SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3684502 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5899534 | AGCAAGATCAGCCTA[C/T]GCCCCCTGCCTGTCA | 66616 |
rs3686322 | snp | G/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5899228 | GAGACTTAGAGGAAA[G/T]CACAATCAGCCTACT | 66616 |
rs3686338 | snp | A/G | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5899224 | CTTAGAGGAAAGCAC[A/G]ATCAGCCTACTCCCC | 66616 |
rs3692285 | snp | A/G | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5888866 | GGCTGCAAATACTAT[A/G]GGTTTAGCATATAGG | 66616 |
rs3694565 | snp | A/C/G | 0.35124 | 0.228584 | intron-variant | Snx9 | GRCm38.p3 | 17:5885430 | GCAAAGCGATGGGTG[A/C/G]AAACTGCTTCGCACT | 66616 |
rs3694705 | snp | A/C/T | 0.429688 | 0.173817 | intron-variant | Snx9 | GRCm38.p3 | 17:5885354 | GCCCTTCAAAGCTCA[A/C/T]GTTCAGCCATCACCC | 66616 |
rs6169874 | snp | A/G | 0.459184 | 0.136902 | intron-variant | Snx9 | GRCm38.p3 | 17:5912150 | TAGCTATGACTTTGC[A/G]TGGTATTTTATGCTT | 66616 |
rs6172158 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5911718 | GCCGCCTTTTAAAAC[C/T]GCTTAGTGTGGAGGG | 66616 |
rs6253312 | snp | A/G | 0.359862 | 0.224567 | intron-variant | Snx9 | GRCm38.p3 | 17:5895154 | CCAGGAAGTGCTCAA[A/G]GTCTGCAGAGGAACA | 66616 |
rs6255006 | snp | C/G | 0.5 | 0 | intron-variant | Snx9 | Mm_Celera | 17:5894844 | tcagcaaggtaaaat[C/G]acaaagtctggcatc | 66616 |
rs6255579 | snp | C/G | 0.48 | 0.0979796 | intron-variant | Snx9 | Mm_Celera | 17:5894724 | CAAGGGAGCACTCCT[C/G]TTTGTGGATGGAGAG | 66616 |
rs6357443 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5909837 | AAGATGATTTGTGGT[C/T]CCTCCCTAAGTCCCT | 66616 |
rs6358406 | snp | A/C | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5909690 | AAGCCTGACTCTCCC[A/C]CTCAGTCCACTGCCC | 66616 |
rs6371602 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5909514 | GAGGACACTCAGCTC[C/T]GCCATGCCNAGTTTC | 66616 |
rs6371614 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Snx9 | GRCm38.p3 | 17:5909505 | CAGCTCCGCCATGCC[A/G]AGTTTCTGAGAGCAG | 66616 |
rs6371977 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Snx9 | GRCm38.p3 | 17:5909498 | GCCATGCCAAGTTTC[C/T]GAGAGCAGAGGCAAA | 66616 |
rs6372075 | snp | A/G | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5909441 | GATTGCTTAGCAGCA[A/G]GTTGTTCATTTGTAA | 66616 |
rs6372634 | snp | C/T | 0.456747 | 0.140554 | intron-variant | Snx9 | GRCm38.p3 | 17:5909306 | GAAATTGCAAAGTGT[C/T]CATCACAAGTGCTAG | 66616 |
rs6389371 | snp | A/G | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5908513 | GGAGAAAGGGCCAGC[A/G]GCAGCCAGCTTNGTT | 66616 |
rs6389795 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5908501 | AGCNGCAGCCAGCTT[C/T]GTTCTGAGAGCAGAT | 66616 |
rs6389906 | snp | A/G | 0.46875 | 0.121031 | synonymous-codon | Snx9 | GRCm38.p3 | 17:5908440 | GTAGCTCTTCAGACC[A/G]TACATTTTGGAACCT | 66616 |
rs6390880 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Snx9 | GRCm38.p3 | 17:5908290 | AACACAGGCGCAACA[A/G]GGGAGAGAAATTCCG | 66616 |
rs6390940 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Snx9 | GRCm38.p3 | 17:5908260 | GTTGGGAACTGGCAG[A/C]CCTATGGAGGACACG | 66616 |
rs6390943 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | GRCm38.p3 | 17:5908259 | TTGGGAACTGGCAGA[C/T]CTATGGAGGACACGT | 66616 |
rs6391020 | snp | A/G | 0.432133 | 0.171253 | intron-variant | Snx9 | GRCm38.p3 | 17:5908217 | GGAGAACTGGCACCC[A/G]CTTACAGCGCCCATC | 66616 |
rs6392051 | snp | A/C | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5908059 | GGCTGGCTCACATTC[A/C]GAAAGCTGGAGTACA | 66616 |
rs6392087 | snp | A/G | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5908041 | AAGCTGGAGTACAGA[A/G]GATCTCCCTGGAGAC | 66616 |
rs6393719 | snp | A/C | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5914368 | GATGGCTAACTGGCC[A/C]CATGGGCAATGCAGG | 66616 |
rs6394314 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | GRCm38.p3 | 17:5914239 | aggctggagagatgg[C/T]acactggttaggggc | 66616 |
rs13470482 | snp | C/T | 0.375 | 0.216506 | synonymous-codon | Snx9 | Mm_Celera | 17:5927310 | TGGCACCATGTCTTA[C/T]GCTCTGCAAGGTAAG | 66616 |
rs13470484 | snp | A/C | | | utr-variant-3-prime | Snx9 | Mm_Celera | 17:5930623 | GGTTATGTAAACCAG[A/C]ATGGAACACAAGAGA | 66616 |
rs13470486 | snp | C/T | | | synonymous-codon | Snx9 | Mm_Celera | 17:5891839 | CGACCAAGCTTTCCT[C/T]GATTCCCTGACAGCT | 66616 |
rs13470487 | snp | C/T | 0.231111 | 0.249285 | synonymous-codon | Snx9 | Mm_Celera | 17:5902380 | AACTGGTGATGATGA[C/T]GAATGGGATGAAGAC | 66616 |
rs29499039 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5871783 | ACATTGATACTCAAA[C/T]AGACACATGACTTTT | 66616 |
rs29499877 | snp | C/T | 0.359862 | 0.224567 | intron-variant | Snx9 | Mm_Celera | 17:5896744 | AATGCCTAGCGTCAT[C/T]TCCTTATTTAAACAT | 66616 |
rs29500832 | snp | A/G | 0.265928 | 0.249492 | intron-variant | Snx9 | Mm_Celera | 17:5905095 | TATCCTGTCCTGCAT[A/G]GTTGGTGATGTGTTC | 66616 |
rs29501268 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5896440 | GCTAAGAAACAGAGC[A/G]GGTTACCGAATGCCC | 66616 |
rs29501664 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5860848 | TTCTTTTTTTTTCTT[A/T]ATTGGATATTTTCTT | 66616 |
rs29503613 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5893254 | TGTCAGGTTGCAGCT[C/G]TCTGCTCAGTCCCAG | 66616 |
rs29515684 | snp | C/T | 0.5 | 0 | intron-variant | Snx9 | Mm_Celera | 17:5890633 | GCCTGAGCATTTGCC[C/T]CTCTTGGGTGACAGA | 66616 |
rs29518128 | snp | C/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5870774 | TGGAAATATAGTTTG[C/T]GATGATGAATGTTGA | 66616 |
rs29519748 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5879510 | GTGTATAGGAAGTAG[A/T]CAGTTACACTGGACC | 66616 |
rs29521239 | snp | G/T | 0.244898 | 0.249948 | intron-variant | Snx9 | Mm_Celera | 17:5912717 | CATCTGGTCTTCCTT[G/T]CTGTAATTCCCCTTT | 66616 |
rs29522684 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5842605 | AAGTTGGGGCCCAGA[A/T]AAATTCATTTTCTCT | 66616 |
rs29534106 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5890344 | CTTACCTATGAGCCT[A/G]AGCTACAGAGGGTTT | 66616 |
rs29535820 | snp | A/G | 0.265928 | 0.249492 | intron-variant | Snx9 | Mm_Celera | 17:5904156 | CATACTTGCTCCTCC[A/G]GTTTCAACCTGTTTC | 66616 |
rs29536419 | snp | A/G | 0.345679 | 0.230967 | intron-variant | Snx9 | Mm_Celera | 17:5903776 | TTTTCCAGAAAGCCT[A/G]GTGTTTAGCACGTGT | 66616 |
rs29537068 | snp | A/G | 0.455 | 0.143091 | intron-variant | Snx9 | Mm_Celera | 17:5887217 | GAAGCTGTCACATGC[A/G]CACCTAGAGAAGTTC | 66616 |
rs29538024 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5871752 | TTATGTGAGTCCTTC[C/T]AGCTGTTTCTGAAAC | 66616 |
rs29539867 | snp | C/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5896722 | TCAGCTAGCAGAAAA[C/T]AGCCTAAATGCCTAG | 66616 |
rs33052280 | snp | C/T | 0.444444 | 0.157135 | synonymous-codon | Snx9 | Mm_Celera | 17:5927262 | AACTAGTAAAATTAC[C/T]CCCCAAGACAAGCAG | 66616 |
rs33055402 | snp | C/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5870379 | GCCAGTGCAGTGGCA[C/T]ACAGCTAGTTCTAGA | 66616 |
rs33062094 | snp | C/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5873170 | AGCACACTGAGCAAG[C/G]CAGGGGAAGCAAGCC | 66616 |
rs33066918 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5918693 | GTCAGCTCAGGGTGG[C/T]GGGGCACAGATGAAG | 66616 |
rs33073924 | snp | C/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5906596 | CCGTCTGCTCCTCTT[C/G]TGCACGTCCTCATCG | 66616 |
rs33087960 | snp | A/G | 0.24 | 0.271948 | intron-variant | Snx9 | Mm_Celera | 17:5860496 | CTGGCTTAGCGTGTG[A/G]GTCCCTGGGTCGGTC | 66616 |
rs33088936 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5860498 | GGCTTAGCGTGTGAG[A/T]CCCTGGGTCGGTCTA | 66616 |
rs33096829 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5921552 | CTGAAGAGACCCTGC[A/G]GCTGAGCTCAGCAGT | 66616 |
rs33100988 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5886491 | TCGAAAATCAGAGCT[A/G]TTTGGGAGAACTGGC | 66616 |
rs33110228 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5896718 | ATCTTCAGCTAGCAG[A/G]AAACAGCCTAAATGC | 66616 |
rs33112827 | snp | C/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5918617 | TTATTTGTCAGTCCA[C/T]GAGAAGCATGCAGTG | 66616 |
rs33128413 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5915147 | AATGCAGCATGAAAA[A/C]CCACAAGCTAAAGAG | 66616 |
rs33144880 | snp | C/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5886563 | GTGTGGAAGAGTGTC[C/T]GTGTCTGCTGTGTGA | 66616 |
rs33162592 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5905547 | TCATCCCGTACTTCG[A/G]TTGTTAGTATGTTTT | 66616 |
rs33162617 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5915681 | CACACACACACACAC[A/C]CCTTCTGGTGATGTA | 66616 |
rs33165179 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5860559 | GAATCCAGGCACCTG[A/T]GAGGCTGGTGCAGGA | 66616 |
rs33166605 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5856786 | CTACTTTTTAATGCA[A/T]TCTTCTCTATGGAAT | 66616 |
rs33168487 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5923088 | CCTTAATTCCACCAG[A/G]TAAATCTCTGGCTGC | 66616 |
rs33175449 | snp | A/C/G | 0.375 | 0.216506 | intron-variant | Snx9 | GRCm38.p3 | 17:5879524 | GACAGTTACACTGGA[A/C/G]CTGAGGCCGTGTGTA | 66616 |
rs33177009 | snp | C/T | 0.304688 | 0.243945 | intron-variant | Snx9 | Mm_Celera | 17:5858296 | GCAGGGTCAGACAGA[C/T]GACCTGGCCTGAATC | 66616 |
rs33193119 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5857625 | GGCATGTGCCACATA[C/G]CCAGCAGGAGTCCAA | 66616 |
rs33211282 | snp | A/G | 0.5 | 0 | intron-variant | Snx9 | Mm_Celera | 17:5867240 | GCTCAGCAGGGGTTA[A/G]TCAGGTGTAAAGAGG | 66616 |
rs33214552 | snp | C/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5923833 | AAAAGACAGGGGTGA[C/G]AAGAGCCCCAGGTTA | 66616 |
rs33220860 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5892748 | ACATAGTTAGACTCT[A/G]TTTCAAAAAATGAAA | 66616 |
rs33225572 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5871648 | TAAACATTTTATTTT[A/T]AAAAAACTACAACAA | 66616 |
rs33225583 | snp | C/T | 0.5 | 0 | downstream-variant-500B | Snx9 | Mm_Celera | 17:5930788 | CTACGTGCGCTGTTG[C/T]CCAGGATGGCCTTTC | 66616 |
rs33243487 | snp | A/G | 0.260355 | 0.249785 | intron-variant | Snx9 | Mm_Celera | 17:5890036 | ACAGAATTTCTAAGC[A/G]AGTCCTAACATAGCA | 66616 |
rs33244818 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5870239 | TTGACGGTGTCTTCC[A/T]AGGGAGTGTTAGGGC | 66616 |
rs33245252 | snp | A/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5879515 | TAGGAAGTAGACAGT[A/T]ACACTGGACCTGAGG | 66616 |
rs33245370 | snp | C/T | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5857677 | ACCCCTAATTACTTA[C/T]GTCAGAGTATAGTTC | 66616 |
rs33246306 | snp | A/G | 0.401235 | 0.199068 | intron-variant | Snx9 | Mm_Celera | 17:5905454 | CTAGCAGGTAAAGCC[A/G]GAGTTGATGGCACCA | 66616 |
rs33251981 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5863118 | GTAACATCCTTCAGG[A/G]TACAGAGTTCACGAC | 66616 |
rs33263145 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5886159 | TGTTAAAATAGTTGG[A/G]ATTGAAGCAGCTCTG | 66616 |
rs33273104 | snp | A/C | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5862931 | AATTCAAATTTGCAT[A/C]AAAACAAATGGTTCT | 66616 |
rs33288587 | snp | G/T | 0.260355 | 0.249785 | intron-variant | Snx9 | GRCm38.p3 | 17:5908154 | TTAGATGTGATGTTG[G/T]CTAGAACTACAGACC | 66616 |
rs33310171 | snp | A/G | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Snx9, LOC105246186 | Mm_Celera | 17:5849840 | TCCTGAAAGCACACT[A/G]GAACGCGAAGGAAGC | 66616 |
rs33311343 | snp | C/T | 0.401235 | 0.199068 | intron-variant | Snx9 | Mm_Celera | 17:5919619 | AGACACCAAGAAGAG[C/T]GAACAATGGGAGCTG | 66616 |
rs33312671 | snp | A/C | 0.387812 | 0.208586 | intron-variant | Snx9 | Mm_Celera | 17:5859278 | CCGAGGACCATCTCC[A/C]TCATAAAGTGCGTCT | 66616 |
rs33321474 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5909102 | ATGGAGCAGCCAGCA[C/T]CGCTGCTCATTTCTG | 66616 |
rs33346375 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5906726 | CAAGGATGCCTGCAC[A/G]TTTGAAGCCTGTGTA | 66616 |
rs33351423 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5896181 | GAGAGGTATGCTTTT[C/T]CTATGCGGTAATGTG | 66616 |
rs33361851 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Snx9 | Mm_Celera | 17:5915201 | GTTTAAGACTGTCAT[C/T]GTAAATTTGTTCCTC | 66616 |
rs33378813 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5870573 | GAGCTGGATATTGGC[C/T]AACAGGTACCCATTT | 66616 |
rs33380542 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5870404 | TCTAGAGGAGGAAGA[A/G]GATACAGAGAGCCAT | 66616 |
rs33381897 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Snx9 | Mm_Celera | 17:5916503 | GCTCAGCGGTTAAGA[A/G]CACTGACTGCTCTTC | 66616 |
rs33382331 | snp | A/G | 0.432133 | 0.171253 | intron-variant | Snx9 | Mm_Celera | 17:5905490 | AGTGCAATCTGTAGT[A/G]GTGAGATGATTGCTA | 66616 |
rs33405068 | snp | C/G | 0.35503 | 0.226867 | intron-variant | Snx9 | Mm_Celera | 17:5885806 | CGTGGTTTCTTTGTC[C/G]GTTGTCCTGGGCTGT | 66616 |
rs33413472 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5915785 | GGTAAGGAAGACCCA[C/T]GGGAGGACACATGAT | 66616 |
rs33415810 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Snx9 | Mm_Celera | 17:5896375 | CAGAAAGTGTTGCTC[A/G]GTGGGCATGACTGGG | 66616 |
rs33440030 | snp | A/G | 0.375 | 0.216506 | intron-variant | Snx9 | Mm_Celera | 17:5877781 | ATGTTTCTACCAACT[A/G]GGAACCAAACATTCC | 66616 |