -/T | | | downstream-variant-500B, upstream-variant-2KB | AIRE, PFKL | GRCh38.p7 | 21:44298400 | TGTCCTTTTGTGTCT[-/T]GTCTTATTTTACTCA | 326 |
rs35271728 | in-del | -/A | | | intron-variant | AIRE | GRCh38.p7 | 21:44291448 | GAGGGCAGCAAAGCA[-/A]GAACAGAGGCCCAGG | 326 |
rs35695517 | in-del | -/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44287684 | CTCTGAGACCCTGTC[-/C]TAGGGGCTGGGGACG | 326 |
rs35732744 | in-del | -/G | | | intron-variant | AIRE | GRCh38.p7 | 21:44291609 | GCTGTGCCCCCCAGG[-/G]CAGGTGGGAGTTTGT | 326 |
rs35915793 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44296672 | CCCCCCCCGGCCCCT[A/C]CCCCTGCGGGAGCCC | 326 |
rs36218769 | snp | G/T | 0.000399281 | 0.0141238 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284288 | ACAGGCTGGCTCCTG[G/T]GTGGAATGTCCTGGG | 326 |
rs36218770 | snp | A/C/G | 0.00119737 | 0.0244387 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284262 | CTGGGAGCCTTGAGC[A/C/G]GGGAGCAGGGCCCTC | 326 |
rs36218771 | snp | G/T | 0.0644444 | 0.167538 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284190 | CCTTCCGAAGACCCC[G/T]AGAGGGAAGCCCCCT | 326 |
rs36218772 | snp | A/G | 0.00835141 | 0.0640778 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284101 | GCCGGGCTGCTGCTC[A/G]CTGGGTTTCCTGCCC | 326 |
rs36218773 | snp | A/G | 0.0240643 | 0.107019 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44285170 | GTGCTTTAGAAGGAA[A/G]GCGGCCAGCCCCACA | 326 |
rs36219105 | snp | C/T | 0.0209421 | 0.100162 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284969 | AGTGGGGACAGTGCC[C/T]CCAGTAAAACAAGAC | 326 |
rs36219106 | snp | C/G | | | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44284885 | GGCATGGCCTGGAGG[C/G]GGGGTGGCCTCAGTG | 326 |
rs36219107 | snp | C/G | 0.0146672 | 0.084371 | upstream-variant-2KB | AIRE | GRCh38.p7 | 21:44283838 | GGGAACCAGCGCACA[C/G]AGCTTTGGGATGACC | 326 |
rs41276642 | snp | C/T | | | missense | AIRE | GRCh38.p7 | 21:44287098 | CTCGAGCTGCCGCGC[C/T]AGCAGCCCTGACTCC | 326 |
rs41277544 | snp | A/G | 0.0793984 | 0.182743 | intron-variant | AIRE | GRCh38.p7 | 21:44288314 | AACAGTCTTCCCCAC[A/G]GGTGACCCCAATGGG | 326 |
rs41277546 | snp | C/T | 0.0258108 | 0.110631 | AIRE | 21 | allele_origin=T(germline)/C(germline) | 21:44288472 | AGGTAGACGCTGTGG[C/T]GGGGAGATGGGGCTG | 326 |
rs41277548 | snp | C/T | 0.114387 | 0.210022 | intron-variant | AIRE | GRCh38.p7 | 21:44289512 | TCCCCGGGCCCCAGA[C/T]TCGACTGGGGTGGGG | 326 |
rs41277550 | snp | C/G/T | 0.00140893 | 0.026511 | synonymous-codon | AIRE | GRCh38.p7 | 21:44289802 | CCAGGGCGCTGCCCC[C/G/T]GTAAGCACCTGACCT | 326 |
rs41277552 | snp | A/G | 0.0260105 | 0.111035 | intron-variant | AIRE | GRCh38.p7 | 21:44296328 | CCCTGCGGCCTCTGT[A/G]CCCCCACCAGGGCTG | 326 |
rs41296229 | snp | C/T | 0.124144 | 0.21601 | intron-variant | AIRE | GRCh38.p7 | 21:44294637 | CAGACGCACTGACCA[C/T]GTGCTCATTATCTGT | 326 |
rs41307215 | snp | A/C | | | intron-variant | AIRE | GRCh38.p7 | 21:44294319 | CCCACTCACCACCCA[A/C]GCCCACACCCCACAC | 326 |
rs55752112 | snp | C/T | 0.00279162 | 0.0372561 | intron-variant | AIRE | GRCh38.p7 | 21:44293600 | GGTGCTTGGGTCGCC[C/T]CTGCCTCCTGGGGAT | 326 |
rs55791826 | snp | A/C | 0.0543475 | 0.155628 | intron-variant | AIRE | GRCh38.p7 | 21:44286320 | TTGGTCCCCTTCCCC[A/C]AGCCGTCCCCACACC | 326 |
rs55840791 | snp | C/T | 3.5307e-05 | 0.00420146 | missense | AIRE | GRCh38.p7 | 21:44293888 | TGGCGCTGCCACTTC[C/T]CAGCCGGCACCTCCC | 326 |
rs55861465 | snp | C/G | 0.00597247 | 0.0543191 | intron-variant | AIRE | GRCh38.p7 | 21:44289884 | TCTGGGGGAGTGGCT[C/G]TGCTGGGGGCTGGGG | 326 |
rs55928872 | snp | A/G | 0.0142736 | 0.0832652 | intron-variant | AIRE | GRCh38.p7 | 21:44293438 | TCCCAGCACACGTGG[A/G]AGCCCTCCCCTCCCT | 326 |