DNA & RNA Element - UTRdb | Gene Name | Type | ASPicDB | UTRaspic | Refseq ID | Genome | FBXW10 | 3'UTR | 2c69f2abac | BA039974 | NM_031456 | chr17:18623337-18623387:+ | FBXW10 | 3'UTR | 0e2f86c1c3 | BA039975 | NM_031456 | chr17:18588874-18623380:+ | FBXW10 | 3'UTR | 6f04185b25 | BA039976 | NM_031456 | chr17:18623337-18623387:+ | FBXW10 | 3'UTR | 8df0e7a83f | BA039977 | NM_031456 | chr17:18623337-18623387:+ | FBXW10 | 3'UTR | d501669bd1 | BA039978 | NM_031456 | chr17:18623337-18623387:+ | FBXW10 | 5'UTR | 2c69f2abac | CA061963 | NM_031456 | chr17:18588051-18588282:+ | FBXW10 | 5'UTR | 0e2f86c1c3 | CA061964 | NM_031456 | chr17:18588110-18588282:+ | FBXW10 | 5'UTR | 6f04185b25 | CA061965 | NM_031456 | chr17:18588064-18588282:+ | FBXW10 | 5'UTR | 8df0e7a83f | CA061966 | NM_031456 | chr17:18588064-18588282:+ | FBXW10 | 5'UTR | d501669bd1 | CA061967 | NM_031456 | chr17:18588064-18588282:+ | |
DNA & RNA Element - circBase | circRNA ID | Chrom | Start | End | Strand | hsa_circ_0042352 | chr17 | 18651253 | 18654366 | + | hsa_circ_0005167 | chr17 | 18668054 | 18670175 | + | hsa_circ_0042353 | chr17 | 18653322 | 18671989 | + | |
DNA & RNA Element - circRNADb | circRNA ID | Chrom | Start | End | Strand | Samples | hsa_circ_22192 | chr17 | 18668054 | 18670175 | + | Hs68 | |
DNA & RNA Element - CircNet | Circ ID | GITPosition | Express | Symbol | Entrez | Category | Strand | Refered Name | hsa-circ-FBXW10.1 | NM_001267585Tchr17:18668054-18670175 | expressed | FBXW10 | 10517 | protein-coding | + | hsa_circ_0005167 | hsa-circ-FBXW10.12 | NR_051988Tchr17:18651253-18661818 | expressed | FBXW10 | 10517 | protein-coding | x | chr17:18651253-18661818_A549_poly(A)- | hsa-circ-FBXW10.13 | NM_001267586Tchr17:18653034-18654366 | expressed | FBXW10 | 10517 | protein-coding | x | chr17:18653034-18654366_A549_poly(A)- | hsa-circ-FBXW10.3 | NR_051988Tchr17:18653322-18671989 | expressed | FBXW10 | 10517 | protein-coding | + | hsa_circ_0042353 | hsa-circ-FBXW10.9 | NR_051988Tchr17:18651253-18654366 | none | FBXW10 | 10517 | protein-coding | + | hsa_circ_0042352 | |
DNA & RNA Element - microRNA | Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score | MIMAT0000244 | hsa-miR-30c | 10517 | FBXW10 | cgACUCUCACAUCCUAC-AAAUGu | ||:|| || ||| ||||| | cuUGGGAAAUUACAAUGUUUUACa | 2 | 22 | 7 | 30 | [hg19:17:18682618-18682641:+] | 0.5691 | 125 | 0 | -11.73 | -0.9921 | |
DNA & RNA Element - TRANSFAC | Accession | AS | Description | Species | Entrez | Pubmed | Binding Info | G033151 | | FBXW10 | Homo sapiens | 10517 | | | |
DNA & RNA Element - TargetScan | Gene Name | UTR Region Start | UTR Region End | AIR | Total Normalized 3P-seq-tags & Pseudocounts | Strand | hg19_chromosome | Genome Start | Genome End | FBXW10 | 1 | 51 | 100 | 5.01 | + | chr17 | 18682611 | 18682662 | |
DNA & RNA Element - RepTar | Gene Name | miRNA | Begin | End | Profile | FBXW10 | ebv-miR-BART6-5p | beg:0 | end:11 | pic:3' GGATACCTAACCTGGTTGGAAT 5'& ||||.||||. &5' ------------ACCAGCCTTG 3' | FBXW10 | hsa-miR-1266 | beg:0 | end:13 | pic:3' TCGGGACAAGATGTCGGGACTCC 5'& |||||.||.| &5' ------------CAGCCTTGGG- 3' | FBXW10 | hsa-miR-185star | beg:0 | end:10 | pic:3' CTGGTCTCCTTTCGGTCGGGGA 5'& ||||||.. &5' -------------CCAGCCTT- 3' | FBXW10 | hsa-miR-3127 | beg:0 | end:12 | pic:3' GAAGGGTAAGGTGTTCGGGACTA 5'& || ||||.||. &5' -----------ACCAGCCTTGG- 3' | FBXW10 | hsa-miR-4289 | beg:2 | end:25 | pic:3' ACTATCGGGAC------GTGTTACG 5'& ||||.|| .||||||. &5' ----AGCCTTGGGAAATTACAATGT 3' | FBXW10 | hsa-miR-513c | beg:0 | end:15 | pic:3' TATTTGCTGTGGA-GGAACTCTT 5'& ||| |||||.||| &5' ---------ACCAGCCTTGGGAA 3' | FBXW10 | hsa-miR-514b-5p | beg:0 | end:15 | pic:3' TACTAACGGAGGGA-GAACTCTT 5'& || ||||.||| &5' ----------CCAGCCTTGGGAA 3' | |
DNA & RNA Element - miRcode | Gene Name | Type | microRNA | Seed Position | Seed Type | Total Cons% | Tr Region | FBXW10 | High_conserved | miR-132/212/212-3p | chr17:18681910 | 8-mer | 9 | CDS | FBXW10 | High_conserved | miR-133abc | chr17:18647956 | 7-mer-m8 | 16 | CDS | FBXW10 | High_conserved | miR-9/9ab | chr17:18647685 | 8-mer | 27 | CDS | FBXW10 | High_conserved | miR-9/9ab | chr17:18681859 | 7-mer-A1 | 11 | CDS | FBXW10 | High_conserved | miR-99ab/100 | chr17:18682273 | 7-mer-m8 | 4 | CDS | FBXW10 | High_conserved | miR-135ab/135a-5p | chr17:18647339 | 7-mer-m8 | 20 | 5pUTR | FBXW10 | High_conserved | miR-141/200a | chr17:18678456 | 8-mer | 20 | CDS | FBXW10 | High_conserved | miR-146ac/146b-5p | chr17:18675756 | 7-mer-A1 | 11 | CDS | FBXW10 | High_conserved | miR-146ac/146b-5p | chr17:18675992 | 7-mer-m8 | 11 | CDS | FBXW10 | High_conserved | miR-150/5127 | chr17:18647439 | 7-mer-A1 | 18 | 5pUTR | FBXW10 | High_conserved | miR-190/190ab | chr17:18647713 | 8-mer | 11 | CDS | FBXW10 | High_conserved | miR-191 | chr17:18653203 | 7-mer-A1 | 11 | CDS | FBXW10 | High_conserved | miR-192/215 | chr17:18653398 | 7-mer-A1 | 27 | CDS | FBXW10 | High_conserved | miR-194 | chr17:18647769 | 7-mer-A1 | 24 | CDS | FBXW10 | High_conserved | miR-199ab-5p | chr17:18682485 | 7-mer-A1 | 13 | CDS | FBXW10 | High_conserved | miR-19ab | chr17:18668085 | 8-mer | 9 | CDS, ncRNA | FBXW10 | High_conserved | miR-19ab | chr17:18682153 | 8-mer | 29 | CDS | FBXW10 | High_conserved | miR-200bc/429/548a | chr17:18682105 | 7-mer-m8 | 11 | CDS | FBXW10 | High_conserved | miR-203 | chr17:18682028 | 7-mer-A1 | 20 | CDS | FBXW10 | High_conserved | miR-204/204b/211 | chr17:18647615 | 7-mer-A1 | 20 | CDS | FBXW10 | High_conserved | miR-204/204b/211 | chr17:18682571 | 7-mer-A1 | 29 | CDS | FBXW10 | High_conserved | miR-205/205ab | chr17:18673341 | 7-mer-m8 | 9 | CDS, ncRNA | FBXW10 | High_conserved | miR-205/205ab | chr17:18682427 | 7-mer-A1 | 24 | CDS | FBXW10 | High_conserved | miR-205/205ab | chr17:18682460 | 8-mer | 27 | CDS | FBXW10 | High_conserved | miR-216a | chr17:18682068 | 7-mer-m8 | 18 | CDS | FBXW10 | High_conserved | miR-216b/216b-5p | chr17:18668165 | 7-mer-m8 | 20 | CDS, ncRNA | FBXW10 | High_conserved | miR-217 | chr17:18682267 | 7-mer-A1 | 7 | CDS | FBXW10 | High_conserved | miR-218/218a | chr17:18681810 | 8-mer | 7 | CDS | FBXW10 | High_conserved | miR-22/22-3p | chr17:18682217 | 7-mer-m8 | 16 | CDS | FBXW10 | High_conserved | miR-23abc/23b-3p | chr17:18648024 | 7-mer-m8 | 16 | CDS | FBXW10 | High_conserved | miR-23abc/23b-3p | chr17:18682091 | 7-mer-A1 | 20 | CDS | FBXW10 | High_conserved | miR-24/24ab/24-3p | chr17:18653368 | 7-mer-A1 | 20 | CDS | FBXW10 | High_conserved | miR-26ab/1297/4465 | chr17:18682139 | 7-mer-A1 | 22 | CDS | FBXW10 | High_conserved | miR-27abc/27a-3p | chr17:18675928 | 7-mer-m8 | 16 | CDS | FBXW10 | High_conserved | miR-103a/107/107ab | chr17:18647982 | 7-mer-A1 | 27 | CDS | FBXW10 | High_conserved | miR-338/338-3p | chr17:18653245 | 7-mer-m8 | 16 | CDS | FBXW10 | High_conserved | miR-338/338-3p | chr17:18653332 | 8-mer | 24 | CDS | FBXW10 | High_conserved | miR-338/338-3p | chr17:18661747 | 7-mer-m8 | 22 | CDS | FBXW10 | High_conserved | miR-425/425-5p/489 | chr17:18661674 | 7-mer-m8 | 27 | CDS | FBXW10 | High_conserved | miR-125a-5p/125b-5p/351/670/4319 | chr17:18651256 | 7-mer-m8 | 11 | CDS | FBXW10 | High_conserved | miR-126-3p | chr17:18653122 | 7-mer-A1 | 11 | CDS | FBXW10 | High_conserved | miR-10abc/10a-5p | chr17:18653119 | 7-mer-A1 | 11 | CDS | FBXW10 | High_conserved | miR-455-5p | chr17:18670154 | 7-mer-m8 | 13 | CDS, ncRNA | FBXW10 | High_conserved | miR-455-5p | chr17:18675776 | 7-mer-A1 | 9 | CDS | FBXW10 | High_conserved | miR-128/128ab | chr17:18675927 | 7-mer-A1 | 16 | CDS | FBXW10 | High_conserved | miR-490-3p | chr17:18682206 | 7-mer-m8 | 16 | CDS | FBXW10 | Medium_conserved | miR-505/505-3p | chr17:18682419 | 7-mer-m8 | 18 | CDS | FBXW10 | Medium_conserved | miR-592/599 | chr17:18670073 | 8-mer | 29 | CDS, ncRNA | FBXW10 | Medium_conserved | miR-134/3118 | chr17:18681853 | 7-mer-m8 | 7 | CDS | FBXW10 | Medium_conserved | miR-874 | chr17:18673395 | 8-mer | 31 | CDS, ncRNA | FBXW10 | Medium_conserved | miR-876-5p/3167 | chr17:18667923 | 7-mer-A1 | 13 | ncRNA | FBXW10 | Medium_conserved | miR-876-5p/3167 | chr17:18682118 | 8-mer | 33 | CDS | FBXW10 | Medium_conserved | miR-149 | chr17:18647369 | 7-mer-A1 | 20 | 5pUTR | FBXW10 | Medium_conserved | miR-149 | chr17:18653370 | 7-mer-m8 | 20 | CDS | FBXW10 | Medium_conserved | miR-185/882/3473/4306/4644 | chr17:18653223 | 7-mer-A1 | 22 | CDS | FBXW10 | Medium_conserved | miR-186 | chr17:18668038 | 7-mer-m8 | 9 | ncRNA | FBXW10 | Medium_conserved | miR-186 | chr17:18673385 | 7-mer-A1 | 31 | CDS, ncRNA | FBXW10 | Medium_conserved | miR-197 | chr17:18670141 | 7-mer-A1 | 11 | CDS, ncRNA | FBXW10 | Medium_conserved | miR-28-5p/708/1407/1653/3139 | chr17:18675941 | 8-mer | 7 | CDS | FBXW10 | Medium_conserved | miR-290-5p/292-5p/371-5p/293 | chr17:18675771 | 7-mer-m8 | 44 | CDS | FBXW10 | Medium_conserved | miR-339b/339-5p/3586-5p | chr17:18647803 | 7-mer-A1 | 9 | CDS | FBXW10 | Medium_conserved | miR-339b/339-5p/3586-5p | chr17:18670047 | 7-mer-A1 | 29 | CDS, ncRNA | FBXW10 | Medium_conserved | miR-342-3p | chr17:18647609 | 7-mer-A1 | 29 | CDS | FBXW10 | Medium_conserved | miR-342-3p | chr17:18647648 | 8-mer | 16 | CDS | FBXW10 | Medium_conserved | miR-342-3p | chr17:18661775 | 7-mer-m8 | 24 | CDS | FBXW10 | Medium_conserved | miR-361-5p | chr17:18661664 | 7-mer-m8 | 9 | CDS | FBXW10 | Medium_conserved | miR-370 | chr17:18659407 | 7-mer-m8 | 16 | CDS | FBXW10 | Medium_conserved | miR-377 | chr17:18654338 | 7-mer-A1 | 24 | CDS | FBXW10 | Medium_conserved | miR-377 | chr17:18661774 | 7-mer-m8 | 27 | CDS | FBXW10 | Medium_conserved | miR-378/422a/378bcdefhi | chr17:18682168 | 7-mer-m8 | 18 | CDS | FBXW10 | Medium_conserved | miR-379/1193-5p/3529 | chr17:18647681 | 7-mer-A1 | 20 | CDS | FBXW10 | Medium_conserved | miR-421 | chr17:18682418 | 7-mer-m8 | 11 | CDS | FBXW10 | Medium_conserved | miR-125a-3p/1554 | chr17:18681890 | 8-mer | 27 | CDS | FBXW10 | Medium_conserved | miR-431 | chr17:18651268 | 7-mer-A1 | 11 | CDS | FBXW10 | Medium_conserved | miR-127/127-3p | chr17:18673306 | 7-mer-A1 | 13 | CDS, ncRNA | FBXW10 | Medium_conserved | miR-487b | chr17:18653124 | 7-mer-m8 | 11 | CDS | FBXW10 | Medium_conserved | miR-494 | chr17:18647344 | 7-mer-m8 | 22 | 5pUTR | FBXW10 | Medium_conserved | miR-495/1192 | chr17:18647767 | 7-mer-A1 | 18 | CDS | |
DNA & RNA Element - RAID2 | Gene Name | RAID ID | Interactor 1 | Category 1 | ID 1 | Interactor 2 | Category 2 | ID 2 | Methods | Score | FBXW10 | RAID01669071 | hsa-miR-30c-5p | miRNA | MIMAT0000244 | FBXW10 | mRNA | 10517 | Prediction | 0.1828 | FBXW10 | RAID04453416 | MALAT1 | lncRNA | 378938 | FBXW10 | protein | 10517 | Microarray//RNA-seq | 0.6606 | |