DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Ubqln1; Plic1 ATTTA 201-1949 1978-1982;2177-2181;2285-2289;2396-2400;2556-2560;2611-2615;3624-3628 Ubqln1; Plic1 WWATTTAWW 201-1949 1976-1984

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004519 mmu-let-7g* 56085 Ubqln1 cgUUCC-GUCACCGGACAUGUCa |:|| || | :||||||| uuAGGGACAUUUAAUUGUACAGa 2 21 654 676 [mm9:13:58278561-58278583:-] 0.6594 151 7 -17.26 -1.2081 MIMAT0000137 mmu-miR-126-5p 56085 Ubqln1 gcgcaugguuuucaUUAUUAc |||||| aaauuauaauguuaAAUAAUc 2 8 1363 1383 [mm9:13:58277854-58277874:-] 0.7127 120 6 -2.29 -0.1651 MIMAT0000143 mmu-miR-9* 56085 Ubqln1 ugaaagccaauagauCGAAAUa |||||| ucuuuaaaauaacauGCUUUAu 2 8 55 76 [mm9:13:58279161-58279182:-] 0.7299 120 6 -8.69 -0.1526 MIMAT0004531 mmu-miR-135a* 56085 Ubqln1 gcggugccgagguuaGGGAUAu |||||| gcuuuuuaaacauaaCCCUAUg 2 8 308 329 [mm9:13:58278908-58278929:-] 0.7078 120 6 -12.59 -0.1375 MIMAT0000152 mmu-miR-140* 56085 Ubqln1 ggcaccaaGA-UGGGACACCAu || | :||||||| ccuuacgcCUCAGUCUGUGGUu 2 14 1594 1615 [mm9:13:58277622-58277643:-] 0.7028 144 7 -16.40 -0.3849 MIMAT0000154 mmu-miR-142-5p 56085 Ubqln1 ucaucacgaaagAUGAAAUAc |:|||||| uuuaaaauaacaUGCUUUAUu 2 10 57 77 [mm9:13:58279160-58279180:-] 0.7299 129 6 -5.83 -0.1295 MIMAT0000217 mmu-miR-188-5p 56085 Ubqln1 gggagguggUACGUUCCCUac || ||||||| acaaguaaaAU-CAAGGGAaa 3 13 1398 1417 [mm9:13:58277820-58277839:-] 0.7077 126 0 -11.57 -0.1779 MIMAT0004542 mmu-miR-191* 56085 Ubqln1 cccuuGCUUUAGGUUCACGUCg :|:|: | :||||||| guaucUGGAGGCAGAGUGCAGu 2 18 119 140 [mm9:13:58279097-58279118:-] 0.6655 153 7 -17.90 -0.2087 MIMAT0004545 mmu-miR-200b* 56085 Ubqln1 aggUUACGACGGGUCAUUCUAc |||| |||: ||||||| gcaAAUGAUGCU--GUAAGAUu 2 20 430 449 [mm9:13:58278788-58278807:-] 0.7078 160 7 -13.13 -1.0107 MIMAT0004546 mmu-miR-202-5p 56085 Ubqln1 uuucuucauaUACGUAUCCuu || |||||| cagcuuucucAUUCAUAGGca 3 12 904 924 [mm9:13:58278313-58278333:-] 0.7062 127 0 -7.95 -0.1476 MIMAT0000367 mmu-miR-291a-5p 56085 Ubqln1 ucucucccggagGU-GAAACUAc || ||||||| agaaucuuacagCAUCUUUGAUa 2 11 564 586 [mm9:13:58278651-58278673:-] 0.6338 141 7 -9.19 -1.0925 MIMAT0000367 mmu-miR-291a-5p 56085 Ubqln1 ucucucccggAGGU-GAAACUAc |::| :|||||| gaaaauguaaUUUAUUUUUGAUa 2 13 20 42 [mm9:13:58279195-58279217:-] 0.6916 127 6 -6.48 -0.1882 MIMAT0004574 mmu-miR-294* 56085 Ubqln1 ucuaucccggaGGUAAAACUCa | |||||||| agccguuuuaaCAAUUUUGAGu 2 12 1147 1168 [mm9:13:58278069-58278090:-] 0.6334 147 7 -12.70 -0.9125 MIMAT0004574 mmu-miR-294* 56085 Ubqln1 ucuaucccggAGGU-AAAACUca |::| |||||| gaaaauguaaUUUAUUUUUGAua 3 13 20 42 [mm9:13:58279195-58279217:-] 0.6916 123 0 -6.17 -0.1189 MIMAT0000375 mmu-miR-297a 56085 Ubqln1 ugUACGUGUACGUGUG-UAUGUa :| :|: ||:|:|| ||||| uuGUUUAUUUGUAUACAAUACAa 2 21 466 488 [mm9:13:58278749-58278771:-] 0.6160 128 0 -11.80 -1.1781 MIMAT0004618 mmu-miR-196a* 56085 Ubqln1 aguccgucAAAGAACAACGGcu | | | |||||| gucucucuUGUAUGGUUGCCca 3 15 1341 1362 [mm9:13:58277875-58277896:-] 0.7127 126 0 -8.49 -0.2660 MIMAT0004619 mmu-miR-200a* 56085 Ubqln1 agguCG-UGAC-AGGCCAUUCUAc || | || | | ||||||| cuuuGCAAAUGAUGCUGUAAGAUu 2 19 426 449 [mm9:13:58278788-58278811:-] 0.7078 148 7 -9.82 -1.0380 MIMAT0004620 mmu-let-7a* 56085 Ubqln1 ccuUUCUGUCAUCU-AACAUAUc || : || | ||||||| gacAAUUUUGUUUAUUUGUAUAc 2 20 459 481 [mm9:13:58278756-58278778:-] 0.7078 142 7 -6.10 -1.1391 MIMAT0004621 mmu-let-7b* 56085 Ubqln1 cccuuccgucauccAACAUAUc ||||||| acaauuuuguuuauUUGUAUAc 2 9 460 481 [mm9:13:58278756-58278777:-] 0.7078 140 7 -3.55 -1.1391 MIMAT0004622 mmu-let-7c-1* 56085 Ubqln1 ccuuucgaucuuccAACAUGUc ||||||| uuagggacauuuaaUUGUACAg 2 9 654 675 [mm9:13:58278562-58278583:-] 0.6594 140 7 -12.81 -0.9151 MIMAT0005439 mmu-let-7c-2* 56085 Ubqln1 ccuUUCUGUCAUCU-AACAUAUc || : || | ||||||| gacAAUUUUGUUUAUUUGUAUAc 2 20 459 481 [mm9:13:58278756-58278778:-] 0.7078 142 7 -6.10 -1.1391 MIMAT0004623 mmu-let-7f* 56085 Ubqln1 cccuuccguuaucuAACAUAUc ||||||| acaauuuuguuuauUUGUAUAc 2 9 460 481 [mm9:13:58278756-58278777:-] 0.7078 140 7 -5.96 -1.1370 MIMAT0004625 mmu-miR-16* 56085 Ubqln1 agUC-GUCGUG-UCAGUUAUGACc || | | || || :||||||| ccAGCCUGAACUAGGUAAUACUGg 2 21 1067 1090 [mm9:13:58278147-58278170:-] 0.6253 154 7 -21.36 -0.3875 MIMAT0004628 mmu-miR-21* 56085 Ubqln1 cuGUCGGGUAGCUG-ACGACAAc :||:: | :| | ||||||| aaUAGUUGAAUGUCGUGCUGUUc 2 21 990 1012 [mm9:13:58278225-58278247:-] 0.6657 151 7 -15.25 -0.1183 MIMAT0004628 mmu-miR-21* 56085 Ubqln1 cugucgggUAGCUGACGACAAc ||: ||||||| ucauugggAUUCUGUGCUGUUa 2 15 78 99 [mm9:13:58279138-58279159:-] 0.7299 142 7 -12.86 -0.8445 MIMAT0004636 mmu-miR-93* 56085 Ubqln1 gcccuucacgaUCGAGUCGUCa | |||||||| cuuugauaaacAUCUCAGCAGa 2 12 579 600 [mm9:13:58278637-58278658:-] 0.6338 147 7 -14.57 -0.7910 MIMAT0004636 mmu-miR-93* 56085 Ubqln1 gcccuucacgAUCGAGUCGUca || ||||||| aauguaacaaUAUCUCAGCAuu 3 13 683 704 [mm9:13:58278533-58278554:-] 0.6627 132 0 -10.10 -0.1085 MIMAT0000551 mmu-miR-323-3p 56085 Ubqln1 ucuccagcuggcacAUUACAc |||||| guugcccaaaauuaUAAUGUu 2 8 1355 1375 [mm9:13:58277862-58277882:-] 0.7127 120 6 -6.67 -0.1909 MIMAT0000556 mmu-miR-324-3p 56085 Ubqln1 ucguCGUGGACCCCGUCACc ||| |||||||||| auauGCAGGUGGGGCAGUGu 2 17 1642 1661 [mm9:13:58277576-58277595:-] 0.7028 164 7 -24.90 -0.2704 MIMAT0004640 mmu-miR-325 56085 Ubqln1 aacuauccuccacgaGUUAUUu |||||| uuaaucuccaaauaaCAAUAAa 2 8 1680 1701 [mm9:13:58277536-58277557:-] 0.7028 120 6 -5.42 -0.1481 MIMAT0000569 mmu-miR-330* 56085 Ubqln1 agagacguccgggacACGAAAcg |||||| aucuuuaaaauaacaUGCUUUau 3 9 54 76 [mm9:13:58279161-58279183:-] 0.7299 120 0 -6.34 -0.1254 MIMAT0004647 mmu-miR-338-5p 56085 Ubqln1 gugagucgugguccuAUAACAa |||||| caaacacuuggcauuUAUUGUa 2 8 216 237 [mm9:13:58279000-58279021:-] 0.6372 120 6 -16.49 -0.1900 MIMAT0004656 mmu-miR-345-3p 56085 Ubqln1 cagaggucuggggaUCAAGUCc ||||||| aauaaucuaaagugAGUUCAGa 2 9 1377 1398 [mm9:13:58277839-58277860:-] 0.7127 140 7 -13.23 -1.1136 MIMAT0004669 mmu-miR-125b-3p 56085 Ubqln1 ucGAGGGUUCUCGGAUUGGGca ||::: | | | |||||| ugCUUUUUA-AACAUAACCCua 3 21 307 327 [mm9:13:58278910-58278930:-] 0.7078 130 0 -11.90 -0.1512 MIMAT0003387 mmu-miR-376a* 56085 Ubqln1 ugAGUAU--CUUCCUCUUAGAUgg |:||| | | |||||| aaUUAUAAUGUUAAAUAAUCUAaa 3 21 1364 1387 [mm9:13:58277850-58277873:-] 0.7127 123 0 -4.58 -0.1548 MIMAT0004691 mmu-miR-382* 56085 Ubqln1 uuUUUCACAACAGG--CACUUACu |:| | |||| | ||||||| gaAGACU-UUGUACUGGUGAAUGg 2 21 1617 1639 [mm9:13:58277598-58277620:-] 0.7028 153 7 -15.43 -0.3452 MIMAT0001094 mmu-miR-412 56085 Ubqln1 gccgaucaccuggUCCACUu |||||| caagggaaauagaAGGUGAa 2 8 1409 1428 [mm9:13:58277809-58277828:-] 0.7028 120 6 -15.00 -0.1683 MIMAT0004758 mmu-miR-463 56085 Ubqln1 gauggaauauaccacAGAUAGu |||||| ------cagcaucucUCUAUCc 2 8 1 16 [mm9:13:58279221-58279236:-] 0.6533 120 6 -6.37 -0.1247 MIMAT0002107 mmu-miR-466a-3p 56085 Ubqln1 agaAUACACA-CG-CACAUACAUau |||| || |: | |||||| cccUAUG-GUAGUAAUUUAUGUAga 3 21 323 346 [mm9:13:58278891-58278914:-] 0.7078 128 0 -6.53 -0.2950 MIMAT0002108 mmu-miR-467a-1* 56085 Ubqln1 cacauccACACACAUACAUAUa ||| | | |||||| acaauuuUGUUUAUUUGUAUAc 2 16 460 481 [mm9:13:58278756-58278777:-] 0.7078 127 6 -4.38 -0.1938 MIMAT0002108 mmu-miR-467a-1* 56085 Ubqln1 cacAU-CCA-CA-CACAUACAUAUa || ||| || | |||||| | cccUAUGGUAGUAAUUUAUGUAGAa 2 20 323 347 [mm9:13:58278890-58278914:-] 0.7078 120 0 -6.88 -0.1176 MIMAT0004760 mmu-miR-470* 56085 Ubqln1 agaagagucuuucCAUGACCAa |||||||| guuggaagacuuuGUACUGGUg 2 10 1613 1634 [mm9:13:58277603-58277624:-] 0.7028 145 7 -14.41 -0.3800 MIMAT0002889 mmu-miR-532-5p 56085 Ubqln1 ugccaggAUGUGAGUUCCGUAc || | | ||||||| auuuaugUAGAAUAAAGGCAUu 2 16 336 357 [mm9:13:58278880-58278901:-] 0.7078 151 7 -9.28 -1.1862 MIMAT0004789 mmu-miR-450a-3p 56085 Ubqln1 uacuuacguuucGUAGGGGUUa | ||||||| gccucuuucuucCUUCCCCAAa 2 11 1187 1208 [mm9:13:58278029-58278050:-] 0.6634 142 7 -10.66 -1.0310 MIMAT0004789 mmu-miR-450a-3p 56085 Ubqln1 uacuuacguuucgUAGGGGUUa |||:|||| guuugauuuauuaAUCUCCAAa 2 10 1670 1691 [mm9:13:58277546-58277567:-] 0.7028 129 0 -10.10 -0.1398 MIMAT0004790 mmu-miR-503* 56085 Ubqln1 gguccgucACCUUUGUUAUGag || | ||||||| uguuuauuUGUAUACAAUACaa 3 15 467 488 [mm9:13:58278749-58278770:-] 0.6160 134 0 -7.78 -0.1438 MIMAT0003189 mmu-miR-291b-5p 56085 Ubqln1 ccucucccggagGU-GAAACUAg || ||||||| agaaucuuacagCAUCUUUGAUa 2 11 564 586 [mm9:13:58278651-58278673:-] 0.6338 141 7 -12.59 -1.0925 MIMAT0003189 mmu-miR-291b-5p 56085 Ubqln1 ccucucccggAGGU-GAAACUAg |::| :|||||| gaaaauguaaUUUAUUUUUGAUa 2 13 20 42 [mm9:13:58279195-58279217:-] 0.6916 127 6 -9.88 -0.1882 MIMAT0003190 mmu-miR-291b-3p 56085 Ubqln1 uguuuguuuuACC-UACGUGAAa ||| |||||||| guugugacuuUGGCAUGCACUUu 2 13 407 429 [mm9:13:58278808-58278830:-] 0.7078 151 7 -16.02 -0.4504 MIMAT0003373 mmu-miR-302b* 56085 Ubqln1 ucUUUCGUAAGGGUACAAUUUca ||| ||| : |||||||| ccAAA--AUUAUAAUGUUAAAua 3 22 1360 1380 [mm9:13:58277857-58277877:-] 0.7127 142 0 -6.17 -0.2674 MIMAT0003375 mmu-miR-302c* 56085 Ubqln1 cguccaUUGG-GGUACAAUUUcg ||:: : |||||||| gcccaaAAUUAUAAUGUUAAAua 3 17 1358 1380 [mm9:13:58277857-58277879:-] 0.7127 131 0 -9.28 -0.2721 MIMAT0003733 mmu-miR-665 56085 Ubqln1 uccCUGGAGUCGGAGGACca || :|:| |||||| uaaGA-UUUAUACUCCUGac 3 18 443 461 [mm9:13:58278776-58278794:-] 0.7078 127 0 -14.41 -0.3255 MIMAT0004822 mmu-miR-770-5p 56085 Ubqln1 gcaCCGGGUC---UGUGCAC-CACGa ||| ||| :||:||| |||| gucGGCACAGCCUGCAUGUGUGUGCu 2 20 1561 1586 [mm9:13:58277651-58277676:-] 0.7028 126 0 -24.95 -0.1306 MIMAT0015219 mmu-miR-3475 56085 Ubqln1 aaguUUGGUACACGGAGGUCu ||| || :|||||| aaauAACAAUAAAUCUCCAGc 2 18 1689 1709 [mm9:13:58277528-58277548:-] 0.7028 137 6 -12.78 -0.4604 MIMAT0003736 mmu-miR-670 56085 Ubqln1 aagugGUGUAUGUGAG-UCCCUa || :|| | || ||||| ucagaCAAGUAAAAUCAAGGGAa 2 18 1394 1416 [mm9:13:58277821-58277843:-] 0.7077 121 0 -12.79 -1.2897 MIMAT0003896 mmu-miR-763 56085 Ubqln1 cgGUGACCAAGAAGGGUCGAcc || | ||| |||||| aaCAAUAAAUCU--CCAGCUuu 3 21 1693 1712 [mm9:13:58277525-58277544:-] 0.7028 125 0 -11.48 -0.1031 MIMAT0003896 mmu-miR-763 56085 Ubqln1 cggUGACCAAGAAGGGUC-GACc :| |||| ||||| ||| gagGCAGGUUGGCCCCAGACUGu 2 20 1469 1491 [mm9:13:58277746-58277768:-] 0.7028 123 0 -18.94 -0.3871 MIMAT0003740 mmu-miR-674 56085 Ubqln1 augUGGUGAGGGUAGAG-UCACg :|||||: : |||| |||| ugaGCCACUUGUUUCUCAAGUGu 2 20 948 970 [mm9:13:58278267-58278289:-] 0.7062 131 0 -21.61 -0.3561 MIMAT0003741 mmu-miR-674* 56085 Ubqln1 aacaAGACUCUACCCUCGACAc | | | | ||||||| gccaUAUAAAAGUAGAGCUGUc 2 19 870 891 [mm9:13:58278346-58278367:-] 0.6844 142 7 -10.22 -0.8612 MIMAT0003449 mmu-miR-488* 56085 Ubqln1 aacucucacgaUAAUAGACCc | ||||||| aaccaauaggaAGUAUCUGGa 2 11 107 127 [mm9:13:58279110-58279130:-] 0.7299 142 7 -10.27 -0.5645 MIMAT0003457 mmu-miR-680 56085 Ubqln1 ggggGUACAGUCGUCU--ACGGg ||| |||||||| |||| uaaaCAUCUCAGCAGAAGUGCCa 2 18 585 607 [mm9:13:58278630-58278652:-] 0.5935 125 0 -22.34 -0.7281 MIMAT0003461 mmu-miR-683 56085 Ubqln1 cuccugugUCGAAUGUCGUcc | ||||||||| uguguagaAUCUUACAGCAuc 3 14 559 579 [mm9:13:58278658-58278678:-] 0.6742 137 0 -12.96 -0.1030 MIMAT0003474 mmu-miR-694 56085 Ubqln1 gaaguccguugUAAAAGUc |||||:| cauuuauuguaAUUUUUAa 2 9 227 245 [mm9:13:58278992-58279010:-] 0.6372 124 0 -2.30 -0.1132 MIMAT0003478 mmu-miR-467b* 56085 Ubqln1 cacaaccACACACAUACAUAUa ||| | | |||||| acaauuuUGUUUAUUUGUAUAc 2 16 460 481 [mm9:13:58278756-58278777:-] 0.7078 127 6 -4.38 -0.1938 MIMAT0003478 mmu-miR-467b* 56085 Ubqln1 cacaACCA-CA-CACAUACAUAUa |||| || | |||||| | ccuaUGGUAGUAAUUUAUGUAGAa 2 19 324 347 [mm9:13:58278890-58278913:-] 0.7078 124 0 -8.67 -0.1176 MIMAT0003480 mmu-miR-297b-5p 56085 Ubqln1 uguACAAGU--ACGUGUG-UAUGUa ||||:| ||:|:|| ||||| uuuUGUUUAUUUGUAUACAAUACAa 2 20 464 488 [mm9:13:58278749-58278773:-] 0.6160 134 0 -14.78 -1.1781 MIMAT0004827 mmu-miR-297b-3p 56085 Ubqln1 auacCCAUACA-CACAUACAUau |||| || | |||||| cuauGGUA-GUAAUUUAUGUAga 3 19 325 346 [mm9:13:58278891-58278912:-] 0.7078 131 0 -8.42 -0.2900 MIMAT0003493 mmu-miR-703 56085 Ubqln1 aagaAAGGAAGACUUC-CAAAa || :|||| ||| |||| ccacUUGUUUCUCAAGUGUUUg 2 18 952 973 [mm9:13:58278264-58278285:-] 0.7062 129 0 -11.63 -0.3917 MIMAT0003496 mmu-miR-706 56085 Ubqln1 aaaaaACUCUGU-CCCAAAGAGa |||| || ||||||| auuagUGAGCCACUUGUUUCUCa 2 18 943 965 [mm9:13:58278272-58278294:-] 0.7062 152 7 -13.65 -1.0439 MIMAT0003781 mmu-miR-676* 56085 Ubqln1 cguUCAGGAUUCCA-ACAUCUca :|| ||| | |||||| uauGGUAGUAAUUUAUGUAGAau 3 20 326 348 [mm9:13:58278889-58278911:-] 0.7078 130 0 -6.78 -0.1246 MIMAT0004236 mmu-miR-741 56085 Ubqln1 agauguaucuuacCGUAGAGAGu ||||||||| -----------caGCAUCUCUCu 2 11 1 12 [mm9:13:58279225-58279236:-] 0.6533 150 7 -15.29 -0.9475 MIMAT0004838 mmu-miR-742* 56085 Ubqln1 acuAAUCGUUGG--UACACUCAu | | :||:| | |||||| uguUAAAUAAUCUAAAGUGAGUu 2 19 1372 1394 [mm9:13:58277843-58277865:-] 0.7127 121 6 -11.39 -0.1204 MIMAT0004238 mmu-miR-743a 56085 Ubqln1 agaugagUCGAA-CCACAGAAAg :|:|| |||||||| acgggcgGGUUUCUGUGUCUUUu 2 16 144 166 [mm9:13:58279071-58279093:-] 0.6011 150 7 -14.56 -0.2739 MIMAT0004839 mmu-miR-743b-5p 56085 Ubqln1 acuACCUGUGGUCAGACU-UGu || |:||: ||||| || gacUGUAUACUUUUCUGACACu 2 19 1486 1507 [mm9:13:58277730-58277751:-] 0.7028 122 0 -12.57 -0.9883 MIMAT0004840 mmu-miR-743b-3p 56085 Ubqln1 agauaagucguacUACAGAAAg :||||||| cgggcggguuucuGUGUCUUUu 2 10 145 166 [mm9:13:58279071-58279092:-] 0.6011 141 7 -11.24 -0.2762 MIMAT0004845 mmu-miR-881* 56085 Ubqln1 ucUACACUGACAAUAGAGAGAc | || ||||| :||||||| uuAGGUCACUGUAGUCUCUCUu 2 21 1328 1349 [mm9:13:58277888-58277909:-] 0.7127 172 7 -20.31 -0.6992 MIMAT0004845 mmu-miR-881* 56085 Ubqln1 ucuacacugacaaUAGAGAGAc |||||||| ---------cagcAUCUCUCUa 2 10 1 13 [mm9:13:58279224-58279236:-] 0.6533 145 7 -10.34 -1.1403 MIMAT0004848 mmu-miR-883a-5p 56085 Ubqln1 cauUGACGAUG-AAGAGAGUCGu | ||: || | ||||||| cauAAUGUAACAAUAUCUCAGCa 2 20 680 702 [mm9:13:58278535-58278557:-] 0.6627 150 7 -15.56 -1.2592 MIMAT0004848 mmu-miR-883a-5p 56085 Ubqln1 cauuGACGAUGAAGAGAGUCGu :|| || ||||||| aucuUUGAUAAACAUCUCAGCa 2 19 577 598 [mm9:13:58278639-58278660:-] 0.6338 146 7 -15.15 -1.0222 MIMAT0004850 mmu-miR-883b-5p 56085 Ubqln1 acUGACGAUGGGUA-AGAGUCau | || || | || |||||| auAAUG-UAACAAUAUCUCAGca 3 21 681 702 [mm9:13:58278535-58278556:-] 0.6627 133 0 -11.02 -0.2281 MIMAT0004850 mmu-miR-883b-5p 56085 Ubqln1 acugaCGAUGGGU-AAGAG-UCAu || ||::: ||||| ||| agugaGCCACUUGUUUCUCAAGUg 2 18 946 969 [mm9:13:58278268-58278291:-] 0.7062 120 0 -14.36 -0.6464 MIMAT0004856 mmu-miR-105 56085 Ubqln1 uggUGUUCGUAGACUC-GUGAACc |::| :| |||| |||||| uaaAUGAUUA-GUGAGCCACUUGu 2 21 937 959 [mm9:13:58278278-58278300:-] 0.7062 122 6 -12.26 -0.7003 MIMAT0004864 mmu-miR-297a* 56085 Ubqln1 auacCCAUACA-CACAUACAUau |||| || | |||||| cuauGGUA-GUAAUUUAUGUAga 3 19 325 346 [mm9:13:58278891-58278912:-] 0.7078 131 0 -8.42 -0.2900 MIMAT0004865 mmu-miR-297c 56085 Ubqln1 ugUACAUGUACGUGUG-UAUGUa :| ||: ||:|:|| ||||| uuGUUUAUUUGUAUACAAUACAa 2 21 466 488 [mm9:13:58278749-58278771:-] 0.6160 132 0 -12.17 -1.1763 MIMAT0004866 mmu-miR-297c* 56085 Ubqln1 auacCCAUACA-CACAUACAUau |||| || | |||||| cuauGGUA-GUAAUUUAUGUAga 3 19 325 346 [mm9:13:58278891-58278912:-] 0.7078 131 0 -8.42 -0.2900 MIMAT0004868 mmu-miR-343 56085 Ubqln1 agacccgUGUACUUCCCUcu | || |||||| acaaguaAAAUCAAGGGAaa 3 14 1398 1417 [mm9:13:58277820-58277839:-] 0.7077 129 0 -8.33 -0.1762 MIMAT0004876 mmu-miR-466b-3p 56085 Ubqln1 agaAUACACA-CG-CACAUACAUau |||| || |: | |||||| cccUAUG-GUAGUAAUUUAUGUAga 3 21 323 346 [mm9:13:58278891-58278914:-] 0.7078 128 0 -6.53 -0.2950 MIMAT0005453 mmu-miR-466b-3-3p 56085 Ubqln1 agaAUACACA-CG-CACAUACAUaa |||| || |: | |||||| cccUAUG-GUAGUAAUUUAUGUAga 3 21 323 346 [mm9:13:58278891-58278914:-] 0.7078 128 0 -6.53 -0.2950 MIMAT0004878 mmu-miR-466c-3p 56085 Ubqln1 agaAUACACA-CG-CACAUACAUau |||| || |: | |||||| cccUAUG-GUAGUAAUUUAUGUAga 3 21 323 346 [mm9:13:58278891-58278914:-] 0.7078 128 0 -6.53 -0.2950 MIMAT0004880 mmu-miR-466e-3p 56085 Ubqln1 agaAUACACA-CG-CACAUACAUau |||| || |: | |||||| cccUAUG-GUAGUAAUUUAUGUAga 3 21 323 346 [mm9:13:58278891-58278914:-] 0.7078 128 0 -6.53 -0.2950 MIMAT0004883 mmu-miR-466g 56085 Ubqln1 acacacacguacacAGACAUa |||||| aucuaagcaaaauuUCUGUAa 2 8 510 530 [mm9:13:58278707-58278727:-] 0.5692 120 6 -7.88 -0.1111 MIMAT0004887 mmu-miR-467d* 56085 Ubqln1 cacauccACACACAUACAUAUa ||| | | |||||| acaauuuUGUUUAUUUGUAUAc 2 16 460 481 [mm9:13:58278756-58278777:-] 0.7078 127 6 -4.38 -0.1938 MIMAT0004887 mmu-miR-467d* 56085 Ubqln1 cacAU-CCA-CA-CACAUACAUAUa || ||| || | |||||| | cccUAUGGUAGUAAUUUAUGUAGAa 2 20 323 347 [mm9:13:58278890-58278914:-] 0.7078 120 0 -6.88 -0.1176 MIMAT0004890 mmu-miR-509-5p 56085 Ubqln1 uacUAACGGUGUAA--GACC-UCAu | ||:|:| || |||| ||| ugaAAUGUCGCUUUCACUGGAAGUg 2 20 825 849 [mm9:13:58278388-58278412:-] 0.6627 122 0 -17.24 -0.1436 MIMAT0004892 mmu-miR-568 56085 Ubqln1 cacACAUAUGUAAAUAUGUa ||| ||: | |||||| uuuUGUUUAUUUGUAUACAa 2 18 464 483 [mm9:13:58278754-58278773:-] 0.7078 133 6 -7.79 -0.2764 MIMAT0004898 mmu-miR-654-3p 56085 Ubqln1 uuccACUACCAGUCGUCUGUau | || || | |||||| cauuUAAUUGU-A-CAGACAac 3 19 661 680 [mm9:13:58278557-58278576:-] 0.6610 126 0 -8.23 -0.1174 MIMAT0004898 mmu-miR-654-3p 56085 Ubqln1 uucCACUACCAGUCGUCUGUau |||| ||: |||||| aaaGUGA--GUU--CAGACAag 3 20 1385 1402 [mm9:13:58277835-58277852:-] 0.7127 125 0 -10.98 -0.1815 MIMAT0004931 mmu-miR-466d-3p 56085 Ubqln1 gaUACACA-CG-CACAUACAUau ||| || |: | |||||| cuAUG-GUAGUAAUUUAUGUAga 3 20 325 346 [mm9:13:58278891-58278912:-] 0.7078 123 0 -9.12 -0.2950 MIMAT0004940 mmu-miR-511 56085 Ubqln1 acucACGUCUCGUUUUCCGUa ||:||| : ||||||| uuuaUGUAGAAU-AAAGGCAu 2 18 337 356 [mm9:13:58278881-58278900:-] 0.7078 155 7 -17.37 -1.1475 MIMAT0005294 mmu-miR-467e* 56085 Ubqln1 uauauccACACACAUACAUAUa ||| | | |||||| acaauuuUGUUUAUUUGUAUAc 2 16 460 481 [mm9:13:58278756-58278777:-] 0.7078 127 6 -4.38 -0.1938 MIMAT0005294 mmu-miR-467e* 56085 Ubqln1 uaUAUCCACA-CACAUACAUAUa ||:| || | |||||| | cuAUGGUAGUAAUUUAUGUAGAa 2 21 325 347 [mm9:13:58278890-58278912:-] 0.7078 123 0 -6.85 -0.1176 MIMAT0005830 mmu-miR-466l 56085 Ubqln1 uuauACACACGUACA-UAAAUAu || | |||| |||||| auccUGAGAAAAUGUAAUUUAUu 2 19 13 35 [mm9:13:58279202-58279224:-] 0.6916 122 6 -5.84 -1.1660 MIMAT0005830 mmu-miR-466l 56085 Ubqln1 uuauacacacguacaUAAAUAu |||||| aacccuaugguaguaAUUUAUg 2 8 321 342 [mm9:13:58278895-58278916:-] 0.7078 120 6 -7.09 -0.1012 MIMAT0005831 mmu-miR-669k 56085 Ubqln1 aacguacgcacAUAUACGUAu | ||||||| ucugugaagauUCUAUGCAUa 2 11 1101 1121 [mm9:13:58278116-58278136:-] 0.6419 142 7 -10.68 -0.9713 MIMAT0005839 mmu-miR-669f 56085 Ubqln1 uaugcACACACACAUACAUAUac | ||| | | |||||| acaauUUUGUUUAUUUGUAUAca 3 19 460 482 [mm9:13:58278755-58278777:-] 0.7078 138 0 -4.18 -0.2593 MIMAT0005842 mmu-miR-669h-3p 56085 Ubqln1 acACGUAC-ACACAUAUACGUAu | ::|| | | ||||||| auUCUGUGAAGAUUCUAUGCAUa 2 21 1099 1121 [mm9:13:58278116-58278138:-] 0.6419 143 7 -11.15 -0.9713 MIMAT0005846 mmu-miR-467f 56085 Ubqln1 acauccACACACACACAUAUa ||| | | |||||| caauuuUGUUUAUUUGUAUAc 2 16 461 481 [mm9:13:58278756-58278776:-] 0.7078 127 6 -3.70 -0.1938 MIMAT0005854 mmu-miR-467g 56085 Ubqln1 uauAUA-CA-CA-CACAUACAUau ||| || || | |||||| cccUAUGGUAGUAAUUUAUGUAga 3 19 323 346 [mm9:13:58278891-58278914:-] 0.7078 127 0 -6.46 -0.2950 MIMAT0007864 mmu-miR-1897-5p 56085 Ubqln1 gggggagaaagagguAGGUUUc |||||| uuugauuuauuaaucUCCAAAu 2 8 1671 1692 [mm9:13:58277545-58277566:-] 0.7028 120 6 -7.32 -0.2392 MIMAT0007871 mmu-miR-1892 56085 Ubqln1 uaGGAGGGAGGGCAGGGGUUUa :||::||:|| |||||||| ccUCUUUCUUCCUUCCCCAAAg 2 21 1188 1209 [mm9:13:58278028-58278049:-] 0.6634 176 7 -28.50 -0.7375 MIMAT0007871 mmu-miR-1892 56085 Ubqln1 uaggagggagggcagGGGUUUa |||||| ucucuuguaugguugCCCAAAa 2 8 1344 1365 [mm9:13:58277872-58277893:-] 0.7127 120 6 -16.63 -0.3268 MIMAT0007872 mmu-miR-1906 56085 Ubqln1 ucGGGACGGAGUCCGACGACGu ::||| :| |||||||||| ucUUCUGGUUAAGGCUGCUGCa 2 21 189 210 [mm9:13:58279027-58279048:-] 0.6372 172 7 -30.32 -0.5559 MIMAT0007874 mmu-miR-1904 56085 Ubqln1 ggagggaggucuccUCGUCUUg ||||||| uugauaaacaucucAGCAGAAg 2 9 581 602 [mm9:13:58278635-58278656:-] 0.6338 140 7 -13.20 -0.3518 MIMAT0009391 mmu-miR-1928 56085 Ubqln1 cucgaccguUACAUCga |||||| uaguaauuuAUGUAGaa 3 9 331 347 [mm9:13:58278890-58278906:-] 0.7078 120 0 -7.22 -0.2812 MIMAT0009397 mmu-miR-1933-3p 56085 Ubqln1 uaucagugugacuacCAGGACc |||||| ggugaacaaauuuuuGUCCUGc 2 8 269 290 [mm9:13:58278947-58278968:-] 0.7078 120 6 -11.76 -0.1442 MIMAT0009398 mmu-miR-1934 56085 Ubqln1 ucuccugcuucgucCCCUGGUCu |||||||| ugauacauuccuuuGGGACCAGu 2 10 1244 1266 [mm9:13:58277971-58277993:-] 0.6905 145 7 -16.90 -0.7341 MIMAT0009399 mmu-miR-1935 56085 Ubqln1 ucucUAGGCGGUCGGAGACGGa :| :||: :||||||| auguGUGUGCU-CUCUCUGCCu 2 19 1576 1596 [mm9:13:58277641-58277661:-] 0.7028 144 7 -21.01 -0.5042 MIMAT0009405 mmu-miR-1941-5p 56085 Ubqln1 uucggAGACAUGGUCG-UAGAGGga |:|| ::| : |||||| agcagUUUGAUUUAUUAAUCUCCaa 3 20 1666 1690 [mm9:13:58277547-58277571:-] 0.7028 126 0 -14.66 -0.3066 MIMAT0009405 mmu-miR-1941-5p 56085 Ubqln1 uucggagacAUGGUCG--UAGAGGga || || : |||||| aucuccaaaUAACAAUAAAUCUCCag 3 16 1683 1708 [mm9:13:58277529-58277554:-] 0.7028 122 0 -13.33 -0.2386 MIMAT0009415 mmu-miR-1948 56085 Ubqln1 gacaUGCU-CACGA--GACGGAUUu | || || || :||||||| cccaAAGACGUUCUACUUGCCUAAc 2 19 1203 1227 [mm9:13:58278010-58278034:-] 0.6933 148 7 -13.15 -0.7938 MIMAT0009419 mmu-miR-669m 56085 Ubqln1 uaUACAAACACACCUACAUAUa || ||||| | |||||| caAU-UUUGUUUAUUUGUAUAc 2 21 461 481 [mm9:13:58278756-58278776:-] 0.7078 130 6 -6.44 -0.1884 MIMAT0009423 mmu-miR-1952 56085 Ubqln1 gucUUCC--UCCCACCUCu |||| ||||||||| acaAAGGUCAGGGUGGAGg 2 15 1529 1547 [mm9:13:58277690-58277708:-] 0.7028 157 7 -25.34 -0.2786 MIMAT0009431 mmu-miR-1958 56085 Ubqln1 ugAAUGACG---AAGGUGAAAGGAu | :|||: || | ||||||| aaUGGCUGUAAAUUAC-CUUUCCUu 2 21 709 732 [mm9:13:58278505-58278528:-] 0.6627 145 7 -14.30 -0.4864 MIMAT0009431 mmu-miR-1958 56085 Ubqln1 ugAAUGAC--GAAGGUGAAAG-GAu |||:|| | :|:||||| || guUUAUUGAAAUGUCGCUUUCACUg 2 21 819 843 [mm9:13:58278394-58278418:-] 0.6627 123 0 -20.23 -0.2724 MIMAT0009433 mmu-miR-1960 56085 Ubqln1 ucgggagaagaUUGUCGUGACc |: ||||||| gugccgacuggAGGAGCACUGu 2 12 733 754 [mm9:13:58278483-58278504:-] 0.6627 143 7 -19.17 -0.2935 MIMAT0009434 mmu-miR-1961 56085 Ubqln1 aagauugaugAUGGAGu |||||| ucauaggcaaUACCUCg 2 8 916 932 [mm9:13:58278305-58278321:-] 0.7062 120 6 -11.09 -0.1076 MIMAT0009455 mmu-miR-1983 56085 Ubqln1 ucuuuuguacgaggUCCACUc |||||| ucaagggaaauagaAGGUGAa 2 8 1408 1428 [mm9:13:58277809-58277829:-] 0.7028 120 6 -14.42 -0.1651 MIMAT0009458 mmu-miR-1981 56085 Ubqln1 cggUGCAGAUUCGGGU---CGG-AAAUg || ||| ||| | ||| |||| uaaACAUCUCAGCAGAAGUGCCAUUUAg 2 22 585 612 [mm9:13:58278625-58278652:-] 0.5935 120 0 -11.48 -0.4343 MIMAT0009460 mmu-miR-1982.1 56085 Ubqln1 gacacccucuugUAUCCCACUcu || |||||| ucaccuuuucuaAUUGGGUGAac 3 12 253 275 [mm9:13:58278962-58278984:-] 0.7078 127 0 -10.69 -0.1501 MIMAT0009460 mmu-miR-1982.1 56085 Ubqln1 gacACCCUC-UUGU-AUCCCACUcu | | || : || | |||||| auaUAGUAGUGUCAUUUGGGUGAaa 3 21 1119 1143 [mm9:13:58278094-58278118:-] 0.6585 126 0 -12.86 -0.1182 MIMAT0011210 mmu-miR-2134 56085 Ubqln1 cguGGGGCAAAGGG-UUCUg |::| || ||| |||| uuuCUUCCUUCCCCAAAGAc 2 17 1192 1211 [mm9:13:58278026-58278045:-] 0.6634 120 0 -14.95 -0.5166 MIMAT0011222 mmu-miR-2146 56085 Ubqln1 guguaccuugggaAGAGGUg |||||| uuugauuuauuaaUCUCCAa 2 8 1671 1690 [mm9:13:58277547-58277566:-] 0.7028 120 6 -9.26 -0.3518 MIMAT0011222 mmu-miR-2146 56085 Ubqln1 guguaccuugggaAGAGGUg |||||| aaauaacaauaaaUCUCCAg 2 8 1689 1708 [mm9:13:58277529-58277548:-] 0.7028 120 6 -8.57 -0.2846 MIMAT0012771 mmu-miR-432 56085 Ubqln1 gacgggUGACUAGAU-GAGGUUcu |:| ||: | |||||| aguuugAUUUAUUAAUCUCCAAau 3 18 1669 1692 [mm9:13:58277545-58277568:-] 0.7028 132 0 -12.26 -0.1973 MIMAT0012774 mmu-miR-664 56085 Ubqln1 auccgacccCUCAUUUAC-UUAu ||| ||||| ||| cucuauccuGAGAAAAUGUAAUu 2 14 9 31 [mm9:13:58279206-58279228:-] 0.6916 121 0 -6.53 -1.2982 MIMAT0015640 mmu-miR-3470a 56085 Ubqln1 ggucggaccagAUGUUUCACu | :|||||| auguuaaauaaUCUAAAGUGa 2 11 1371 1391 [mm9:13:58277846-58277866:-] 0.7127 126 6 -9.96 -0.1665 MIMAT0015640 mmu-miR-3470a 56085 Ubqln1 ggucGGACCAGAUGUU-UCACu :|||| ||||| |||| gauuUCUGG--UACAAUAGUGc 2 18 385 404 [mm9:13:58278833-58278852:-] 0.7078 122 0 -14.96 -0.3940 MIMAT0015641 mmu-miR-3470b 56085 Ubqln1 ggucGGACCAGAUGUCUCACu :|||| :||||||| aguaUCUGG-AGGCAGAGUGc 2 18 118 137 [mm9:13:58279100-58279119:-] 0.6655 147 7 -21.28 -0.1038 MIMAT0015643 mmu-miR-3472 56085 Ubqln1 ccaagGAAGGUC--GAAGACCGAUAAu :||: || | |:|||||||| aacaaUUUUGAGUACGUUUGGCUAUUc 2 21 1156 1182 [mm9:13:58278055-58278081:-] 0.6334 159 7 -16.90 -0.8525 MIMAT0000121 mmu-let-7g 56085 Ubqln1 uugacaUGUUUGAUGAUGGAGu |:|::| | |||||| ucauucAUAGGC-AAUACCUCg 2 17 912 932 [mm9:13:58278305-58278325:-] 0.7062 122 6 -14.73 -0.1076 MIMAT0000122 mmu-let-7i 56085 Ubqln1 uugucGUGUUUGAUGAUGGAGu ||:|::| | |||||| ucauuCAUAGGC-AAUACCUCg 2 18 912 932 [mm9:13:58278305-58278325:-] 0.7062 127 6 -18.44 -0.1087 MIMAT0000123 mmu-miR-1 56085 Ubqln1 uauguaugaagaaAUGUAAGGu |||||||| acuguuggggugaUACAUUCCu 2 10 1234 1255 [mm9:13:58277982-58278003:-] 0.6905 145 7 -10.21 -0.6644 MIMAT0000125 mmu-miR-23b 56085 Ubqln1 ccaUUAGGGACCGU-UACACUa ::|| || || |||||| uagGGUCGGUGACAUAUGUGAc 2 19 1280 1301 [mm9:13:58277936-58277957:-] 0.7002 122 6 -11.17 -0.2131 MIMAT0000126 mmu-miR-27b 56085 Ubqln1 cgUCUUGAAUCGGUGA-CACUu | :|||| | :||| |||| ggAAGACUUUG-UACUGGUGAa 2 20 1616 1636 [mm9:13:58277601-58277621:-] 0.7028 121 0 -13.34 -0.7975 MIMAT0000127 mmu-miR-29b 56085 Ubqln1 uuGUGACUAAAGUUUAC-CACGAu ||| | | || :|| ||||| ggCACAGCCUGCAUGUGUGUGCUc 2 22 1564 1587 [mm9:13:58277650-58277673:-] 0.7028 125 0 -13.57 -0.2607 MIMAT0000133 mmu-miR-101a 56085 Ubqln1 aagucAAUAGUGU-CA-UGACAu ||||| :| || ||||| uucucUUAUCUUAGGUCACUGUa 2 17 1318 1340 [mm9:13:58277897-58277919:-] 0.7127 123 0 -15.16 -0.7999 MIMAT0004528 mmu-miR-125a-3p 56085 Ubqln1 ccGAGGGUUCUUGGAGUGGAca :|: || ||: |||||| uuUUUAAAAAAAUAUCACCUuu 3 21 239 260 [mm9:13:58278977-58278998:-] 0.6725 136 0 -11.90 -0.1283 MIMAT0000162 mmu-miR-152 56085 Ubqln1 ggUUCAAGACAGUACGU-GACu || ||:|||| |||| ||| caAAUUUUUGUCCUGCAUCUGu 2 20 275 296 [mm9:13:58278941-58278962:-] 0.7078 139 0 -15.94 -0.6290 MIMAT0000163 mmu-miR-153 56085 Ubqln1 cuagugAAAACACU-----GAUACGUu || ||||| ||||||| uuaagaUUCUGUGAAGAUUCUAUGCAu 2 17 1094 1120 [mm9:13:58278117-58278143:-] 0.6419 147 7 -13.06 -1.0563 MIMAT0000165 mmu-miR-155 56085 Ubqln1 uggggAUAGUGUUA---A-UCGUAAUu |:| ||||| | ||||||| cauaaUGUAACAAUAUCUCAGCAUUAu 2 19 680 706 [mm9:13:58278531-58278557:-] 0.6627 152 7 -10.39 -0.8731 MIMAT0000165 mmu-miR-155 56085 Ubqln1 uggGGAUA-GUGUUA--AUCGUAAUu ::||| :| ||| :|||||| uaaUUUAUGUAGAAUAAAGGCAUUAa 2 21 334 359 [mm9:13:58278878-58278903:-] 0.7078 134 6 -9.89 -0.2459 MIMAT0000210 mmu-miR-181a 56085 Ubqln1 ugaguggCUGUCGCAACUUACAa || | ||||||||| cuauuaaGAAAUAGUUGAAUGUc 2 17 981 1003 [mm9:13:58278234-58278256:-] 0.6657 156 7 -13.15 -0.3705 MIMAT0000212 mmu-miR-183 56085 Ubqln1 ucacuuaagauggUCACGGUAu |||||||| acaucucagcagaAGUGCCAUu 2 10 588 609 [mm9:13:58278628-58278649:-] 0.5935 145 7 -14.48 -0.6861 MIMAT0000219 mmu-miR-24 56085 Ubqln1 gacaaggacgacuugACUCGGu |||||| auuuuaaaugauuagUGAGCCa 2 8 933 954 [mm9:13:58278283-58278304:-] 0.7062 120 6 -14.39 -0.1515 MIMAT0000220 mmu-miR-190 56085 Ubqln1 uggaUUAUA-UAGUUUG-UAUAGu || || || ||| ||||| agacAACAUAAUGUAACAAUAUCu 2 19 674 697 [mm9:13:58278540-58278563:-] 0.6610 121 0 -8.31 -0.9020 MIMAT0000233 mmu-miR-200b 56085 Ubqln1 aguaguaaugguccGUCAUAAu ||||||| gacuggcucugguuCAGUAUUc 2 9 1299 1320 [mm9:13:58277917-58277938:-] 0.7127 140 7 -9.37 -0.8468 MIMAT0000235 mmu-miR-202-3p 56085 Ubqln1 agAAGGGUACG----CGAUAUGGAGa |||:||| | || ||||||| cuUUCUCAUUCAUAGGCAAUACCUCg 2 21 907 932 [mm9:13:58278305-58278330:-] 0.7062 159 7 -18.06 -0.9173 MIMAT0000237 mmu-miR-204 56085 Ubqln1 uccGUAUCCUACUGUUUCCCUu || || | |: |||||| agaCA-AGUAAAAUCAAGGGAa 2 20 1396 1416 [mm9:13:58277821-58277841:-] 0.7077 121 6 -12.17 -0.3825 MIMAT0000239 mmu-miR-206 56085 Ubqln1 ggugugugaaggaAUGUAAGGu |||||||| acuguuggggugaUACAUUCCu 2 10 1234 1255 [mm9:13:58277982-58278003:-] 0.6905 145 7 -10.13 -0.6644 MIMAT0000247 mmu-miR-143 56085 Ubqln1 cucgaUGUCACGAAGUA-GAGu :|| ||: |||| ||| gaggaGCACUGUAUCAUGCUCu 2 17 743 764 [mm9:13:58278473-58278494:-] 0.6627 120 0 -13.92 -0.2499 MIMAT0000373 mmu-miR-295 56085 Ubqln1 ucuGAGUUU--UCAUCA-UC-GUGAAa :|:||| | |||| || ||||| gauUUUAAAUGAUUAGUGAGCCACUUg 2 21 932 958 [mm9:13:58278279-58278305:-] 0.7062 126 0 -9.85 -0.8671 MIMAT0004576 mmu-miR-296-3p 56085 Ubqln1 ccucucGGAGGUGGGUUGGGAg ::| || :|||||| uugcuuUUUAAACAUAACCCUa 2 17 306 327 [mm9:13:58278910-58278931:-] 0.7078 132 6 -14.89 -0.2222 MIMAT0000383 mmu-let-7d 56085 Ubqln1 uugauacguuggaugAUGGAGa |||||| cucauucauaggcaaUACCUCg 2 8 911 932 [mm9:13:58278305-58278326:-] 0.7062 120 6 -10.26 -0.1087 MIMAT0000385 mmu-miR-106a 56085 Ubqln1 gauggAC-GUGACAAU-CGUGAAAc || | :|| | ||||||| uguugUGACUUUGGCAUGCACUUUg 2 19 406 430 [mm9:13:58278807-58278831:-] 0.7078 144 7 -16.22 -0.4416 MIMAT0000386 mmu-miR-106b 56085 Ubqln1 uagAC-GUGACAGU-CGUGAAAu || | :|| || ||||||| uugUGACUUUGGCAUGCACUUUg 2 19 408 430 [mm9:13:58278807-58278829:-] 0.7078 152 7 -15.32 -0.4416 MIMAT0000513 mmu-miR-19b 56085 Ubqln1 agucaaaacguaccuaAACGUGu |||||| uauacaauacaaauuaUUGCACa 2 8 477 499 [mm9:13:58278738-58278760:-] 0.6160 120 6 -9.12 -0.2191 MIMAT0000516 mmu-miR-148a 56085 Ubqln1 ugUUUCAAGACAUCACGU-GACu ||| ||:||| |||| ||| acAAAUUUUUGUCCUGCAUCUGu 2 21 274 296 [mm9:13:58278941-58278963:-] 0.7078 136 0 -17.18 -0.6290 MIMAT0000517 mmu-miR-192 56085 Ubqln1 ccGACAGUUAAGUAUCCAGUc || |:| || ||||||| uuCUCUUA--UCUUAGGUCAc 2 20 1318 1336 [mm9:13:58277901-58277919:-] 0.7127 152 7 -10.60 -0.8019 MIMAT0000521 mmu-let-7a 56085 Ubqln1 uugauauguuggaugAUGGAGu |||||| cucauucauaggcaaUACCUCg 2 8 911 932 [mm9:13:58278305-58278326:-] 0.7062 120 6 -13.42 -0.1087 MIMAT0000522 mmu-let-7b 56085 Ubqln1 uugguGUGUUGGAUGAUGGAGu ||:|: | | |||||| ucauuCAUAGGC-AAUACCUCg 2 18 912 932 [mm9:13:58278305-58278325:-] 0.7062 123 6 -16.86 -0.1087 MIMAT0000523 mmu-let-7c 56085 Ubqln1 uuGGUAUGU-UGGAUGAUGGAGu :||| || | | |||||| ucUCAUUCAUAGGCAAUACCUCg 2 21 910 932 [mm9:13:58278305-58278327:-] 0.7062 123 6 -15.73 -0.1087 MIMAT0000524 mmu-let-7e 56085 Ubqln1 uugauauguuggaggAUGGAGu |||||| cucauucauaggcaaUACCUCg 2 8 911 932 [mm9:13:58278305-58278326:-] 0.7062 120 6 -13.42 -0.1087 MIMAT0000525 mmu-let-7f 56085 Ubqln1 uugauauguuagaugAUGGAGu |||||| cucauucauaggcaaUACCUCg 2 8 911 932 [mm9:13:58278305-58278326:-] 0.7062 120 6 -12.35 -0.1087 MIMAT0000528 mmu-miR-18a 56085 Ubqln1 gauagacgugaucuacGUGGAAu |||||| auuuuuaaaaaaauauCACCUUu 2 8 238 260 [mm9:13:58278977-58278999:-] 0.6725 120 6 -9.40 -0.1560 MIMAT0000529 mmu-miR-20a 56085 Ubqln1 gaugGACG-UGAUA---UUCGUGAAAu :||: ||| | | ||||||| cuugUUGUGACUUUGGCAUGCACUUUg 2 20 404 430 [mm9:13:58278807-58278833:-] 0.7078 145 7 -14.65 -0.4448 MIMAT0000532 mmu-miR-23a 56085 Ubqln1 ccUUUAGGGACCGU-UACACUa :::|| || || |||||| uaGGGUCGGUGACAUAUGUGAc 2 20 1280 1301 [mm9:13:58277936-58277957:-] 0.7002 123 6 -11.61 -0.2131 MIMAT0000535 mmu-miR-29a 56085 Ubqln1 auUGGCUAAAGUCUAC-CACGAu || | | || :|| ||||| gcACAGCCUGCAUGUGUGUGCUc 2 21 1565 1587 [mm9:13:58277650-58277672:-] 0.7028 120 0 -12.70 -0.2607 MIMAT0000536 mmu-miR-29c 56085 Ubqln1 auUGGCUAAAGUUUAC-CACGAu || | | || :|| ||||| gcACAGCCUGCAUGUGUGUGCUc 2 21 1565 1587 [mm9:13:58277650-58277672:-] 0.7028 120 0 -12.70 -0.2607 MIMAT0000537 mmu-miR-27a 56085 Ubqln1 cgCCU--UGAAUCGGUGA-CACUu ||| |||| | :||| |||| uuGGAAGACUUUG-UACUGGUGAa 2 20 1614 1636 [mm9:13:58277601-58277623:-] 0.7028 120 0 -16.29 -0.7975 MIMAT0000540 mmu-miR-93 56085 Ubqln1 gauggAC-GUGCUUGU-CGUGAAAc || | : ::|| ||||||| uguugUGACUUUGGCAUGCACUUUg 2 19 406 430 [mm9:13:58278807-58278831:-] 0.7078 144 7 -17.08 -0.4481 MIMAT0000545 mmu-miR-98 56085 Ubqln1 uuguuauguugaaugAUGGAGu |||||| cucauucauaggcaaUACCUCg 2 8 911 932 [mm9:13:58278305-58278326:-] 0.7062 120 6 -11.90 -0.1087 MIMAT0000580 mmu-miR-148b 56085 Ubqln1 ugUUUCAAGACACUACGU-GACu ||| ||:||| |||| ||| acAAAUUUUUGUCCUGCAUCUGu 2 21 274 296 [mm9:13:58278941-58278963:-] 0.7078 136 0 -17.38 -0.6290 MIMAT0004651 mmu-miR-340-5p 56085 Ubqln1 uuAGUCAGAGUAACGA-AAUAUu | :| :|| |||| ||||| auUGGGAUUCUGUGCUGUUAUAa 2 21 80 102 [mm9:13:58279135-58279157:-] 0.7299 124 0 -9.85 -0.7888 MIMAT0004651 mmu-miR-340-5p 56085 Ubqln1 uuaGUC-AGAGUAACGAAAUAUu |:| |||:| ||||| | uaaCGGCUCUUAAAUCUUUAAAa 2 20 41 63 [mm9:13:58279174-58279196:-] 0.7299 122 0 -10.21 -0.1692 MIMAT0000649 mmu-miR-17 56085 Ubqln1 gaugGACG-UGA---CAUUCGUGAAAc :||: ||| | | ||||||| cuugUUGUGACUUUGGCAUGCACUUUg 2 20 404 430 [mm9:13:58278807-58278833:-] 0.7078 145 7 -16.99 -0.4416 MIMAT0000651 mmu-miR-19a 56085 Ubqln1 agucaaaacguaucuaAACGUGu |||||| uauacaauacaaauuaUUGCACa 2 8 477 499 [mm9:13:58278738-58278760:-] 0.6160 120 6 -9.12 -0.2191 MIMAT0000656 mmu-miR-139-5p 56085 Ubqln1 gaccucuGUGCACGUGACAUCu :| || |||||||| cuuaucuUAGGU-CACUGUAGu 2 16 1322 1342 [mm9:13:58277895-58277915:-] 0.7127 149 7 -14.97 -0.5644 MIMAT0000657 mmu-miR-200c 56085 Ubqln1 agguaguaauGGGCC--GUCAUAAu :|:|| ||||||| ugugacuggcUCUGGUUCAGUAUUc 2 14 1296 1320 [mm9:13:58277917-58277941:-] 0.7127 144 7 -12.75 -0.8468 MIMAT0000658 mmu-miR-210 56085 Ubqln1 agUCGGCGACAGUGUGCGU-GUc || :|: ||| :||||| || guAGGUGUCGUC-UACGCAGCAu 2 21 794 815 [mm9:13:58278422-58278443:-] 0.6627 122 0 -18.88 -0.5495 MIMAT0000666 mmu-miR-320 56085 Ubqln1 agcgggagaguuGGGUCGAAAa :|||||||| uaacaauaaaucUCCAGCUUUu 2 11 1692 1713 [mm9:13:58277524-58277545:-] 0.7028 146 7 -14.59 -0.9827 MIMAT0000666 mmu-miR-320 56085 Ubqln1 agcgggagaguugGGUCGAAAa :||||||| ucucuuggguuuaUCAGCUUUc 2 10 890 911 [mm9:13:58278326-58278347:-] 0.7062 141 7 -15.44 -0.8185 MIMAT0000668 mmu-miR-211 56085 Ubqln1 uccguUUCCUACUGUUUCCCUu ||| | |: |||||| cagacAAGUAAAAUCAAGGGAa 2 18 1395 1416 [mm9:13:58277821-58277842:-] 0.7077 125 6 -12.69 -0.3795 MIMAT0000669 mmu-miR-221 56085 Ubqln1 cuuuggGUCGUCUGUUACAUCga :||:| : |||||| cuauggUAGUAAUUUAUGUAGaa 3 18 325 347 [mm9:13:58278890-58278912:-] 0.7078 129 0 -11.12 -0.2764 MIMAT0000670 mmu-miR-222 56085 Ubqln1 uggGUCAUCGGU--CUACAUCga ::||||: | |||||| cuaUGGUAGUAAUUUAUGUAGaa 3 19 325 347 [mm9:13:58278890-58278912:-] 0.7078 129 0 -12.23 -0.2740 MIMAT0000671 mmu-miR-224 56085 Ubqln1 uugcCUUGGUGAUCACUGAAu | :|: | ||||||| aauaGUGCUUGUUGUGACUUu 2 18 397 417 [mm9:13:58278820-58278840:-] 0.7078 145 7 -11.07 -0.4305 MIMAT0000673 mmu-miR-181b 56085 Ubqln1 uggguggCUGUCGUUACUUACAa || | : ||||||| cuauuaaGAAAUAGUUGAAUGUc 2 17 981 1003 [mm9:13:58278234-58278256:-] 0.6657 144 7 -9.66 -0.3705 MIMAT0000673 mmu-miR-181b 56085 Ubqln1 uggGUGGCUGUCGUUAC-UUACAa ||::|| :| || ||||| cagCAUUGAGUUUAUUGAAAUGUc 2 21 810 833 [mm9:13:58278404-58278427:-] 0.6627 120 0 -10.68 -0.5829 MIMAT0000674 mmu-miR-181c 56085 Ubqln1 ugaguggcUGUCCAACUUACAa |:| ||||||||| auuaagaaAUA-GUUGAAUGUc 2 15 983 1003 [mm9:13:58278234-58278254:-] 0.6657 152 7 -11.75 -0.3734 MIMAT0000711 mmu-miR-365 56085 Ubqln1 uauuccuaaaaauccCCGUAAu |||||| augcaucaaacacuuGGCAUUu 2 8 210 231 [mm9:13:58279006-58279027:-] 0.6372 120 6 -6.73 -0.1177 MIMAT0000711 mmu-miR-365 56085 Ubqln1 uauuccuaaaaauccCCGUAAu |||||| uuuauguagaauaaaGGCAUUa 2 8 337 358 [mm9:13:58278879-58278900:-] 0.7078 120 6 -8.82 -0.2576 MIMAT0000741 mmu-miR-377 56085 Ubqln1 uguUUUCAACGGA--AACACA-CUa ||:| | ||| |||||| || aauAAGGAUUCCUAAUUGUGUAGAa 2 20 543 567 [mm9:13:58278670-58278694:-] 0.6217 126 0 -13.61 -1.0536 MIMAT0000746 mmu-miR-381 56085 Ubqln1 ugucucUCGAACGGGAACAUAu ||: | |:||||||| cacuguAGUCU-CUCUUGUAUg 2 17 1334 1354 [mm9:13:58277883-58277903:-] 0.7127 150 7 -13.61 -0.6425 MIMAT0000746 mmu-miR-381 56085 Ubqln1 ugucucUCGAACGG--GAACAUAu | :|||:: :|||||| cugacaAUUUUGUUUAUUUGUAUa 2 17 457 480 [mm9:13:58278757-58278780:-] 0.7078 131 6 -10.64 -0.1936 MIMAT0000766 mmu-miR-335-5p 56085 Ubqln1 ugUAAAAAGCAAUAACGAGAAcu |||||| | | |||||| uuAUUUUUGAUAACGGCUCUUaa 3 22 31 53 [mm9:13:58279184-58279206:-] 0.7299 145 0 -10.47 -0.2656 MIMAT0000904 mmu-miR-215 56085 Ubqln1 caGACAGUUUAGUAUCCAGUa :| || ||| ||||||| uaUUCUCUUAUCUUAGGUCAc 2 20 1316 1336 [mm9:13:58277901-58277921:-] 0.7127 159 7 -14.18 -0.7983 MIMAT0000904 mmu-miR-215 56085 Ubqln1 caGACA-GUUUAGUAUC-CAGUa || | || || :||| |||| uuCUAUGCAUAUAGUAGUGUCAu 2 20 1111 1133 [mm9:13:58278104-58278126:-] 0.6585 122 0 -11.76 -0.7581 MIMAT0004750 mmu-miR-425 56085 Ubqln1 aguugcccucACUAGCACAGUAa | :| ||||||| ucuaugcauaUAGUAGUGUCAUu 2 14 1112 1134 [mm9:13:58278103-58278125:-] 0.6585 145 7 -11.98 -0.9198 MIMAT0001533 mmu-miR-448 56085 Ubqln1 uaCCCUGUAGGAUGUAUACGUu || : || | ||||||| cuGGUGAAUGGCA-AUAUGCAg 2 21 1629 1649 [mm9:13:58277588-58277608:-] 0.7028 142 7 -13.25 -0.2888 MIMAT0001537 mmu-miR-429 56085 Ubqln1 ugccguaauggucuGUCAUAAu ||||||| gacuggcucugguuCAGUAUUc 2 9 1299 1320 [mm9:13:58277917-58277938:-] 0.7127 140 7 -16.29 -0.8468 MIMAT0001632 mmu-miR-451 56085 Ubqln1 uuGAGUCAUUACCAUUGCCAAa :|:| | || |||||| | aaUUUAUUUUUGAUAACGGCUc 2 21 28 49 [mm9:13:58279188-58279209:-] 0.6916 128 0 -11.30 -0.1209 MIMAT0003112 mmu-miR-489 56085 Ubqln1 cgACGGUAUAUACACCACAGUAa || |||||| || ||||||| uaUG-CAUAUA-GUAGUGUCAUu 2 22 1114 1134 [mm9:13:58278103-58278123:-] 0.6585 169 7 -18.61 -0.9099 MIMAT0003130 mmu-miR-486 56085 Ubqln1 gagCCCCGUCGAGU--CAUGUCcu ||| || :| | |||||| uuaGGGACAUUUAAUUGUACAGac 3 20 654 677 [mm9:13:58278560-58278583:-] 0.6594 134 0 -14.21 -0.1156 MIMAT0003168 mmu-miR-543 56085 Ubqln1 uucuucacguggcgcUUACAAa |||||| guugcccaaaauuauAAUGUUa 2 8 1355 1376 [mm9:13:58277861-58277882:-] 0.7127 120 6 -5.13 -0.4146 MIMAT0003182 mmu-miR-494 56085 Ubqln1 cuccaaaggGCACAUACAAAGu :| | ||||||| cacuggaagUGCGGAUGUUUCg 2 14 839 860 [mm9:13:58278377-58278398:-] 0.6627 145 7 -14.79 -0.1410 MIMAT0003182 mmu-miR-494 56085 Ubqln1 cuccaaagggcacaUACAAAGu ||||||| aacagugggaaucaAUGUUUCu 2 9 170 191 [mm9:13:58279046-58279067:-] 0.6192 140 7 -8.83 -0.5166 MIMAT0003187 mmu-miR-20b 56085 Ubqln1 gaugGACG-UGAUACU---CGUGAAAc :||: ||| ||: ||||||| cuugUUGUGACUUUGGCAUGCACUUUg 2 20 404 430 [mm9:13:58278807-58278833:-] 0.7078 149 7 -19.13 -0.4448 MIMAT0003727 mmu-miR-374 56085 Ubqln1 gugaaucguccaacaUAAUAUa |||||| guaugguugcccaaaAUUAUAa 2 8 1350 1371 [mm9:13:58277866-58277887:-] 0.7127 120 6 -7.18 -0.1564 MIMAT0003738 mmu-miR-496 56085 Ubqln1 cucuaaccgguacauUAUGAGu |||||| gaugcuguaagauuuAUACUCc 2 8 436 457 [mm9:13:58278780-58278801:-] 0.7078 120 6 -6.50 -0.1341 MIMAT0003450 mmu-miR-488 56085 Ubqln1 cugguuCUUUGUCG-GAAAGUu ||||:: | |||||| uuuauuGAAAUGUCGCUUUCAc 2 16 820 841 [mm9:13:58278396-58278417:-] 0.6627 123 6 -8.85 -0.3062 MIMAT0003456 mmu-miR-495 56085 Ubqln1 uuCUUCACGUGGUACAAA--CAAa |||||||: |||||| ||| ugGAAGUGCG-GAUGUUUCGGUUc 2 21 842 864 [mm9:13:58278373-58278395:-] 0.6627 122 0 -17.51 -0.7390 MIMAT0003456 mmu-miR-495 56085 Ubqln1 uucuucacgugguacAAACAAa |||||| uauacuccugacaauUUUGUUu 2 8 450 471 [mm9:13:58278766-58278787:-] 0.7078 120 6 -6.24 -0.1730 MIMAT0004324 mmu-miR-181d 56085 Ubqln1 ugGGUGGCU-GUUGUU-ACUUACAa |:|:: | ||:|: ||||||| uuCUAUUAAGAAAUAGUUGAAUGUc 2 22 979 1003 [mm9:13:58278234-58278258:-] 0.6657 151 7 -13.43 -0.3705 MIMAT0004324 mmu-miR-181d 56085 Ubqln1 uggGUGGCUGUUGUUAC-UUACAa ||::|| :| || ||||| cagCAUUGAGUUUAUUGAAAUGUc 2 21 810 833 [mm9:13:58278404-58278427:-] 0.6627 120 0 -11.22 -0.5829 MIMAT0004852 mmu-miR-190b 56085 Ubqln1 uuGGGUUAUAGUUUG-UAUAGu | :|||:| ||| ||||| aaCAUAAUGU--AACAAUAUCu 2 20 678 697 [mm9:13:58278540-58278559:-] 0.6627 120 0 -8.80 -0.9050 MIMAT0004858 mmu-miR-18b 56085 Ubqln1 gauugucgugaucuacGUGGAAu |||||| auuuuuaaaaaaauauCACCUUu 2 8 238 260 [mm9:13:58278977-58278999:-] 0.6725 120 6 -10.53 -0.1560 MIMAT0004896 mmu-miR-590-3p 56085 Ubqln1 ugAUCGA-AUAUG-UAU-UUUAAu || :| ||||| ||| ||||| uuUAUUUGUAUACAAUACAAAUUa 2 20 469 492 [mm9:13:58278745-58278768:-] 0.6160 129 0 -6.50 -1.1167 MIMAT0004896 mmu-miR-590-3p 56085 Ubqln1 ugaucGAA--UAUGUAUUUUAau ||| || : |||||| cggcuCUUAAAUCUUUAAAAUaa 3 17 44 66 [mm9:13:58279171-58279193:-] 0.7299 127 0 -2.95 -0.1773

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G043027 Ubqln1 Mus musculus 56085

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Ubqln1 mmu-miR-511 beg:338 end:357 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||.||| |||||||| &5' ----TGTAGAAT-AAAGGCAT 3' Ubqln1 mmu-miR-532-5p beg:338 end:357 pic:3' TGCCAGGATGTGAGTTCCGTAC 5'& . || | ||||||| &5' -----TGTAGAATAAAGGCAT- 3' Ubqln1 mmu-miR-16star beg:1075 end:1091 pic:3' AGTCGTCGTGTCAGTTATGACC 5'& .|| .|||||||| &5' ---------TAGGTAATACTGG 3' Ubqln1 mmu-miR-1 beg:1244 end:1255 pic:3' TATGTATGAAGAAATGTAAGGT 5'& |||||||| &5' -------------TACATTCC- 3' Ubqln1 mmu-miR-139-5p beg:1326 end:1342 pic:3' GACCTCTGTGCACGTGACATCT 5'& .| || |||||||| &5' -------TAGGT-CACTGTAG- 3' Ubqln1 mmu-miR-155 beg:687 end:706 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& | |||| | ||||||| &5' --CAATATCTC----AGCATTA- 3' Ubqln1 mmu-miR-667 beg:784 end:803 pic:3' GAACCCGACCCACCGTCCACAGT 5'& ||| |.||||||| &5' -----GCTCCCC-GTAGGTGTC- 3' Ubqln1 mmu-miR-202-3p beg:913 end:932 pic:3' AGAAGGGTACGCGATATGGAGA 5'& ..||| || ||||||| &5' ----TTCATAGGCAATACCTC- 3' Ubqln1 mmu-miR-741 beg:0 end:12 pic:3' AGATGTATCTTACCGTAGAGAGT 5'& ||||||||| &5' -------------GCATCTCTC- 3' Ubqln1 mmu-miR-883a-5p beg:572 end:599 pic:3' CATTGACGATGAAG--------AGAGTCGT 5'& || |||. |||||||| &5' ------GCATCTTTGATAAACATCTCAGCA 3' Ubqln1 mmu-miR-883a-5p beg:682 end:703 pic:3' CATTGACGATGAAG-AGAGTCGT 5'& ||. || |||||||| &5' -----TGTAACAATATCTCAGCA 3' Ubqln1 mmu-miR-3470b beg:119 end:137 pic:3' GGTCGGACCAGATGTCTCACT 5'& .|||| .||||||| &5' ----TCTGGAG-GCAGAGTG- 3' Ubqln1 mmu-miR-155 beg:1259 end:1283 pic:3' TGGGGATAGTGTTAA-TCGTAATT 5'& || .|.| ||| |||.|||. &5' ---CCAGTTAAAATACAGCGTTAG 3' Ubqln1 mmu-miR-1941-5p beg:1566 end:1592 pic:3' TTCGGAG--ACATGGTCGTAGAGGGA 5'& ||||| |||. || ||||.|| &5' -AGCCTGCATGTGTGTGC-TCTCTCT 3' Ubqln1 mmu-miR-320 beg:1701 end:1713 pic:3' AGCGGGAGAGTTGGGTCGAAAA 5'& .||||||||| &5' ------------TCCAGCTTTT 3' Ubqln1 mmu-miR-1941-5p beg:0 end:13 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& |||||||||.|| &5' ------------CAGCATCTCTCT 3' Ubqln1 mmu-miR-320 beg:883 end:911 pic:3' AGCGGGAGAGTTG------GGTCGAAAA 5'& ||. |||| .||||||| &5' --GCTGTCTCTTGGGTTTATCAGCTTT- 3' Ubqln1 mmu-miR-1941-5p beg:886 end:914 pic:3' TTCGGAG-AC----ATGGTCGTAGAGGGA 5'& |.||| || ||.|||| |.||.| &5' --GTCTCTTGGGTTTATCAGC-TTTCTC- 3' Ubqln1 mmu-miR-200c beg:1301 end:1320 pic:3' AGGTAGTAATG-GGCC--GTCATAAT 5'& .| |.|| ||||||| &5' ---------GCTCTGGTTCAGTATT- 3' Ubqln1 mmu-miR-707 beg:1536 end:1556 pic:3' GCATCCGTTCGCCGTACTGAC 5'& .|| . |||||||||| &5' ---GGGTGGA-GGCATGACTG 3' Ubqln1 mmu-miR-153 beg:1101 end:1120 pic:3' CTAGTGAAAACACT-----GATACGTT 5'& ||||| ||||||| &5' ---------TGTGAAGATTCTATGCA- 3' Ubqln1 mmu-miR-674star beg:881 end:891 pic:3' AACAAGACTCTACCCTCGACAC 5'& ||||||| &5' --------------GAGCTGT- 3' Ubqln1 mmu-miR-106b beg:416 end:430 pic:3' TAGACGTGACAGTCGTGAAAT 5'& |||. |||||||. &5' ----GCAT-----GCACTTTG 3' Ubqln1 mmu-miR-324-3p beg:1643 end:1661 pic:3' TCGTCGTGGACCCCGTCACC 5'& ||| |||||||||| &5' ----GCAGGTGGGGCAGTG- 3' Ubqln1 mmu-miR-1952 beg:1529 end:1547 pic:3' GTCTTCC--TCCCACCTCT 5'& |||| |||||||||. &5' ---AAGGTCAGGGTGGAGG 3' Ubqln1 mmu-miR-200bstar beg:430 end:449 pic:3' AGGTTACGACGGGTCATTCTAC 5'& |||| |||. ||||||| &5' ---AATGATGCT--GTAAGAT- 3' Ubqln1 mmu-miR-382star beg:1621 end:1639 pic:3' TTTTTCACAACA-GG-CACTTACT 5'& |||| |. |||||||. &5' --------TTGTACTGGTGAATGG 3' Ubqln1 mmu-miR-183 beg:590 end:608 pic:3' TCACTTAAGATGG--TCACGGTAT 5'& || .| |||||||| &5' -------TCAGCAGAAGTGCCAT- 3' Ubqln1 mmu-miR-425 beg:1124 end:1135 pic:3' AGTTGCCCTCACTAGCACAGTAA 5'& |||||||| &5' ---------------GTGTCATT 3' Ubqln1 mghv-miR-M1-2 beg:1020 end:1043 pic:3' TTTCTCC-CCCTCTCCCC-CAGAC 5'& ||.|.|| |||.|||||| | &5' AAGGGGGTGGGGGAGGGGTG---- 3' Ubqln1 mmu-let-7b beg:672 end:700 pic:3' TTGGTGTGTTGGATG---ATGGAGT 5'& .|| |||.||. || ||.|||| &5' GACAACATAATGTAACAATATCTCA 3' Ubqln1 mmu-let-7c beg:631 end:653 pic:3' TTGGTATGTTGGATGATGGAGT 5'& |||.| || |. .||.||| &5' AACTA-ACT-CTGGTTATCTC- 3' Ubqln1 mmu-let-7c-1star beg:653 end:676 pic:3' CCTTTCGATCTTCC--------AACATGTC 5'& |.|| |||||||| &5' ----------AGGGACATTTAATTGTACAG 3' Ubqln1 mmu-let-7c-2star beg:543 end:566 pic:3' CCTTTCTGTCATCTAACATATC 5'& ||.||. |||||.||| &5' --AAGGATTCCTAATTGTGTAG 3' Ubqln1 mmu-let-7fstar beg:1476 end:1495 pic:3' CCCTTCCGTTATCTAACATATC 5'& ||| ||| |||||| &5' -----GGCCCCAGACTGTATA- 3' Ubqln1 mmu-let-7fstar beg:545 end:566 pic:3' CCCTTCCGTTATC-TAACATATC 5'& |||| |||||.||| &5' ---AAGGATTCCTAATTGTGTAG 3' Ubqln1 mmu-let-7g beg:1578 end:1599 pic:3' TTGACATGTTTGATGATGGAGT 5'& |||.| || ||.|||.| &5' ---TGTGCTCTCT-CTGCCTTA 3' Ubqln1 mmu-let-7gstar beg:652 end:676 pic:3' CGTTCC-GTCACCGGACATGTCA 5'& .|.|| || .||||||| &5' -TAGGGACATTTAATTGTACAG- 3' Ubqln1 mmu-let-7i beg:477 end:497 pic:3' TTGTCGTGTTTGATGATGGAGT 5'& ||| .|||||.||.|.| &5' -ACAATACAAATTATTGC---- 3' Ubqln1 mmu-miR-103 beg:423 end:444 pic:3' AGTATCGGGACA--TGTTACGACGA 5'& |..|| | ||||||. &5' ------CTTTGCAAATGATGCTGT- 3' Ubqln1 mmu-miR-106a beg:410 end:431 pic:3' GATGGA--CGTGACAATCGTGAAAC 5'& ||. |||. |||||||| &5' --ACTTTGGCAT-----GCACTTTG 3' Ubqln1 mmu-miR-107 beg:423 end:444 pic:3' ACTATCGGGACA--TGTTACGACGA 5'& |..|| | ||||||. &5' ------CTTTGCAAATGATGCTGT- 3' Ubqln1 mmu-miR-1186 beg:682 end:705 pic:3' GTACGGAAAT-TAAGGTCGTGAG 5'& |||. || |||||.| &5' -ATGTAACAATATCTCAGCATT- 3' Ubqln1 mmu-miR-1195 beg:1466 end:1490 pic:3' ACT-CGTCCGACCGGAGCTTGAGT 5'& || |||||.||||| | ||| &5' -GAGGCAGGTTGGCCCCAGACT-- 3' Ubqln1 mmu-miR-1196 beg:1459 end:1481 pic:3' TCCG--TCTCCGTCCATCTAAA 5'& |||. |||||||||| |. &5' AGGTTGAGAGGCAGGTTGG--- 3' Ubqln1 mmu-miR-122 beg:1489 end:1511 pic:3' GTTTGTGGTAACAGTGTGAGGT 5'& |.||. || | |||||..| &5' ---ATACTTTTCTGACACTTTA 3' Ubqln1 mmu-miR-135a beg:493 end:512 pic:3' AGTGTATCCTTATTTTTCGGTAT 5'& ||||| |.||||| &5' -CACATTTCT-----AGGCCAT- 3' Ubqln1 mmu-miR-135b beg:493 end:512 pic:3' AGTGTATCCTTACTTTTCGGTAT 5'& ||||| |.||||| &5' -CACATTTCT-----AGGCCAT- 3' Ubqln1 mmu-miR-137 beg:911 end:928 pic:3' GATGCGCATAAGAATTCGTTATT 5'& |||| ||.|||||| &5' --------ATTCATAGGCAATA- 3' Ubqln1 mmu-miR-143 beg:63 end:81 pic:3' CTCGATGTCACGAAGTAGAGT 5'& ||| |||||.||.||| &5' -----ACA-TGCTTTATTTCA 3' Ubqln1 mmu-miR-145 beg:727 end:745 pic:3' TCCCTAAGGACC-CTTTTGACCTG 5'& |||| | | .|||||| &5' ------TCCTTGTGCCGACTGGA- 3' Ubqln1 mmu-miR-150 beg:1018 end:1037 pic:3' GTGACCATGTTCCCA-ACCCTCT 5'& | ||||| ||||.|| &5' -------AGAAGGGGGTGGGGGA 3' Ubqln1 mmu-miR-151-3p beg:1591 end:1611 pic:3' GGAGTTCCTCGGAGTCAGATC 5'& |||.| ||||||||||. &5' CCTTAC---GCCTCAGTCTG- 3' Ubqln1 mmu-miR-152 beg:801 end:819 pic:3' GGTTCAAGACA-GTACGTGACT 5'& ||| || |||.||| &5' ------TCTACGCA-GCATTGA 3' Ubqln1 mmu-miR-154 beg:1418 end:1440 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||||| | |||||.| &5' -GAAGGTGAATTCTATAACTT- 3' Ubqln1 mmu-miR-154 beg:1172 end:1191 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& ||| |. |||.||| &5' ----GGCTATTCT-ATAGCCT- 3' Ubqln1 mmu-miR-155 beg:799 end:819 pic:3' TGGGGATAGTGTTAATCGTAATT 5'& | .||| |.| ||||||.| &5' -CGTCTA-CGC----AGCATTGA 3' Ubqln1 mmu-miR-17star beg:1330 end:1343 pic:3' GATGTTCACGGGAGTGACGTCA 5'& ||||||.||| &5' ------------TCACTGTAGT 3' Ubqln1 mmu-miR-181a beg:985 end:1003 pic:3' TGAGTGGCTGTCGCAACTTACAA 5'& || ||||||||| &5' -------GAAATAGTTGAATGT- 3' Ubqln1 mmu-miR-181c beg:985 end:1003 pic:3' TGAGTGGCTGTC-CAACTTACAA 5'& || ||||||||| &5' -------GAAATAGTTGAATGT- 3' Ubqln1 mmu-miR-183 beg:1119 end:1134 pic:3' TCACTTAAGATGGTCACGGTAT 5'& || .||||.||| &5' ---------TAGTAGTGTCAT- 3' Ubqln1 mmu-miR-183 beg:857 end:876 pic:3' TCACTTAAGATGGTCACGGTAT 5'& ..||||| ||||||| &5' ----GGTTCTAAT--TGCCATA 3' Ubqln1 mmu-miR-183 beg:81 end:98 pic:3' TCACTTAAGATGGTCACGGTAT 5'& |.||||| ||||..| &5' ---GGATTCT----GTGCTGT- 3' Ubqln1 mmu-miR-1839-5p beg:1578 end:1598 pic:3' GTTCTGGACAAGATAGATGGAA 5'& . || ||| |||.|||| &5' -----TGTGCTCTCTCTGCCTT 3' Ubqln1 mmu-miR-185 beg:0 end:14 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || ||||||.| &5' ---------GCA--TCTCTCTA 3' Ubqln1 mmu-miR-185 beg:1184 end:1199 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& |||| |.|||.| &5' ---------GCCTCTTTCTTC- 3' Ubqln1 mmu-miR-188-5p beg:1030 end:1043 pic:3' GGGAGGTGGTACGTTCCCTAC 5'& | .||||.|| &5' -----------GGGAGGGGTG 3' Ubqln1 mmu-miR-1892 beg:1187 end:1209 pic:3' TAGGAGGGAGGGCAGGGGTTTA 5'& ||.|.|.|||. |||||||| &5' -TCTTTCTTCCT-TCCCCAAA- 3' Ubqln1 mmu-miR-1894-5p beg:1018 end:1040 pic:3' TCTCCGTCCACCATCCCCTCTC 5'& ||| .|| |||.||||||.| &5' AGAA--GGG-GGTGGGGGAGGG 3' Ubqln1 mmu-miR-18a beg:408 end:430 pic:3' GATAGACGT-GATC-TACGTGGAAT 5'& || .|.| ||||||.||. &5' -----TGACTTTGGCATGCACTTTG 3' Ubqln1 mmu-miR-18astar beg:1643 end:1660 pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& ||| |.||||||| &5' --------GCAGGTGGGGCAGT 3' Ubqln1 mmu-miR-1902 beg:0 end:11 pic:3' TTCAGTACGGATGACGTGGAGA 5'& |||.|||| &5' --------------GCATCTCT 3' Ubqln1 mmu-miR-1902 beg:416 end:430 pic:3' TTCAGTACGGATGACGTGGAGA 5'& || |||||.|. &5' -------GCA---TGCACTTT- 3' Ubqln1 mmu-miR-1902 beg:566 end:583 pic:3' TTCAGTACGGATGACGTGGAGA 5'& |.||| |||.||.| &5' --------CTTACAGCATCTTT 3' Ubqln1 mmu-miR-1906 beg:189 end:211 pic:3' TCGGGACGGAGTCCGACGACGT 5'& ..||| .| ||||||||||| &5' --TTCTGGTTAAGGCTGCTGCA 3' Ubqln1 mmu-miR-1906 beg:1590 end:1615 pic:3' TCGGGA--CGGAGTCCGACGACGT 5'& |||.| ||||||| |||. |. &5' -GCCTTACGCCTCAGTCTGTGGT- 3' Ubqln1 mmu-miR-1907 beg:994 end:1013 pic:3' TGGAGGTCTAGGAG-ACGACGAG 5'& || . || |||||.|| &5' -------GAATGTCGTGCTGTTC 3' Ubqln1 mmu-miR-192 beg:1323 end:1336 pic:3' CCGACAGTTAAGTATCCAGTC 5'& || ||||||| &5' ----------TCTTAGGTCA- 3' Ubqln1 mmu-miR-193 beg:965 end:981 pic:3' TGACCCTGAAACAT-CCGGTCAA 5'& ||| |||.|||| &5' ----------TGTTTGGCTAGTT 3' Ubqln1 mmu-miR-1931 beg:416 end:433 pic:3' CGGTAGCGTGGTCG-GGAACGTA 5'& |||. || |.||||| &5' ------GCAT--GCACTTTGCA- 3' Ubqln1 mmu-miR-1931 beg:1110 end:1134 pic:3' CGGTAGCGTG-GTCGGGAAC-GTA 5'& |.|| |||. .||. || ||| &5' -CTAT-GCATATAGTAG-TGTCAT 3' Ubqln1 mmu-miR-1933-5p beg:372 end:389 pic:3' TTTGATTCTGGCTTGTGGTACTGA 5'& || .| ||||||.| &5' ----------CGCGCCCCATGATT 3' Ubqln1 mmu-miR-193b beg:964 end:981 pic:3' TCGCCCTGAAACAC---CCGGTCAA 5'& ||| |||.|||| &5' -----------GTGTTTGGCTAGTT 3' Ubqln1 mmu-miR-194 beg:81 end:102 pic:3' AGGTGTACCTCA---ACGACAATGT 5'& ||| ||||||||.| &5' -------GGATTCTGTGCTGTTATA 3' Ubqln1 mmu-miR-1943 beg:1184 end:1202 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& |||. ||.|||.| &5' -------GCCTCTTTCTTCCTT- 3' Ubqln1 mmu-miR-1948 beg:1054 end:1077 pic:3' GACATGCTCACGAGACGGATTT 5'& ||| |. .| || | ||||.|| &5' CTGGATTGG-GC-CAGCCTGAA 3' Ubqln1 mmu-miR-1948 beg:1209 end:1227 pic:3' GACATGCTCACGAG----ACGGATTT 5'& |.|| ||||||| &5' ----------GTTCTACTTGCCTAA- 3' Ubqln1 mmu-miR-1952 beg:1017 end:1036 pic:3' GTCTTCCTCCCACCTCT 5'& ||||||| ||||||.|. &5' CAGAAGG-GGGTGGGGG 3' Ubqln1 mmu-miR-195 beg:991 end:1012 pic:3' CGGTTATAAAGACACGACGAT 5'& |. | || ||||||.| &5' GTTGAATG-TC-GTGCTGTT- 3' Ubqln1 mmu-miR-195 beg:84 end:100 pic:3' CGGTTATAAAGACACGACGAT 5'& ||||||||||.|| &5' --------TTCTGTGCTGTTA 3' Ubqln1 mmu-miR-1955 beg:765 end:782 pic:3' TTTTCGACGTCACGTAGGACCCTGA 5'& |||. | |||||.| &5' ----------GTGTTTGCTGGGGC- 3' Ubqln1 mmu-miR-1958 beg:710 end:732 pic:3' TGAATGACGA--AGGTGAAAGGAT 5'& .|||. |. ||||||| &5' ----GCTGTAAATTACCTTTCCT- 3' Ubqln1 mmu-miR-1960 beg:732 end:754 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& ||| || |. ||||||| &5' -GCCGACTGG-AGGAGCACTG- 3' Ubqln1 mmu-miR-1960 beg:797 end:818 pic:3' TCGGGAGAAGATTGTCGTGACC 5'& |.| ||| | .|||||.|| &5' -GTCGTCTAC--GCAGCATTG- 3' Ubqln1 mmu-miR-1961 beg:633 end:653 pic:3' AAGATTGAT---GATGGAGT 5'& |||||| .||.||| &5' --CTAACTCTGGTTATCTC- 3' Ubqln1 mmu-miR-1962 beg:1702 end:1713 pic:3' TACACAGGGTCACGGTCGGAGA 5'& |||||.|.| &5' -------------CCAGCTTTT 3' Ubqln1 mmu-miR-1962 beg:1171 end:1193 pic:3' TACACAGGGTCACGGTCGGAGA 5'& || |. .||||||| &5' ---TGGCTATTCTATAGCCTCT 3' Ubqln1 mmu-miR-196a beg:705 end:727 pic:3' GGGTTGTTGTAC-TTTGATGGAT 5'& .|| .| || |||.||||| &5' --TAATGGC-TGTAAATTACCT- 3' Ubqln1 mmu-miR-1971 beg:1701 end:1713 pic:3' AGAGTCGGGTCGGAAATG 5'& .|||||.|||| &5' ------TCCAGCTTTTA- 3' Ubqln1 mmu-miR-1982.2 beg:1026 end:1044 pic:3' GACACCCTCTTGTATCCCACT 5'& |||||.|| .|||||| &5' --GTGGGGGA----GGGGTGA 3' Ubqln1 mmu-miR-1983 beg:1631 end:1655 pic:3' TCTT-TTGTACGAGGTCCACTC 5'& ||| ..|| | ||||||.| &5' -GAATGGCAATATGCAGGTGGG 3' Ubqln1 mmu-miR-199a-5p beg:1071 end:1091 pic:3' CTTG-TCCATCAGACTTGTGACCC 5'& |||| ||||| |.||||| &5' GAACTAGGTA------ATACTGG- 3' Ubqln1 mmu-miR-199bstar beg:1071 end:1091 pic:3' CTTG-TCCATCAGATTTGTGACCC 5'& |||| ||||| |.||||| &5' GAACTAGGTA------ATACTGG- 3' Ubqln1 mmu-miR-19a beg:1607 end:1630 pic:3' AGTCAA-AACGTATCT-AAACGTGT 5'& || ||| | ||| ||||.|| &5' ---GTGGTTGGA-AGACTTTGTAC- 3' Ubqln1 mmu-miR-19astar beg:502 end:524 pic:3' CATCACGTT-GATACGTTTTGAT 5'& ||| || ||| ||||||.| &5' -TAG-GCCATCTAAGCAAAATT- 3' Ubqln1 mmu-miR-19b beg:1607 end:1630 pic:3' AGTCAAAACGT--ACCT----AAACGTGT 5'& ||. |||| ||||.|| &5' -------TGTGGTTGGAAGACTTTGTAC- 3' Ubqln1 mmu-miR-205 beg:1530 end:1547 pic:3' GTCTGAGGCCAC-CTTACTTCCT 5'& ||| |..||.||| &5' --------GGTCAGGGTGGAGG- 3' Ubqln1 mmu-miR-206 beg:1185 end:1218 pic:3' GGTGTGTGAAGGAA--------TGTAAGGT 5'& || | ||||||| ||.|||.| &5' CCTCTTTCTTCCTTCCCCAAAGACGTTCTA 3' Ubqln1 mmu-miR-207 beg:1021 end:1047 pic:3' CTCCCTC-CTCTCGGTCCTCTTCG 5'& ||||.| |.|.| .|| ||| | &5' -AGGGGGTGGGGGAGGGGTGAAAC 3' Ubqln1 mmu-miR-20a beg:1485 end:1511 pic:3' GATGGACG--TGATATT-C-GTGAAAT 5'& |||. ||| | ||||||| &5' ----CTGTATACTTTTCTGACACTTTA 3' Ubqln1 mmu-miR-20a beg:410 end:430 pic:3' GATGGA--CGTGATATTCGTGAAAT 5'& ||. |||. |||||||. &5' --ACTTTGGCAT-----GCACTTTG 3' Ubqln1 mmu-miR-20astar beg:123 end:141 pic:3' GAAATTCACGAGCATTACGTCA 5'& .|| || | |.|||||| &5' ----GAG-GCA-G-AGTGCAGT 3' Ubqln1 mmu-miR-20b beg:410 end:431 pic:3' GATGGA--CGTGATACTCGTGAAAC 5'& ||. |||. |||||||| &5' --ACTTTGGCAT-----GCACTTTG 3' Ubqln1 mmu-miR-20bstar beg:1324 end:1343 pic:3' GATCTTCACGAGT---GTGACGTCA 5'& ||.| |||||.||| &5' ---------CTTAGGTCACTGTAGT 3' Ubqln1 mmu-miR-210 beg:1512 end:1532 pic:3' AGTCGGCGACAGTGTGCGTGTC 5'& .| | |||.|.||| &5' --GGAAGAAA--ACATGTACA- 3' Ubqln1 mmu-miR-2140 beg:284 end:295 pic:3' TGGTGGTTCTAGACGTGGA 5'& |||||.|| &5' -----------CTGCATCT 3' Ubqln1 mmu-miR-215 beg:1318 end:1336 pic:3' CAGACAGTTTAGTATCCAGTA 5'& || ||| ||||||| &5' -----TCTTATCTTAGGTCA- 3' Ubqln1 mmu-miR-2183 beg:881 end:903 pic:3' TCCTC--CAGTC--CCCAAGTT 5'& ||| ||| |||||.| &5' --GAGCTGTCTCTTGGGTTTA- 3' Ubqln1 mmu-miR-21star beg:994 end:1012 pic:3' CTGTCGGGTAGCTGACGACAAC 5'& | ..||| ||||||| &5' ----GAATGTCG--TGCTGTT- 3' Ubqln1 mmu-miR-223 beg:1279 end:1306 pic:3' ACCCCATAAACTGT-----TTGACTGT 5'& |||| ||||| .||||.| &5' --GGGTCGGTGACATATGTGACTGGC- 3' Ubqln1 mmu-miR-224 beg:398 end:417 pic:3' TTGCCTTGGTGATCACTGAAT 5'& | .|. ||||||| &5' ----GTGCTTGTTGTGACTT- 3' Ubqln1 mmu-miR-24-2star beg:909 end:925 pic:3' TGACAAAGTCGAGTCATCCGTG 5'& ||| .||| |||||| &5' ------TCA-TTCA-TAGGCA- 3' Ubqln1 mmu-miR-25 beg:123 end:141 pic:3' AGTCTGGCTCTGT-TCACGTTAC 5'& |||.|| ||||||.| &5' -------GAGGCAGAGTGCAGT- 3' Ubqln1 mmu-miR-26a beg:1435 end:1455 pic:3' TCGGATAGGACC--TAATGAACTT 5'& |.||| .||.||||| &5' ------TTCTGTAAGTTGCTTGA- 3' Ubqln1 mmu-miR-26b beg:1435 end:1455 pic:3' TGGATAGGAC--TTAATGAACTT 5'& |.||| |.||.||||| &5' -----TTCTGTAAGTTGCTTGA- 3' Ubqln1 mmu-miR-27a beg:1086 end:1109 pic:3' CGCC-TTGAATCGGTGACACTT 5'& || ||.| || ||||||| &5' --GGCAATTAAGATTCTGTGAA 3' Ubqln1 mmu-miR-290-3p beg:209 end:232 pic:3' CCCGAATTTTGATCCGCCGTGAAA 5'& || |||| .||||.|| &5' --GCATCAAACACT-TGGCATTT- 3' Ubqln1 mmu-miR-291b-3p beg:409 end:430 pic:3' TGTTTGTTTTACC-TACGTGAAA 5'& .|| ||| ||||||||| &5' ---GACTT--TGGCATGCACTTT 3' Ubqln1 mmu-miR-295 beg:212 end:232 pic:3' TCTGAGTTTTCATCATCGTGAAA 5'& ||||| |.|||.|| &5' ----TCAAACACT-TGGCATTT- 3' Ubqln1 mmu-miR-301a beg:1607 end:1632 pic:3' CGA-AACTGTTATGATAACGTGAC 5'& |. |||. ||| |||.|||| &5' GTGGTTGGAAG-ACT-TTGTACTG 3' Ubqln1 mmu-miR-301b beg:1607 end:1632 pic:3' CGA-AACTGTTATGGTAACGTGAC 5'& |. |||. ||. |||.|||| &5' GTGGTTGGAAG-ACT-TTGTACTG 3' Ubqln1 mmu-miR-302a beg:214 end:233 pic:3' AGTGGTTTTGTACCTTCGTGAAT 5'& ||||| .|||.||| &5' ------AAACACTT-GGCATTTA 3' Ubqln1 mmu-miR-302b beg:208 end:233 pic:3' GATGAT-TTTGTACCTTCGTGAAT 5'& |.| ||||| .|||.||| &5' -TGCATCAAACACTT-GGCATTTA 3' Ubqln1 mmu-miR-302c beg:733 end:753 pic:3' GG-TGACTTTGTACCTTCGTGAA 5'& || ||||.| |.|||||| &5' CCGACTGGA-----GGAGCACT- 3' Ubqln1 mmu-miR-302d beg:207 end:233 pic:3' TGTG-AGTTTGTACCTTCGTGAAT 5'& |..| ||||||| .|||.||| &5' ATGCATCAAACACTT-GGCATTTA 3' Ubqln1 mmu-miR-3099 beg:1178 end:1201 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||. .|.|||||.||| ||| &5' TCTATAGCCTCTTTCTT-CCT- 3' Ubqln1 mmu-miR-30astar beg:827 end:848 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& ||. .| |.| ||||.||| &5' --TGTC-GCTTTC-ACTGGAAG 3' Ubqln1 mmu-miR-30astar beg:733 end:745 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& |||||||.|.| &5' -----------CCGACTGGAGG 3' Ubqln1 mmu-miR-30astar beg:1537 end:1559 pic:3' CGACGTTTGTAGGCTGACTTTC 5'& | || |..||| ||||||.. &5' GGTGGAGGCAT--GACTGAGG- 3' Ubqln1 mmu-miR-30bstar beg:681 end:701 pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& |.|| |||| |.|||.||| &5' -ATGT-AACA---ATATCTCAG 3' Ubqln1 mmu-miR-30estar beg:821 end:848 pic:3' CGACATTTGTAG-GC---TGACTTTC 5'& .|| |||..|| | ||||.||| &5' -TTG-AAATGTCGCTTTCACTGGAAG 3' Ubqln1 mmu-miR-30estar beg:728 end:745 pic:3' CGACATTTGTAGGCTGACTTTC 5'& .|||. |||||||.|.| &5' -TTGTG-----CCGACTGGAGG 3' Ubqln1 mmu-miR-31star beg:1633 end:1658 pic:3' CTACCGTTATACAACCGTATCGT 5'& ||||||||||| ||.. .||| &5' -ATGGCAATATGCAGGTGGGGCA 3' Ubqln1 mmu-miR-32 beg:126 end:142 pic:3' ACGTTGAATCATTACACGTTAT 5'& |||. |||||.|| &5' -GCAGA--------GTGCAGTA 3' Ubqln1 mmu-miR-33 beg:126 end:150 pic:3' ACGT--TACGTTGATGTTACGTG 5'& ||| .||||. |||.| | .| &5' -GCAGAGTGCAG-TACGACGGGC 3' Ubqln1 mmu-miR-345-3p beg:1298 end:1316 pic:3' CAGAGGTCTGGGGATCAAGTCC 5'& | | |.||.|||||| &5' ----CTGG--CTCTGGTTCAG- 3' Ubqln1 mmu-miR-3472 beg:79 end:100 pic:3' CCAAGGAAGGTCGAAGAC-CGATAAT 5'& |. .| ||||| |||.||| &5' -------TTGGGATTCTGTGCTGTTA 3' Ubqln1 mmu-miR-3473 beg:0 end:14 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||||||||.| &5' -----AG-CATCTCTCTA 3' Ubqln1 mmu-miR-3475 beg:1690 end:1709 pic:3' AAGTTTGGTACACGGAGGTCT 5'& ||| .|||||| &5' ----AACAATAAATCTCCAG- 3' Ubqln1 mmu-miR-361 beg:375 end:395 pic:3' CATGGGGACCTCT-AAGACTATT 5'& .|||| || |||||.|| &5' --GCCCCAT--GATTTCTGGTA- 3' Ubqln1 mmu-miR-367 beg:126 end:141 pic:3' AGTGGTAACGATTTCACGTTAA 5'& || |.||||||.| &5' --------GC-AGAGTGCAGT- 3' Ubqln1 mmu-miR-374star beg:670 end:691 pic:3' GAGCCTGTTACTATTATGTTGG 5'& | ||||| |||||..||| &5' --CAGACAAC-ATAATGTAAC- 3' Ubqln1 mmu-miR-376c beg:599 end:620 pic:3' TGCACTTTAAAGGAGATACAA 5'& ||| |||| |||.||| &5' --GTGCCATTTAGTCTGTGT- 3' Ubqln1 mmu-miR-377 beg:600 end:622 pic:3' TGTTTTCAACGG-AA-----ACACACTA 5'& |||| || ||||||. &5' --------TGCCATTTAGTCTGTGTGG- 3' Ubqln1 mmu-miR-382 beg:1423 end:1441 pic:3' GCTTAGGTGGTGCTTGTTGAAG 5'& ||||.| |.|||||| &5' -GAATTCT------ATAACTTC 3' Ubqln1 mmu-miR-384-5p beg:756 end:776 pic:3' TGTAACGGATCCTTAACAAATGT 5'& |||. || |||||.| &5' ----TGCTCT-GATGTGTTTGC- 3' Ubqln1 mmu-miR-412 beg:1408 end:1429 pic:3' GCCGATCACCTGG----TCCACTT 5'& || ||| ||||||| &5' -----AG-GGAAATAGAAGGTGAA 3' Ubqln1 mmu-miR-412 beg:1024 end:1045 pic:3' GCCGATCACCTGGTCCACTT 5'& || |.| ||. .|||||| &5' -GGGTGG-GGGAGGGGTGAA 3' Ubqln1 mmu-miR-421 beg:1219 end:1241 pic:3' CGCGGGTTAATTACA-GACAACTA 5'& |||.|| ||||||. &5' --GCCTAACTCTCAAACTGTTGG- 3' Ubqln1 mmu-miR-429 beg:1300 end:1320 pic:3' TGCCGTAATGGTCT-GTCATAAT 5'& ||| | | ||||||| &5' --GGCT---CTGGTTCAGTATT- 3' Ubqln1 mmu-miR-431star beg:1613 end:1639 pic:3' TCTTC-GGGACGTT-CTGCTGGAC 5'& .|||| |..||.| | || || &5' GGAAGACTTTGTACTGGTGAA-TG 3' Ubqln1 mmu-miR-434-3p beg:990 end:1016 pic:3' TCCTCAGCT--CACTAC--CAAGTTT 5'& |||.|| || .|| ||||..| &5' ---AGTTGAATGTCGTGCTGTTCGGA 3' Ubqln1 mmu-miR-434-3p beg:1384 end:1399 pic:3' TCCTCAGCTCACTACCAAGTTT 5'& ||||| |||||.| &5' --------AGTGA--GTTCAGA 3' Ubqln1 mmu-miR-450a-3p beg:1692 end:1709 pic:3' TACTTACGTTTCGTAGGGGTTA 5'& ||| |||.|||. &5' -------CAATAAATCTCCAG- 3' Ubqln1 mmu-miR-452 beg:412 end:436 pic:3' CAGAGTCAAA-G-GAGACGTTTGT 5'& .| | | ||.||||||. &5' --TTTGGCATGCACTTTGCAAAT- 3' Ubqln1 mmu-miR-455 beg:1574 end:1595 pic:3' CACATATACGGGCACCTGACG 5'& |||.|.|||.| |||| &5' -TGTGTGTGCTCTCT--CTGC 3' Ubqln1 mmu-miR-466f-5p beg:201 end:223 pic:3' GTACG-TGTACGT-GTGTGTGCAT 5'& ||| .|||||| || |||| &5' --TGCTGCATGCATCAAACAC--- 3' Ubqln1 mmu-miR-466g beg:600 end:620 pic:3' ACACACACGTACA--CAGACATA 5'& |||| ||||||.| &5' -----GTGCCATTTAGTCTGTGT 3' Ubqln1 mmu-miR-469 beg:1529 end:1550 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& |||.|||. |. .|||||| &5' -------AAGGTCAG-GGTGGAGGCA 3' Ubqln1 mmu-miR-469 beg:1458 end:1475 pic:3' CCTGTGGTTCTAGTTACTTTCTCCGT 5'& |||.|. .||||||| &5' -------AAGGTT-----GAGAGGCA 3' Ubqln1 mmu-miR-470star beg:1613 end:1634 pic:3' AGAAGAGTCTTTC-----CATGACCAA 5'& |.||| |||||||| &5' --------GGAAGACTTTGTACTGGT- 3' Ubqln1 mmu-miR-483star beg:1020 end:1044 pic:3' TTCTGCCCTCCCCTCCTCACT 5'& |||. || |||||||.|||| &5' AAGGGGGTGGGGGAGGGGTGA 3' Ubqln1 mmu-miR-484 beg:1056 end:1076 pic:3' TAGCCCTCCCCTGACTCGGACT 5'& ||| ||.| ||||||| &5' ----GGATTGGGCC-AGCCTGA 3' Ubqln1 mmu-miR-485 beg:1698 end:1713 pic:3' CTTAAGTAGTGCCGGTCGGAGA 5'& ||| |||||.|.| &5' ------ATCT---CCAGCTTTT 3' Ubqln1 mmu-miR-486 beg:1648 end:1671 pic:3' GAGCCCCGTCG-AGTCA-TGTCCT 5'& .|||||||. ||| .||| &5' --TGGGGCAGTGTCAAAAGCAG-- 3' Ubqln1 mmu-miR-488 beg:294 end:317 pic:3' CTGGTTCTTTGT-CGGAAAGTT 5'& |||| ||| ||.|||.|| &5' --CCAACTAACTTGCTTTTTAA 3' Ubqln1 mmu-miR-489 beg:1113 end:1135 pic:3' CGACGGTATATACACCACAGTAA 5'& || |||||| || |||||||| &5' --TG-CATATA-GTAGTGTCATT 3' Ubqln1 mmu-miR-497 beg:83 end:99 pic:3' ATGTTTGGTGTCACACGACGAC 5'& |. |||||||.| &5' --------ATTCTGTGCTGTT- 3' Ubqln1 mmu-miR-539 beg:173 end:194 pic:3' TGTGTGGTTCCTAT----TAAAGAGG 5'& .||| .|||||.| &5' --------GGGAATCAATGTTTCTTC 3' Ubqln1 mmu-miR-582-5p beg:1472 end:1493 pic:3' TCATTGACCAACTTG---TTGACAT 5'& ||||| | .|||||| &5' -------GGTTGGCCCCAGACTGTA 3' Ubqln1 mmu-miR-652 beg:1114 end:1135 pic:3' GTGTTGGGATCACCGCGGTAA 5'& .|| |||| |.|.|||| &5' -GCATA--TAGTAGTGTCATT 3' Ubqln1 mmu-miR-652 beg:591 end:610 pic:3' GTGTTGGGATCACCGCGGTAA 5'& ||.| || |.|||||| &5' --CAGC---AGAAGTGCCATT 3' Ubqln1 mmu-miR-669g beg:666 end:689 pic:3' TAGTACAG--TTGTGTATGTTACGT 5'& ||| .||| |.||||.| &5' ----TGTACAGACAAC-ATAATGTA 3' Ubqln1 mmu-miR-673-3p beg:1005 end:1028 pic:3' CCACGTGTCTT-GAGTCGGGGCCT 5'& ||. |.||. ||||| ||. &5' --TGTTCGGAGCCTCAGAA--GGG 3' Ubqln1 mmu-miR-673-5p beg:397 end:414 pic:3' GAGGTTCCTGGTCTCGACACTC 5'& || |. |.||||| &5' -----AGTGCTT--GTTGTGA- 3' Ubqln1 mmu-miR-676 beg:1006 end:1028 pic:3' TCGAGTTGTTGGAGTCCTGCC 5'& |.||.. |.|||||| | || &5' -GTTCGG-AGCCTCAGAAGGG 3' Ubqln1 mmu-miR-677 beg:831 end:846 pic:3' AGTCTTCGATTAGTAGTGACTT 5'& ||| ||||||.| &5' ------GCTT----TCACTGGA 3' Ubqln1 mmu-miR-684 beg:1603 end:1624 pic:3' AACTGA-ACTTCCCTTTTGA 5'& | || ||. ||||.||| &5' --GTCTGTGGTTGGAAGACT 3' Ubqln1 mmu-miR-686 beg:119 end:133 pic:3' AGAAGTGGCAGACCCTTCGTTA 5'& ||| |||.|||. &5' ---------TCT-GGAGGCAG- 3' Ubqln1 mmu-miR-693-3p beg:867 end:891 pic:3' AATGTCGGTGTAGA--C-TTTCGACG 5'& ||||.|| | |.|||||. &5' -----GCCATATAAAAGTAGAGCTGT 3' Ubqln1 mmu-miR-693-5p beg:1603 end:1617 pic:3' CTTTTGAAAGCCTACACCGAC 5'& | |||||.|| &5' ----------GTCTGTGGTTG 3' Ubqln1 mmu-miR-698 beg:1029 end:1052 pic:3' TCCCTTCCT---TTGCTCTTAC 5'& .||||.||. ||| ||||| &5' GGGGAGGGGTGAAAC-AGAAT- 3' Ubqln1 mmu-miR-702 beg:1026 end:1043 pic:3' CTCGCCCCATTTCCCACCCGT 5'& |.|.|||| .|.||||| &5' GGGTGGGG-GAGGGGTG---- 3' Ubqln1 mmu-miR-706 beg:945 end:965 pic:3' AAAAAACTCTGTCC-CAAAGAGA 5'& |||| || ||||||| &5' -----TGAGCCACTTGTTTCTC- 3' Ubqln1 mmu-miR-706 beg:172 end:193 pic:3' AAAAAACTCT--GTCCCAAAGAGA 5'& ||.|| || ||||||. &5' -----TGGGAATCAATGTTTCTT- 3' Ubqln1 mmu-miR-709 beg:1583 end:1605 pic:3' AGGAG-GACGGAGA-CGGAGG 5'& .||| ||||||. ||||| &5' -TCTCTCTGCCTTACGCCTC- 3' Ubqln1 mmu-miR-709 beg:1185 end:1204 pic:3' AGGAGGACGGAGACGGAGG 5'& ||||.| |.|| |.||| &5' -CCTCTTTCTTC--CTTCC 3' Ubqln1 mmu-miR-741 beg:1328 end:1348 pic:3' AGATGTATCTT---ACCGTAGAGAGT 5'& |||. || .|||||| &5' ------TAGGTCACTGTAGTCTCTC- 3' Ubqln1 mmu-miR-741 beg:1570 end:1592 pic:3' AGATGTATCTTAC-CGTAGAGAGT 5'& ||.|||. .|| || |||||| &5' -CTGCATGT-GTGTGC-TCTCTC- 3' Ubqln1 mmu-miR-741 beg:633 end:655 pic:3' AGATGTATCTTACC-GTAGAGAGT 5'& ||| ||| .||||||. &5' -CTAACTC---TGGTTATCTCTT- 3' Ubqln1 mmu-miR-743a beg:145 end:167 pic:3' AGATGAGTCGAAC-CACAGAAAG 5'& .| .|.|| ||||||||. &5' ---GCG-GGTTTCTGTGTCTTTT 3' Ubqln1 mmu-miR-744star beg:1628 end:1645 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| ||||||.| &5' -------GGTGAATGGCAATA- 3' Ubqln1 mmu-miR-744star beg:918 end:928 pic:3' TCCAACTCCAATCACCGTTGTC 5'& |||||.| &5' --------------GGCAATA- 3' Ubqln1 mmu-miR-758 beg:1646 end:1664 pic:3' ATCACCTGGTC-CAGTGTTT 5'& .||||. ||| |||| &5' -GGTGGGGCAGTGTCA---- 3' Ubqln1 mmu-miR-878-5p beg:1062 end:1084 pic:3' ACAGAACTGTA-GG--TTGATCTAT 5'& |.| || ||||||.|| &5' ------GGCCAGCCTGAACTAGGTA 3' Ubqln1 mmu-miR-879 beg:1001 end:1021 pic:3' CCGAATCTCGATA---TTCGGAGA 5'& | |||.| .|||||| &5' ------GTGCTGTTCGGAGCCTC- 3' Ubqln1 mmu-miR-881star beg:1329 end:1349 pic:3' TCTACACTGACAATAGAGAGAC 5'& || ||||| .||||||| &5' ----GTCACTGTAGTCTCTCT- 3' Ubqln1 mmu-miR-881star beg:1573 end:1594 pic:3' TCTACACTGACAATAGAGAGAC 5'& ||||| ||| |||||||| &5' --ATGTG--TGTGCTCTCTCTG 3' Ubqln1 mmu-miR-881star beg:2 end:13 pic:3' TCTACACTGACAATAGAGAGAC 5'& |||||||| &5' -------------ATCTCTCT- 3' Ubqln1 mmu-miR-881star beg:149 end:169 pic:3' TCTACACTGACAATAGAGAGAC 5'& || ||| |.|||.|.|| &5' ----GTTTCTG-TGTCTTTTTG 3' Ubqln1 mmu-miR-882 beg:1329 end:1350 pic:3' TGATTAC-GCGAT-TGAGAGAGGA 5'& | | ||. | ||||||.| &5' ------GTCACTGTAGTCTCTCTT 3' Ubqln1 mmu-miR-883b-5p beg:1296 end:1318 pic:3' ACTGACGATGGGTAAGAGTCAT 5'& |||||| .|.| .|||||| &5' TGACTG--GCTCTGGTTCAGTA 3' Ubqln1 mmu-miR-92a beg:120 end:142 pic:3' GTCCGGCC-CTGT-TCACGTTAT 5'& |.|| |.|| ||||||.|| &5' ----CTGGAGGCAGAGTGCAGTA 3' Ubqln1 mmu-miR-92b beg:122 end:142 pic:3' CCTCCGGCCCTGCTCACGTTAT 5'& |||||| |||||||.|| &5' GGAGGCA-----GAGTGCAGTA 3' Ubqln1 mmu-miR-93 beg:410 end:431 pic:3' GATGGA--CGTGCTTGTCGTGAAAC 5'& ||. |||. |||||||| &5' --ACTTTGGCAT-----GCACTTTG 3' Ubqln1 mmu-miR-93star beg:589 end:600 pic:3' GCCCTTCACGATCGAGTCGTCA 5'& |||||||| &5' -------------CTCAGCAG- 3' Ubqln1 mmu-miR-98 beg:681 end:700 pic:3' TTGTTATGTTGAATGATGGAGT 5'& .|||..||| ||.|||| &5' --TAATGTAACAA--TATCTCA 3'

DNA & RNA Element - miRNAMap Gene Name Mature miRNA Target Start Target End miRNA 3-5 Alignment Target 5-3 Ubqln1; Plic1 mmu-let-7f 1580 1600 UGAUAUGUUAGAUGAUGGAGU- |:|:| ||| ||:|||:| -GUGUGCUCUCU-CUGCCUUAC Ubqln1; Plic1 mmu-miR-101a 1310 1342 GAAGUCA-------AUAGUG-UCA-UGACAU- |||||| |||| :|| |||||| GUUCAGUAUUCUCUUAUCUUAGGUCACUGUAG Ubqln1; Plic1 mmu-miR-101b 1310 1342 GAAGUCG-------AUAGUG-UCA-UGACAU- |||||: |||| :|| |||||| GUUCAGUAUUCUCUUAUCUUAGGUCACUGUAG Ubqln1; Plic1 mmu-miR-103 755 778 -AGUAUCGGGACAUGUUAC-GACGA- |||| ||:||| :|| :|||| AUCAU-GCUCUGAU--GUGUUUGCUG Ubqln1; Plic1 mmu-miR-106a 401 432 -AUGGACGUGACAAU-------CGUGAAAC- |:|:||: || |||||||| GUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-107 742 766 ACUA-UCGGGACAUGUUACGACGA- || ||| |||||: ||||| || GGAGGAGCACUGUAUCAUGCU-CUG Ubqln1; Plic1 mmu-miR-132 1470 1493 GCUGGU--ACCGACAUCUGACAAU |:| |||| ||||||| AGGCAGGUUGGCCCCAGACUGUA- Ubqln1; Plic1 mmu-miR-133a 1233 1267 -UGUCGACCA-ACUUC---------CCCUGGUU- || |:||| ||| |||||||: AACUGUUGGGGUGAUACAUUCCUUUGGGACCAGU Ubqln1; Plic1 mmu-miR-134 1251 1270 GGGGAGACCAGUUGGUCAGUGU :|||:||| :||||||:| UUCCUUUGG--GACCAGUUAA- Ubqln1; Plic1 mmu-miR-135a 1129 1154 -AGUGUAUCCUUA-UUUUUCGGUAU |||: |:|| |||:||||:| GUCAUUUGGGUGAAAAAGAGCCGUU Ubqln1; Plic1 mmu-miR-135b 1117 1154 -GUGUAUC-----------CUUACUU---UUCGGUAU ||:|||| | |||| :||||:| GCAUAUAGUAGUGUCAUUUGGGUGAAAAAGAGCCGUU Ubqln1; Plic1 mmu-miR-140* 1606 1636 -AGGCACCAAGA---UGGGACA---CCAU- ||:|||||| ||::||| |||: GUCUGUGGUUGGAAGACUUUGUACUGGUGA Ubqln1; Plic1 mmu-miR-149 1036 1077 -CCUCACU---------------UCUGUGCC--UCGGUCU ||:|||| :||: || |||| || AGGGGUGAAACAGAAUCUAUUCUGGAUUGGGCCAGCCUGAA Ubqln1; Plic1 mmu-miR-150 1012 1038 GUGACCAUG-----UUCCCA-ACCCUCU- || :| ||||| ||||:|| ---CGGAGCCUCAGAAGGGGGUGGGGGAG Ubqln1; Plic1 mmu-miR-151 1593 1612 -GGAGUUCCUCGGAGUCAGAUC |||:| ||||||||||: GCCUUAC---GCCUCAGUCUGU Ubqln1; Plic1 mmu-miR-15b 751 779 -ACAUU---UGGUACUACAC-GACGAU- |||| :|: ||||||| :||||: CUGUAUCAUGCUCUGAUGUGUUUGCUGG Ubqln1; Plic1 mmu-miR-16 973 1013 GCGGUUA--------------UAAAU----GCACGACGAU ||:|:| :|| |||||||:| GGCUAGUUCUAUUAAGAAAUAGUUGAAUGUCGUGCUGUUC Ubqln1; Plic1 mmu-miR-17-5p 719 754 -UGAUGG--------ACG--UGACA--UUCGUGAAAC |:|||| ||| |||| :|||||| AAUUACCUUUCCUUGUGCCGACUGGAGGAGCACUG-- Ubqln1; Plic1 mmu-miR-18 426 445 AUAGACGUGAUCUACGUGGAAU |:|||| ||||| : -CUUUGCAAAUGAUGCUGUA-- Ubqln1; Plic1 mmu-miR-182 846 875 ACAC----------UCAAGAUGGUAACGGUUU ||| :|||||| ||||||| AGUGCGGAUGUUUCGGUUCUA--AUUGCCAU- Ubqln1; Plic1 mmu-miR-183 1103 1135 GUCACU--UAAGAUG--------GUCACGGUAU |||| ||||||: :||||:||| -UGUGAAGAUUCUAUGCAUAUAGUAGUGUCAUU Ubqln1; Plic1 mmu-miR-184 277 301 -UGGGAAUAGUCAAGAGGCAGGU- |: ||:|| ||:||||| AAUUUUUGUCCUGCAUCUGUCCAA Ubqln1; Plic1 mmu-miR-185 1334 1350 CUUGACGGAAAGAGAGGU ||||: ||||||: -CACUGUAG-UCUCUCUU Ubqln1; Plic1 mmu-miR-191 68 94 UCGACGAA-------AACCCUAAGGCAAC ||||| |||||||||:|| --AUGCUUUAUUUCAUUGGGAUUCUGUG- Ubqln1; Plic1 mmu-miR-192 1534 1567 ACAGUUAA------GUA--------UCCAGUC- ||||: ||| |||||:| GGUCAGGGUGGAGGCAUGACUGAGGAGGUCGGC Ubqln1; Plic1 mmu-miR-193 1511 1541 -GACCCUGAA-----ACA----UCCGGUCAA |||||| ||| |||:||| CCUGGGAAGAAAACAUGUACAAAGGUCAGG- Ubqln1; Plic1 mmu-miR-194 76 103 -AGGUGUACCUCA---ACGACAAUGU- |:||: ||| ||||||||:| UUUCAUUGGGAUUCUGUGCUGUUAUAA Ubqln1; Plic1 mmu-miR-199a 145 180 -CUUGUCCAU-----CAGA-----CUUGUGACCC- |::|:||| |||| ||||| |||| CGGGCGGGUUUCUGUGUCUUUUUGGAACAGUGGGA Ubqln1; Plic1 mmu-miR-199b 145 180 -CUUGUCCAU-----CAGA-----UUUGUGACCC- |::|:||| |||| :|||| |||| CGGGCGGGUUUCUGUGUCUUUUUGGAACAGUGGGA Ubqln1; Plic1 mmu-miR-19b 1602 1631 -AGUCAAA-ACGUACCU----AAACGUGU ||||| || |||| ||||:|| CUCAGUCUGUGGUUGGAAGACUUUGUACU Ubqln1; Plic1 mmu-miR-202 907 933 AGAAGGGUACG----CGAUAUGGAGA :|||:||| || ||||||| CUUUCUCAUUCAUAGGCAAUACCUCG Ubqln1; Plic1 mmu-miR-206 1245 1266 GGUGUGUGAAGGAAUGUAAGGU- |:|||: ||||| : ||| -GAUACAU-UCCUUUGGGACCAG Ubqln1; Plic1 mmu-miR-207 1537 1568 CUCCCUCCUCUCGG------UCCUCU--UCG- |||| |||| || |||||: :|| CAGGGUGGAG-GCAUGACUGAGGAGGUCGGCA Ubqln1; Plic1 mmu-miR-20a 401 432 GAUGGACGUGAUAUU-------CGUGAAAU- |:|:||: |: |||||||: GUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-214 758 779 GACG-GACAGACACGGACGACA ||| ||| ||||::||||| AUGCUCUGA-UGUGUUUGCUGG Ubqln1; Plic1 mmu-miR-215 1305 1337 CAGAC--AGUU---------UAGUAUCCAGUA |||| |||: ||| ||||||| CUCUGGUUCAGUAUUCUCUUAUCUUAGGUCAC Ubqln1; Plic1 mmu-miR-223 1281 1307 CCCCAUAAACUGU-----UUGACUGU |||| ||||| :||||:| AGGGUCGGUGACAUAUGUGACUGGCU Ubqln1; Plic1 mmu-miR-24 1050 1071 GACAAGGAC-GACUUGACUCGGU- ||: |||:|:||:|||| ---AUCUAUUCUGGAUUGGGCCAG Ubqln1; Plic1 mmu-miR-24* 1551 1579 -UGACUA---UAGUCGAGUCAUCCGUG- ||||| :||:|| ||| |||: GACUGAGGAGGUCGGCACAGCCUGCAUG Ubqln1; Plic1 mmu-miR-25 112 142 AGUCU-------GGCUCUGU-UCACGUUAC :||: : |||:|| ||||||:| AUAGGAAGUAUCUGGAGGCAGAGUGCAGUA Ubqln1; Plic1 mmu-miR-296 1024 1043 UGUCCUAACUCCC-CCCCGGGA :|| ||:||| ||||: -AGGGGGUGGGGGAGGGGUG-- Ubqln1; Plic1 mmu-miR-298 1556 1597 -CCUUCU----UGUCGG------------GAG-GAGACGG |||:| |||||| ||| ||||||| AGGAGGUCGGCACAGCCUGCAUGUGUGUGCUCUCUCUGCCU Ubqln1; Plic1 mmu-miR-29b 422 444 UUGUGACUAAAGUUUACCACGAU- :|||| |||||| ||||: UGCACUUUG--CAAAUGAUGCUGU Ubqln1; Plic1 mmu-miR-300 1554 1580 -CUUCUC---UCGAA-CGGGAACGUAU- ||:||| :|| |||: ||||: UGAGGAGGUCGGCACAGCCU--GCAUGU Ubqln1; Plic1 mmu-miR-301 472 500 CGAAAC---UGUUAUG----AUAACGUGAC |||| ||||||| |||||||| -AUUUGUAUACAAUACAAAUUAUUGCACA- Ubqln1; Plic1 mmu-miR-301b 401 429 -ACGAA----ACUGUUAUGGUAACGUGAC ||||| |||| |: || |||||| GUGCUUGUUGUGACUUUGGCA-UGCACUU Ubqln1; Plic1 mmu-miR-302c 729 754 -GGUGACU-UUGUACCU--UCGUGAAC |: || :|| |||| |||||| CCUUGUGCCGAC-UGGAGGAGCACUG- Ubqln1; Plic1 mmu-miR-30a-3p 712 748 -CGACGUUUGUA------------GGCUGACUUUC- ||||:|||: |||||||:|:| GGCUGUAAAUUACCUUUCCUUGUGCCGACUGGAGGA Ubqln1; Plic1 mmu-miR-30e* 713 748 -GACAUUUGUA------------GGCUGACUUUC- |||||||: |||||||:|:| GCUGUAAAUUACCUUUCCUUGUGCCGACUGGAGGA Ubqln1; Plic1 mmu-miR-31 1567 1598 -GUCG-----AUACGGUCGUAGA---ACGGA- |||| |:||: || ||| ||||| ACAGCCUGCAUGUGUGUGC-UCUCUCUGCCUU Ubqln1; Plic1 mmu-miR-324-3p 1637 1662 GGUCGU----CGUGGACCCCGUCACC :||| ||| |||||||||| -UGGCAAUAUGCAGGUGGGGCAGUGU Ubqln1; Plic1 mmu-miR-324-5p 1010 1035 GUGGUUACGGGA---UCCCCUACGC- :|:: |||: |||||:|| | -UUCGGAGCCUCAGAAGGGGGUGGGG Ubqln1; Plic1 mmu-miR-328 1032 1072 UGCCUUCCCGUCU----CU--------------CCCGGUC ||:|||| || || ||||||| -GGGGAGGGGUGAAACAGAAUCUAUUCUGGAUUGGGCCAGC Ubqln1; Plic1 mmu-miR-338 746 781 AGUUGUUU--UAGU----GACU------ACGACCU- |:|| |||| |||| ||||||: -GAGCACUGUAUCAUGCUCUGAUGUGUUUGCUGGGG Ubqln1; Plic1 mmu-miR-339 1013 1038 ACUC-GAGGA--CCUCCUGUCCCU- ||| ||| ||:|| :|||| GGAGCCUCAGAAGGGGGUGGGGGAG Ubqln1; Plic1 mmu-miR-340 1533 1563 -CCGA---UAUUUC---AUUGACUCUGCCU ||: :|::|| |:||||||: || AGGUCAGGGUGGAGGCAUGACUGAGGAGGU Ubqln1; Plic1 mmu-miR-342 142 181 -CUGCCCACGCUAAAGACA--------------CACUCU- |||||| | |:||||||| |||:|| CGACGGGCG-GGUUUCUGUGUCUUUUUGGAACAGUGGGAA Ubqln1; Plic1 mmu-miR-345 1546 1569 -CGUGACCUGA-UCC-CCAGUCGU- |||: |||| ||| ||||:||| GGCAU--GACUGAGGAGGUCGGCAC Ubqln1; Plic1 mmu-miR-346 124 154 -UCUCCGUC-CGUGA------GCCCGUCUGU :||||||| |::| |||||:|: UGGAGGCAGAGUGCAGUACGACGGGCGGGU- Ubqln1; Plic1 mmu-miR-34a 1640 1665 -UUGUUGGUCGAUUCUGUGACGGU- ||:| ||| |::|:|| ||:|| CAAUAUGCAGGUGGGGCAGUGUCAA Ubqln1; Plic1 mmu-miR-351 1228 1263 GUCCGAGUU------UCCCG-------AGGAGUCCCU- ||||| :|||: ||||: |||| ---UCUCAAACUGUUGGGGUGAUACAUUCCUUUGGGAC Ubqln1; Plic1 mmu-miR-370 773 801 UUGGUCCA--AGGU---GGGGUCGUCCG- :|::|| ||| |||| |:|||: UGCUGGGGCGUCCUGCUCCCC-GUAGGUG Ubqln1; Plic1 mmu-miR-377 595 623 -UGUUUUCAACGG-AA-----ACACACUA :||:||| |||| || ||||||: AGCAGAAG-UGCCAUUUAGUCUGUGUGGA Ubqln1; Plic1 mmu-miR-379 783 813 -GGAUGCAAGGUAU------CAGAUG-GU- |||:| ||:|| |||||| || UCCUGCUCCCCGUAGGUGUCGUCUACGCAG Ubqln1; Plic1 mmu-miR-412 1026 1046 UGCCGAUCACCUGGUCCACUUCA || |:| ||: :|||||| -GGGGUGG-GGGAGGGGUGAAA- Ubqln1; Plic1 mmu-miR-433-3p 734 762 UGUGGCU-----CCUCG-GG--UAGUACUA :|||| ||||| |: |||||| -UGCCGACUGGAGGAGCACUGUAUCAUGC- Ubqln1; Plic1 mmu-miR-434-5p 859 890 -CCAAGUU---UGGUAC----UCAGCUCGA- ||||| :|||| ||| ||||| CGGUUCUAAUUGCCAUAUAAAAGUAGAGCUG Ubqln1; Plic1 mmu-miR-449b 1567 1598 GGUCGAUCGU-----UACGU----GACGGA- |||| ||| :||| |||||| ACAGCCUGCAUGUGUGUGCUCUCUCUGCCUU Ubqln1; Plic1 mmu-miR-455-5p 339 358 GCUACAUCAGGUUUCCGUGUAU |||||| :|||||||: -UAUGUAGAAUAAAGGCAUU-- Ubqln1; Plic1 mmu-miR-463 1059 1085 ACU-ACCU-GUUG--UUUAAUCCAU- || |||: ||:| :|| |||||| GGAUUGGGCCAGCCUGAACUAGGUAA Ubqln1; Plic1 mmu-miR-467* 206 235 GUAUAUGUACGU----------CCGUGAAUG- |:|||||| ||||:|||: ---CUGCAUGCAUCAAACACUUGGCAUUUAUU Ubqln1; Plic1 mmu-miR-469 1527 1551 CCUGUGGUUCUAGUUACUUUCUCCGU- :|| |||:|||: | :|||||| --GUACAAAGGUCAG-GGUGGAGGCAU Ubqln1; Plic1 mmu-miR-483 1022 1045 UGUUCUGCCCUCCCCUCCUCACU- |||: || :|||||||:|||| -GAAGGGGGUGGGGGAGGGGUGAA Ubqln1; Plic1 mmu-miR-484 1032 1077 UAGCCCUCCCC-U--------------GAC---------UCGGACU |||||||| : ||| ||||||| --GGGGAGGGGUGAAACAGAAUCUAUUCUGGAUUGGGCCAGCCUGAA Ubqln1; Plic1 mmu-miR-485-5p 1053 1075 CUUAAGUA--GUGCCGGUCGGAGA |||| : ||||||||| -UAUUCUGGAUUGGGCCAGCCUG- Ubqln1; Plic1 mmu-miR-486 123 150 GAGCC-CCGUCGA--GUCAUGU--CCU- :|| ||||| ||||||: ||: -CUGGAGGCAGAGUGCAGUACGACGGGC Ubqln1; Plic1 mmu-miR-487b 1611 1635 -UC-ACCUACUGGGACAUG-CUAA :| |||| |||::||||| |:| UGGUUGGAAGACUUUGUACUGGUG Ubqln1; Plic1 mmu-miR-489 784 806 CGACGGUAUAUACA-CCACAGUAA ||||: || ||||||:| CCUGCUCCCC--GUAGGUGUCGUC Ubqln1; Plic1 mmu-miR-497 1564 1588 AUGU-UUGG-UGU-CACACGACGAC :|| |:|| :|| ||||| |||| GGCACAGCCUGCAUGUGUG-UGCUC Ubqln1; Plic1 mmu-miR-501* 781 806 GUUUAGGAAC--GGGC--CCACGUAA- :|||| |||| ||||: | --CGUCCUGCUCCCCGUAGGUGUCGUC Ubqln1; Plic1 mmu-miR-532 1533 1553 UGCCAGGAUGUGAGUUCCGUAC- |||| : | :||||||| -AGGUCAG--GGUGGAGGCAUGA Ubqln1; Plic1 mmu-miR-542-3p 1310 1338 AAAGUCAAUAGU---UAGA---CAGUGU |||||| || |||| ||||| GUUCAGUAUUCUCUUAUCUUAGGUCACU Ubqln1; Plic1 mmu-miR-542-5p 778 799 GCACUGUACUACUAGGGGC-UC- |:|:| || |||||| || --GGGCGUCCUGCUCCCCGUAGG Ubqln1; Plic1 mmu-miR-547 588 609 AGU-GAGUU-UCUACAUGGUUC || ||||: ||| ||:||| ACAUCUCAGCAGAAGUGCCAU- Ubqln1; Plic1 mmu-miR-615 1542 1567 UUCUCCCU-CUGGGUCCG--AGCCU :|||| |||: ||| |||| UGGAGGCAUGACUGAGGAGGUCGGC Ubqln1; Plic1 mmu-miR-666 1559 1588 -CCGAGAGUGUCG-----ACACGGGCGA- ||: |||||| ||||: :||| AGGUCGGCACAGCCUGCAUGUGUGUGCUC Ubqln1; Plic1 mmu-miR-667 1025 1044 GAACCCGACCCACCG-UCCACAGU ||| |||| || :|||| --GGGGGUGGG-GGAGGGGUGA-- Ubqln1; Plic1 mmu-miR-669a 657 682 UGUACUUGU------ACGUGUGUGUUGA |:||| ||:||| ||||| ---GGGACAUUUAAUUGUACAGACAACA Ubqln1; Plic1 mmu-miR-670 1506 1543 -AAGUGGUGU------------AUGUG---AGUCCCUA ||:||| : |||| |||||| CUUUACCUGGGAAGAAAACAUGUACAAAGGUCAGGGU- Ubqln1; Plic1 mmu-miR-671 760 788 GGAGGU--CGGGGA-GGUCCCGAAGGA- |||: |: ::| |::|||| |||| GCUCUGAUGUGUUUGCUGGGGCGUCCUG Ubqln1; Plic1 mmu-miR-674 950 972 AUGUGGUGAGGGUAGAGU-CACG- :|||||: : ||||| |||: --AGCCACUUGUUUCUCAAGUGUU Ubqln1; Plic1 mmu-miR-677 1535 1559 -AGUCUUCGAUUA-GUAGUGACUU- |||| :|: ||| |||||: GUCAG-GGUGGAGGCAUGACUGAGG Ubqln1; Plic1 mmu-miR-678 723 741 -GGAGGUCAGGAACGUGGCUCUG |||: ||||||::|||| ACCUU---UCCUUGUGCCGAC-- Ubqln1; Plic1 mmu-miR-679 1551 1574 -UGGUUC--UCAGUGGAGUGUCAGG- ||::|| :|||: ||||| || GACUGAGGAGGUCGG--CACAG-CCU Ubqln1; Plic1 mmu-miR-680 588 608 GGGGGUACAGUCGUCU--ACGGG ||| |||||||| |||| ---ACAUCUCAGCAGAAGUGCCA Ubqln1; Plic1 mmu-miR-683 1257 1285 CUCCUGUGUCGA----AUGUCG---UCC- :|||| |||:| |||||| ||| UGGGAC-CAGUUAAAAUACAGCGUUAGGG Ubqln1; Plic1 mmu-miR-686 729 752 AGAA-GUGGCAGACC-CUUCGUUA ||| ::||| |||| |:|||| CCUUGUGCCGACUGGAGGAGCAC- Ubqln1; Plic1 mmu-miR-688 793 812 CUUAUUCAUCAGCGGA--CGCU :||:|| ||||:|| || -CGUAGGU-GUCGUCUACGCA- Ubqln1; Plic1 mmu-miR-691 640 662 AAAAGACGG--AGAGAAGUCCUUA |||| : ||||||:|||:| --CUCUGGUUAUCUCUUUAGGGAC Ubqln1; Plic1 mmu-miR-693-3p 170 208 AAUGUCGGUGU------------AGACU---UUCGACG- ||||: : | ||||: |:||||| -AACAGUGGGAAUCAAUGUUUCUUCUGGUUAAGGCUGCU Ubqln1; Plic1 mmu-miR-693-5p 1616 1642 -CUUUUGAAA---GCCUAC--ACCGAC |||:||||| | |:|| |||| GGAAGACUUUGUACUGGUGAAUGGCA- Ubqln1; Plic1 mmu-miR-697 835 859 AGAGGUGUCCUGGU--CCUACAA- :|:||| ||| ||||||| CUUUCACUGGAAGUGCGGAUGUUU Ubqln1; Plic1 mmu-miR-699 1554 1575 GCUCGGUCCAGC-GUGACGGA- ||| |||||| ||| |||| UGAGG-AGGUCGGCACAGCCUG Ubqln1; Plic1 mmu-miR-702 1013 1043 -CUCG--------CCCCAUUUCC-CACCCGU |||| |||||:::|| | |||: GGAGCCUCAGAAGGGGGUGGGGGAG-GGGUG Ubqln1; Plic1 mmu-miR-706 145 159 AAAAAACUCUGUCCCAAAGAGA :|:| |||||||| ------CGGGC-GGGUUUCUG- Ubqln1; Plic1 mmu-miR-707 1534 1557 GCA-UCCGUUCGCCGUACUGAC- || ||| :| |||||||||| GGUCAGGGUGGAGGCAUGACUGA Ubqln1; Plic1 mmu-miR-709 1585 1606 AGGAG-GACGGAGA-CGGAGG :||| ||||||: ||||| CUCUCUCUGCCUUACGCCUCA Ubqln1; Plic1 mmu-miR-712 1003 1039 CCAUGGCGGG--------------CCCACUUCCUC- ||:|:|::| ||||| |||| CGUGCUGUUCGGAGCCUCAGAAGGGGGUGGGGGAGG Ubqln1; Plic1 mmu-miR-712* 786 813 GUUGU-GGGCCCCCACU---GA-GCGU- :| |||| |||| || |||| -UGCUCCCCGUAGGUGUCGUCUACGCAG Ubqln1; Plic1 mmu-miR-718 1527 1549 GCUGUGGG-CCGG-CCCGCCUUC- :|| ||:| |||:|||:| --GUACAAAGGUCAGGGUGGAGGC Ubqln1; Plic1 mmu-miR-741 1571 1593 -GAUGUAUCUUAC-CGUAGAGAGU ||:|||: :|| || |||||| CCUGCAUGU-GUGUGC-UCUCUCU Ubqln1; Plic1 mmu-miR-744 773 798 -CGACAAU-CGGGAUC-GGGGCGU- |||| : |:|||: |||||:| UGCUGGGGCGUCCUGCUCCCCGUAG Ubqln1; Plic1 mmu-miR-759 415 433 CAGUUUUAACAA-ACGUGAGACG- ||| ||||||:||| ------UUUGGCAUGCACUUUGCA Ubqln1; Plic1 mmu-miR-760 787 824 -GAGGGGUGUCU-----GGGU-C-UCGG--CUUAAAG ||||||::||: :|:| | ||| ||:||| GCUCCCCGUAGGUGUCGUCUACGCAGCAUUGAGUUUA Ubqln1; Plic1 mmu-miR-761 1556 1581 ACA--CAGUCAAAGUGGGACG-ACG- | |||:| || ||||| ||: AGGAGGUCGGCA-CAGCCUGCAUGUG Ubqln1; Plic1 mmu-miR-762 1588 1611 CGAGACAGGGC--CGGGGUCGGGG ||||| ||: |||:|||:|: UCUCUG-CCUUACGCCUCAGUCUG Ubqln1; Plic1 mmu-miR-764-3p 749 788 -UGUCA----ACGG-----------UGAUACCGGAGGA- || || |||: :|| ||| |||| CACUGUAUCAUGCUCUGAUGUGUUUGCUGGGGCGUCCUG Ubqln1; Plic1 mmu-miR-96 1637 1667 -UCGUU-----UUUACA-CGAUCACGGUUU- :|||| |::|| || ||||:|||| UGGCAAUAUGCAGGUGGGGC-AGUGUCAAAA Ubqln1; Plic1 mmu-miR-106a 423 430 --------------AUGGACGU------GACAAU-CGUGAAAC |:|:||: :|| |||||||| UUCUGGUACAAUAGUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-106b 423 430 UA------------------GACG-UGACA--GU-CGUGAAAU :||: ||| || |||||||: UUCUGGUACAAUAGUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-133a 1258 1265 -----------UGUCGACCA-ACUUC---------CCCUGGUU || |:||| ||| |||||||: CUAACUCUCAAACUGUUGGGGUGAUACAUUCCUUUGGGACCAGU Ubqln1; Plic1 mmu-miR-133b 1258 1265 AU------------CGACCA-ACUUC---------CCCUGGUU |:||| ||| |||||||: CUAACUCUCAAACUGUUGGGGUGAUACAUUCCUUUGGGACCAGU Ubqln1; Plic1 mmu-miR-139 1335 1342 UCU--------------------------GUGCACGUGACAUCU :| || |||||||| ACUGGCUCUGGUUCAGUAUUCUCUUAUCUUAGGU-CACUGUAGU Ubqln1; Plic1 mmu-miR-140* 1608 1615 AG--GCAC-CA------AGAUG------------GGACACCAU :||| || |||:| :||||||| UGCAUGUGUGUGCUCUCUCUGCCUUACGCCUCAGUCUGUGGUU Ubqln1; Plic1 mmu-miR-17-5p 423 430 ------------UGAUGGACGUGACAUU---------CGUGAAAC | |:|:||: |||:| |||||||| UUCUGGUACAAUAGUGCUUGU--UGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-202 925 932 A-----------------GAAGGGUACG----CGAUAUGGAGA :|||:||| | || ||||||| UCUCUUGGGUUUAUCAGCUUUCUCAUUCAUAGGCAAUACCUCG Ubqln1; Plic1 mmu-miR-206 1248 1255 GGUGUGUGAA-GGA----------------------AUGUAAGGU :|||| ||| |||||||| UUC--UACUUGCCUAACUCUCAAACUGUUGGGGUGAUACAUUCCU Ubqln1; Plic1 mmu-miR-20a 423 430 G-------------AUGGACG----UGAUAUU---CGUGAAAU |:|:||: ||| |||||||: UUCUGGUACAAUAGUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-20b 423 430 --------------AUGGACG----UGAUACU---CGUGAAAC |:|:||: ||| ||: |||||||| UUCUGGUACAAUAGUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-miR-215 1329 1336 C-----------AGAC-----------AGUUUAGUAUCCAGUA |||| || ||| ||||||| UAUGUGACUGGCUCUGGUUCAGUAUUCUCUUAUCUUAGGUCAC Ubqln1; Plic1 mmu-miR-291b-3p 422 429 CUGU---------------------UUGUUUUACC-UACGUGAAA :|| ||| ||||||||| UUUCUGGUACAAUAGUGCUUGUUGUGACUU--UGGCAUGCACUUUG Ubqln1; Plic1 mmu-miR-302c* 1371 1378 GU------------CGU-CCAUUGGGG--------UACAAUUU |:| ||| :||| |||||||| CUGUAGUCUCUCUUGUAUGGUUGCCCAAAAUUAUAAUGUUAAAU Ubqln1; Plic1 mmu-miR-320 904 911 AAG--------------CGGGAGAGUUG------GGUCGAAAA ||: |||| :||||||| UGCCAUAUAAAAGUAGAGCUGUCUCUUGGGUUUAUCAGCUUUC Ubqln1; Plic1 mmu-miR-324-3p 1654 1661 GG-----------------UCGU----CGUGGACCCCGUCACC :||| ||| |||||||||| AGACUUUGUACUGGUGAAUGGCAAUAUGCAGGUGGGGCAGUGU Ubqln1; Plic1 mmu-miR-429 1313 1320 U-----------------------GCCGUAAUGGUCU-GUCAUAAU :||| | | ||||||| GUUAGGGUCGGUGACAUAUGUGACUGGCU---CUGGUUCAGUAUUC Ubqln1; Plic1 mmu-miR-489 1127 1134 CG----------------------ACGGUAUAUACACCACAGUAA ||| ||||| || |||||||| AAUUAAGAUUCUGUGAAGAUUCUAUGC-AUAUA-GUAGUGUCAUUU Ubqln1; Plic1 mmu-miR-494 853 860 U------------------------CCAAAGGGCACAUACAAAGU || : || |||||||: AGUUUAUUGAAAUGUCGCUUUCACUGGAAGUGCGG--AUGUUUCGG Ubqln1; Plic1 mmu-miR-667 796 803 GAACC--------CGACCCAC------------CGUCCACAGU |||||| |:|||||||: CUCUGAUGUGUUUGCUGGGGCGUCCUGCUCCCCGUAGGUGUCGU Ubqln1; Plic1 mmu-miR-707 1548 1555 GCA-----------------------UCCGUUCGCCGUACUGAC :|| : |||||||||| UGGGAAGAAAACAUGUACAAAGGUCAGGGUGGA-GGCAUGACUGA Ubqln1; Plic1 mmu-miR-93 423 430 G-------------AUGGACGUG-CU-----UGU-CGUGAAAC |:|:||: || :|| |||||||| UUCUGGUACAAUAGUGCUUGUUGUGACUUUGGCAUGCACUUUGC Ubqln1; Plic1 mmu-let-7f 1579 1598 ugAUAUGUUAGAUGAUGGAGU |:|:| ||| ||:|||:| tgTGTGCTCTCT-CTGCCTTA Ubqln1; Plic1 mmu-miR-101a 1317 1340 gAAGUCAAUAGUGU-CA-UGACAU ||| ||||| :| || |||||| aTTCTCTTATCTTAGGTCACTGTA Ubqln1; Plic1 mmu-miR-101b 1317 1340 gAAGUCGAUAGUGU-CA-UGACAU ||| :|||| :| || |||||| aTTCTCTTATCTTAGGTCACTGTA Ubqln1; Plic1 mmu-miR-103 743 765 aguaUCGGGACAUGUUACGAcga ||| |||||: ||||| gaggAGCACTGTATCATGCTctg Ubqln1; Plic1 mmu-miR-106a 402 430 AUGGACG----UG--ACAAU-CGUGAAAC |:|:||: || || | |||||||| TGCTTGTTGTGACTTTGGCATGCACTTTG Ubqln1; Plic1 mmu-miR-106b 408 430 uAGAC-GUGACAGU-CGUGAAAu | || | :|| || ||||||| tTGTGACTTTGGCATGCACTTTg Ubqln1; Plic1 mmu-miR-107 743 765 acuaUCGGGACAUGUUACGAcga ||| |||||: ||||| gaggAGCACTGTATCATGCTctg Ubqln1; Plic1 mmu-miR-132 1472 1493 gcugguACCGACAUCUGACAau |||| ||||||| gcaggtTGGCCCCAGACTGTat Ubqln1; Plic1 mmu-miR-133a 1234 1265 UGUCGA-CCAACU---U------CCCCUGGUu || |:| || ||| | ||||||| ACTGTTGGGGTGATACATTCCTTTGGGACCAg Ubqln1; Plic1 mmu-miR-133b 1245 1265 aucgaccaacuucCCCUGGUu ||||||| gatacattcctttGGGACCAg Ubqln1; Plic1 mmu-miR-134 1251 1270 ggGGAGACCAGUUGGUCAGUgu |||:||| :||||||:| ttCCTTTGG--GACCAGTTAaa Ubqln1; Plic1 mmu-miR-135a 1130 1153 AGUGUAUCC-UUAUUUUUCGGUAu |||: |:|| :| |||:||||:| TCATTTGGGTGAAAAAGAGCCGTt Ubqln1; Plic1 mmu-miR-135b 1131 1153 GUGUAUCC-UUACUUUUCGGUAu ||: |:|| :| ||:||||:| CATTTGGGTGAAAAAGAGCCGTt Ubqln1; Plic1 mmu-miR-139 1326 1342 ucugUGCACGUGACAUCu | || |||||||| tcttAGGT-CACTGTAGt Ubqln1; Plic1 mmu-miR-140* 1593 1615 aGGCA--CCAAGAUGGGACACCAu || | | || | :||||||| gCCTTACGCCTC-AGTCTGTGGTt Ubqln1; Plic1 mmu-miR-149 1037 1071 CCUCACU---UCU-------G---UGCCUCGGUCu ||:|||| ||| | |: |:||||| GGGGTGAAACAGAATCTATTCTGGATTGGGCCAGc Ubqln1; Plic1 mmu-miR-150 1015 1036 gugaccaugUUCCCAACCCUCU |:||| ||||:|| agcctcagaAGGGGGTGGGGGA Ubqln1; Plic1 mmu-miR-151 1594 1611 GGAGUUCCUCGGAGUCAGAuc |||:| |||||||||| CCTTA---CGCCTCAGTCTgt Ubqln1; Plic1 mmu-miR-15b 769 790 ACAUUUGGUACUACACGACGAu ||| :|:: |: || ||||| TGTTTGCTGGGGCGTCCTGCTc Ubqln1; Plic1 mmu-miR-16 986 1012 gcggUUAUAAAU-----GCACGACGAu |||| ||: |||||||:| aagaAATAGTTGAATGTCGTGCTGTTc Ubqln1; Plic1 mmu-miR-17-5p 400 430 UGAUGGACG----UGA---CAUUCGUGAAAC | |:|:||: ||| | | |||||||| AGTGCTTGTTGTGACTTTGGCATGCACTTTG Ubqln1; Plic1 mmu-miR-17-5p 720 755 UGAUGG--------ACG--UGACAU--UCGUGAAAc |:|||| ||| |||| | |||||| | ATTACCTTTCCTTGTGCCGACTGGAGGAGCACTGTa Ubqln1; Plic1 mmu-miR-18 407 430 auAGAC-GUGAUC-UACGUGGAAu | || | :|:| ||||||:|| gtTGTGACTTTGGCATGCACTTTg Ubqln1; Plic1 mmu-miR-182 856 875 ACACUCAAGAUGGUAACGGUuu | | :|||||| ||||||| TTTCGGTTCTA--ATTGCCAta Ubqln1; Plic1 mmu-miR-183 1102 1134 GUCACU--UAAGAU--G------GUCACGGUAu | |||| |||||| | :||||:||| CTGTGAAGATTCTATGCATATAGTAGTGTCATt Ubqln1; Plic1 mmu-miR-184 278 299 UGGGAAUAGUCAAG-AGGCAGGU |:::||:|| | | ||:||||| ATTTTTGTC-CTGCATCTGTCCA Ubqln1; Plic1 mmu-miR-185 1333 1349 cuUGACGGAAAGAGAGgu |||| : |||||| tcACTG-TAGTCTCTCtt Ubqln1; Plic1 mmu-miR-191 66 94 ucgACGAA-------AACCCUAAGGCAac ||||| |||||||||:|| acaTGCTTTATTTCATTGGGATTCTGTgc Ubqln1; Plic1 mmu-miR-192 1521 1539 acaGU-UAAGUAUCCAGUC || :| || ||||||| aaaCATGTACAAAGGTCAG Ubqln1; Plic1 mmu-miR-193 1512 1541 GACCC------UGAAACA----UCCGGUCaa ||||| || ||| |||:||| CTGGGAAGAAAAC-ATGTACAAAGGTCAGgg Ubqln1; Plic1 mmu-miR-194 77 101 AGGUGUACCUCA---ACGACAAUGU |:||: ||| | ||||||||:| TTCATTGGGATTCTGTGCTGTTATA Ubqln1; Plic1 mmu-miR-195 180 211 cgGUUAUAAAGA----------C-ACGACGau ||||:||||| | |||||| atCAATGTTTCTTCTGGTTAAGGCTGCTGCat Ubqln1; Plic1 mmu-miR-199a 146 178 CUUGUCCA-----UCAGA-----CUUGUGACCC |::|:||| |||| ||||| |||| GGGCGGGTTTCTGTGTCTTTTTGGAACAGTGGG Ubqln1; Plic1 mmu-miR-199b 146 178 CUUGUCCA-----UCAGA-----UUUGUGACCC |::|:||| |||| :|||| |||| GGGCGGGTTTCTGTGTCTTTTTGGAACAGTGGG Ubqln1; Plic1 mmu-miR-19b 1603 1630 AGUCA-AAACGUACCU----AAACGUGu ||||| | || |||| ||||:|| TCAGTCTGTGGTTGGAAGACTTTGTACt Ubqln1; Plic1 mmu-miR-202 907 932 agAAGGGUACG----CGAUAUGGAGa |||:||| | || ||||||| ctTTCTCATTCATAGGCAATACCTCg Ubqln1; Plic1 mmu-miR-206 1228 1255 gGUGUGUGAAGG----A--AUGUAAGGu | || ||| :: | |||||||| tCTCAAACTGTTGGGGTGATACATTCCt Ubqln1; Plic1 mmu-miR-20b 402 430 AUGGACG----UGAUACU---CGUGAAAC |:|:||: ||| ||: |||||||| TGCTTGTTGTGACTTTGGCATGCACTTTG Ubqln1; Plic1 mmu-miR-214 768 791 gACGGACAGACAC----GGACGAca ||::|| ||| | |||||| gTGTTTG-CTGGGGCGTCCTGCTcc Ubqln1; Plic1 mmu-miR-24 1047 1069 gacaAGG-ACGACUUGACUCGGU ||: | |||:|:||:|||| agaaTCTATTCTGGATTGGGCCA Ubqln1; Plic1 mmu-miR-24* 1552 1568 UGACUAUAGUCGAGUCAUCCGUG ||||| : || || ||||| ACTGAGG--AG----GTCGGCAC Ubqln1; Plic1 mmu-miR-25 116 141 agUC-UGG--CUCUGU-UCACGUUAc || |:| |||:|| ||||||:| gaAGTATCTGGAGGCAGAGTGCAGTa Ubqln1; Plic1 mmu-miR-291b-3p 406 429 cuguuuguuuuACC-UACGUGAAA ||| ||||||||| tgttgtgacttTGGCATGCACTTT Ubqln1; Plic1 mmu-miR-296 1023 1044 UGUCCUAACUCCC-CCCCggga | :||: ||:||| |||| AAGGGGGTGGGGGAGGGGtgaa Ubqln1; Plic1 mmu-miR-298 1575 1595 ccuucuuguCGGGAGGAGACGG ||:| :||||||| catgtgtgtGCTC-TCTCTGCC Ubqln1; Plic1 mmu-miR-300 1555 1578 CUUCUCUCGAACG-G--GAACGUAu ||:||| |: || | | ||||| GAGGAG-GTCGGCACAGCCTGCATg Ubqln1; Plic1 mmu-miR-301 471 500 cgAAAC---UGUUAUG----AUAACGUGac |||| ||||||| |||||||| taTTTGTATACAATACAAATTATTGCACat Ubqln1; Plic1 mmu-miR-301b 406 428 ACGAAACUGUUAUGGUAACGUGAc ||:| |||| |: | |||||| TGTTGTGACTTTGGC-ATGCACTt Ubqln1; Plic1 mmu-miR-302c 736 754 GG-UGACUUUGUACCUUCGUGAac || ||||:| |:|||||| CCGACTGGA-----GGAGCACTgt Ubqln1; Plic1 mmu-miR-302c* 1348 1378 guCGU-CCAUUGGG--------GUACAAUUU |:| ||| :||| |||||||| ttGTATGGTTGCCCAAAATTATAATGTTAAA Ubqln1; Plic1 mmu-miR-30a-3p 713 746 CGACGUUU---------GUA---GGCUGACUUUC ||||:||| | | |||||||:|:| GCTGTAAATTACCTTTCCTTGTGCCGACTGGAGG Ubqln1; Plic1 mmu-miR-30e* 714 746 GACAUUU---------GUA---GGCUGACUUUC ||||||| | | |||||||:|:| CTGTAAATTACCTTTCCTTGTGCCGACTGGAGG Ubqln1; Plic1 mmu-miR-31 1572 1596 GUCG-AUACGGUCG-UAGA-ACGGA | || |:||: || ||| ||||| CTGCATGTGTGTGCTCTCTCTGCCT Ubqln1; Plic1 mmu-miR-320 883 911 aagCG--GGAGAGUU----GGGUCGAAAa || :||||::: :||||||| agaGCTGTCTCTTGGGTTTATCAGCTTTc Ubqln1; Plic1 mmu-miR-324-3p 1639 1661 gGUCGU-CGUGGACCCCGUCACc || :| ||| |||||||||| gCAATATGCAGGTGGGGCAGTGt Ubqln1; Plic1 mmu-miR-324-5p 1009 1033 gugGUUACGG-G--AUCCCCUACgc |:: ||| | |||||:|| gttCGGAGCCTCAGAAGGGGGTGgg Ubqln1; Plic1 mmu-miR-328 1049 1070 ugccuucccgucucuCCCGGUC ||||||| aatctattctggattGGGCCAG Ubqln1; Plic1 mmu-miR-338 757 779 aguuguuuuagugacuACGACCu |||||| catgctctgatgtgttTGCTGGg Ubqln1; Plic1 mmu-miR-340 1539 1562 CCGAUAUUUC--AUUGACUCUGCCu || |: :|:| |:||||||: || GGGTG-GAGGCATGACTGAGGAGGt Ubqln1; Plic1 mmu-miR-342 143 165 CUGCCCACGCUAAAGACACAcucu |||||| | |:||||||||| GACGGGCG-GGTTTCTGTGTcttt Ubqln1; Plic1 mmu-miR-345 1547 1567 CGUGACCUGA-UCC-CCAGUCGU |||: |||| ||| ||||:||| GCAT--GACTGAGGAGGTCGGCA Ubqln1; Plic1 mmu-miR-346 112 135 UCUCCGUCCGUGAGC-CCGUCUgu | ||| || || | |||||| ATAGGAAGTATCTGGAGGCAGAgt Ubqln1; Plic1 mmu-miR-34a 1641 1663 UUGUUGGUCGAUUCUGUGACGGU ||:| ||| |::|:|| ||:|| AATATGCAGGTGGGGCAGTGTCA Ubqln1; Plic1 mmu-miR-351 1225 1261 guccGAGUUU------CCC-------GAGGAGUCCCU |||||| ||| :||||: |||| aactCTCAAACTGTTGGGGTGATACATTCCTTTGGGA Ubqln1; Plic1 mmu-miR-370 790 817 uuGG--UCCAAGGUGG--G-GUCGUccg || |||| :|::| | ||||| ccCCGTAGGTGTCGTCTACGCAGCAttg Ubqln1; Plic1 mmu-miR-377 596 622 uGUUUUCAACGG--AA----ACACACua ||:||| |||| || |||||| gCAGAAG-TGCCATTTAGTCTGTGTGga Ubqln1; Plic1 mmu-miR-379 784 810 GGAUGCAAGGUAU------CAGAUGgu |||:| ||:|| |||||| CCTGCTCCCCGTAGGTGTCGTCTACgc Ubqln1; Plic1 mmu-miR-412 1025 1046 ugCCGAUCACCUGGUCCACUUca || |:| ||| :|||||| ggGGGTGGGGGA-GGGGTGAAac Ubqln1; Plic1 mmu-miR-429 1300 1320 UG-CCGUAAUGGUC-UGUCAUAAu || ||| | |::| ||||||| ACTGGC--T-CTGGTTCAGTATTc Ubqln1; Plic1 mmu-miR-433-3p 737 762 ugUGG-CUCCUCGGG---UAGUACua ||: ||||||| | |||||| cgACTGGAGGAGCACTGTATCATGct Ubqln1; Plic1 mmu-miR-434-5p 860 888 CCAAGUUU---GGUA----CUCAGCUCGA ||||| || |||| ||| ||||| GGTTCTAATTGCCATATAAAAGTAGAGCT Ubqln1; Plic1 mmu-miR-455-5p 338 359 gcUACAUCAGGUUUCCGUguau |||||| :||||||| ttATGTAGAATAAAGGCAttaa Ubqln1; Plic1 mmu-miR-467* 209 233 GUAUAU-GUACGU---CCGUGAAUg |||: | || || ||||:||| CATGCATCAAACACTTGGCATTTAt Ubqln1; Plic1 mmu-miR-469 1525 1549 ccugUGGUUCUAGUUACUUUCUCCGU || |||:|||: |: :|||||| atgtACAAAGGTCAG-GGTGGAGGCA Ubqln1; Plic1 mmu-miR-483 1021 1043 UGUUCUGCCCUCCCCUCCUCACU | |||: || :|||||||:|||| AGAAGGGGGTGGGGGAGGGGTGA Ubqln1; Plic1 mmu-miR-484 1055 1075 uAGCCCU-CCCCUGACUCGGACU || ||| ||| | ||||||| tTCTGGATTGGGCC--AGCCTGA Ubqln1; Plic1 mmu-miR-485-5p 1052 1075 cuUAAG---UAGUGCCGGUCGGAga |||| ||:: ||||||||| ctATTCTGGATTG-GGCCAGCCTga Ubqln1; Plic1 mmu-miR-487b 1613 1634 ucACCUACUGGGACAUG-CUAa |||| |||::||||| |:| gtTGGAAGACTTTGTACTGGTg Ubqln1; Plic1 mmu-miR-489 1114 1134 cgACGGUAUAUACACCACAGUAA || |||||| || |||||||| taTG-CATATA-GTAGTGTCATT Ubqln1; Plic1 mmu-miR-489 787 805 CGACGGUAUAUACACCACAGUAa ||| || :|| ||||||:| GCT-CCCCGTA---GGTGTCGTc Ubqln1; Plic1 mmu-miR-494 833 860 uCCAAAGGG-----CA--CAUACAAAGu | |||| | || | ||||||| cGCTTTCACTGGAAGTGCGGATGTTTCg Ubqln1; Plic1 mmu-miR-497 1566 1587 aUGUUUGGUGU-CACACGACGAc |||: |::|| ||||| |||| cACAGCCTGCATGTGTG-TGCTc Ubqln1; Plic1 mmu-miR-501* 779 805 guuuAGGA--ACGGGC--CCAC-GUAa |||| | |||| |||| |:| ggcgTCCTGCTCCCCGTAGGTGTCGTc Ubqln1; Plic1 mmu-miR-532 1532 1551 UGCCAGGAUGUGAGUUCCGUAC | |||| | : | :||||||| AAGGTC--AGGGTGGAGGCATG Ubqln1; Plic1 mmu-miR-542-5p 776 796 gCACUGUACUACUAGGGGCuc | |:|:| || |||||| tGGGGCGTCCTGCTCCCCGta Ubqln1; Plic1 mmu-miR-547 588 609 aGU-GAGUU-UCUACAUGGUuc || ||||: ||| ||:||| aCATCTCAGCAGAAGTGCCAtt Ubqln1; Plic1 mmu-miR-666 1583 1602 cCGAGAGUGUCGACACGG---GCGa |||||| | |||| ||| tGCTCTCTC-----TGCCTTACGCc Ubqln1; Plic1 mmu-miR-666 1560 1576 CCGAGAGUGUCGACACGGGCGa ||: |||| |||:|| GGTCGGCACA-----GCCTGCa Ubqln1; Plic1 mmu-miR-667 775 803 GAACCCGACCCAC------CGUCCACAGu || |||| || |:||||||| CTGGGGCGTCCTGCTCCCCGTAGGTGTCg Ubqln1; Plic1 mmu-miR-667 1023 1043 gaaCCCGACCCACCGUCCACAgu ||| |||| || ||| || aagGGGGTGGG-GG-AGGGGTga Ubqln1; Plic1 mmu-miR-669a 660 681 UGUACUUGUACGUGUGUGUUGa |||| | ||:||| ||||| ACATTTAATTGTACAGACAACa Ubqln1; Plic1 mmu-miR-670 1519 1543 aagUGGUGUAUGU---GAGUCCCua | ||::|||| |||||| gaaAACATGTACAAAGGTCAGGGtg Ubqln1; Plic1 mmu-miR-674 948 970 AUGUGGUGAGGGUAGAG-UCACg |: :|||||: : |||| |||| TGAGCCACTTGTTTCTCAAGTGt Ubqln1; Plic1 mmu-miR-677 1536 1557 AGUCUUCGAUUAGUAGUGACUu ||||:: |: ||| ||||| TCAGGGTGGAGGCATGACTGAg Ubqln1; Plic1 mmu-miR-678 721 742 ggaGGUCAGGAACGUGGCUcug || ||||||::|||| ttaCCTTTCCTTGTGCCGActg Ubqln1; Plic1 mmu-miR-679 1552 1573 UGGUUC--UCAGUGGAGUGUCAGg ||::|| :|||: ||||| | ACTGAGGAGGTCG--GCACAGCCt Ubqln1; Plic1 mmu-miR-680 585 607 ggggGUACAGUCGUCU--ACGGg ||| |||||||| |||| taaaCATCTCAGCAGAAGTGCCa Ubqln1; Plic1 mmu-miR-686 729 752 aGAA-GUGGCAGACC-CUUCGUua ||| ::||| |||| |:|||| cCTTGTGCCGACTGGAGGAGCAct Ubqln1; Plic1 mmu-miR-688 792 810 cuuAUUCAUCAGCGGACGCu ||:|| ||||:|| || ccgTAGGT-GTCGTCTACGc Ubqln1; Plic1 mmu-miR-691 638 661 aaaAGAC--GGAGAGAAGUCCUUa |||| : ||||||:|||:| aacTCTGGTTATCTCTTTAGGGAc Ubqln1; Plic1 mmu-miR-693-3p 181 206 aauguCGGUGUAGAC---UUUCGACG |:: | |||| ||:||||| tcaatGTTTCTTCTGGTTAAGGCTGC Ubqln1; Plic1 mmu-miR-693-5p 1617 1642 CUUUUGAAA---GCCUAC--ACCGac |||:||||| | |:|| |||| GAAGACTTTGTACTGGTGAATGGCaa Ubqln1; Plic1 mmu-miR-702 1014 1035 CUC-GCCCCAUUUCCCACCCgu ||| | | |::||||||| GAGCCTCAGAAGGGGGTGGGgg Ubqln1; Plic1 mmu-miR-702 1033 1068 CUCGCCCCAUU---UC----------CC--ACCCGu |:| |||||:| || || ||||| GGGAGGGGTGAAACAGAATCTATTCTGGATTGGGCc Ubqln1; Plic1 mmu-miR-706 135 159 aaaaaacuCUGU---CCCAAAGAga |||: |||||||| tgcagtacGACGGGCGGGTTTCTgt Ubqln1; Plic1 mmu-miR-707 1534 1555 gCA-UCCGUUCGCCGUACUGAC || ||| :| |||||||||| gGTCAGGGTGGAGGCATGACTG Ubqln1; Plic1 mmu-miR-709 1580 1598 aggAGGACGGAGACGGAgg | || :|||||||| gtgTGCTCTCTCTGCCTta Ubqln1; Plic1 mmu-miR-712 1013 1037 CCAUGGCG----GGCCCACUUCCUC || :|| | |||||::|||| GGAGCCTCAGAAGGGGGTGGGGGAG Ubqln1; Plic1 mmu-miR-717 145 166 uCUCUUCCAUAGAGACAGAcuc |:| :||| ||| ||||| cGGGCGGGTTTCTGTGTCTttt Ubqln1; Plic1 mmu-miR-741 1572 1592 GAUGUAUCUUACCGUAGAGAGu ||:||| | :|| |||||| CTGCAT-GTGTGTGCTCTCTCt Ubqln1; Plic1 mmu-miR-743 784 805 aGAUGAGUCG-AACCACAGAAa ||:||| | | |||||| | cCTGCTCCCCGTAGGTGTCGTc Ubqln1; Plic1 mmu-miR-744 774 796 CGACAAU-CGGGAU-CGGGGCGU |||| : |:|||: |||||:| GCTGGGGCGTCCTGCTCCCCGTA Ubqln1; Plic1 mmu-miR-758 1648 1667 auCACCUGGUC-CAGUGUUu ||||: ||| |||| || agGTGGGGCAGTGTCAAAAg Ubqln1; Plic1 mmu-miR-759 410 431 CAGUUUUAACAAACGUGAGACG || | | | ||||||:||| GTGACTTTGGCATGCACTTTGC Ubqln1; Plic1 mmu-miR-760 788 823 GAGGGGUGUC---------UGGGUCUCGGCUUAAAg ||||||::|| || ||| ::||:||| CTCCCCGTAGGTGTCGTCTACGCAGCATTGAGTTTa Ubqln1; Plic1 mmu-miR-761 1558 1579 acaCAGUCAAAGUG--GGACG-ACg |||:| ||| ||||| || gagGTCGG---CACAGCCTGCATGt Ubqln1; Plic1 mmu-miR-762 1584 1610 CGAGACAG--GG---CCGGGGUCGGgg ||||| || || |||:|||:| GCTCTCTCTGCCTTACGCCTCAGTCtg Ubqln1; Plic1 mmu-miR-764-3p 765 786 uguCAACGGUGAUACCGGAGGA || :::||: ||| |||| gatGTGTTTGCTGGGGCGTCCT Ubqln1; Plic1 mmu-miR-93 401 430 gAUGGAC-GUGCU-----UGU-CGUGAAAC |:|:|| :::|| :|| |||||||| gTGCTTGTTGTGACTTTGGCATGCACTTTG Ubqln1; Plic1 mmu-miR-93 733 755 gAUGGACGUGCUUGUCGUGAAAc |:|| | ||: |||||| | gTGCCGACTGGAGGAGCACTGTa Ubqln1; Plic1 mmu-miR-96 1638 1665 uCGUU-----UUUACACGAUCACGGUUU |||| |::|| | ||||:|||| gGCAATATGCAGGTGGGGCAGTGTCAAA

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Ubqln1 RAID00018814 mmu-miR-429-3p miRNA MIMAT0001537 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID00026114 mmu-miR-1a-3p miRNA MIMAT0000123 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00067796 mmu-let-7e-5p miRNA MIMAT0000524 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00140677 mmu-miR-3098-3p miRNA MIMAT0014918 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00146463 mmu-miR-669k-5p miRNA MIMAT0017323 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00168409 mmu-miR-24-3p miRNA MIMAT0000219 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00215557 mmu-miR-295-3p miRNA MIMAT0000373 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00218782 mmu-miR-98-5p miRNA MIMAT0000545 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00388911 mmu-miR-18b-5p miRNA MIMAT0004858 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID00403315 mmu-miR-183-5p miRNA MIMAT0000212 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00466240 mmu-miR-7229-3p miRNA MIMAT0028427 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00474408 mmu-miR-335-5p miRNA MIMAT0000766 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00506568 mmu-miR-1264-3p miRNA MIMAT0014803 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00619524 mmu-miR-466l-3p miRNA MIMAT0005830 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00683216 mmu-miR-153-3p miRNA MIMAT0000163 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00845519 mmu-miR-19b-3p miRNA MIMAT0000513 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00856494 mmu-miR-1952 miRNA MIMAT0009423 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00864939 mmu-miR-1892 miRNA MIMAT0007871 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00887102 mmu-miR-148a-3p miRNA MIMAT0000516 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID00900978 mmu-miR-139-5p miRNA MIMAT0000656 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00910334 mmu-let-7c-5p miRNA MIMAT0000523 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00916182 mmu-miR-200c-3p miRNA MIMAT0000657 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID00920633 mmu-miR-495-3p miRNA MIMAT0003456 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID00949020 mmu-miR-23b-3p miRNA MIMAT0000125 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01009276 mmu-let-7c-2-3p miRNA MIMAT0005439 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID01055875 mmu-miR-20b-5p miRNA MIMAT0003187 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01079177 mmu-miR-496a-3p miRNA MIMAT0003738 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01082108 mmu-let-7a-5p miRNA MIMAT0000521 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01173983 mmu-miR-138-2-3p miRNA MIMAT0016987 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01180319 mmu-miR-106b-5p miRNA MIMAT0000386 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01222718 mmu-miR-489-3p miRNA MIMAT0003112 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID01222756 mmu-let-7i-5p miRNA MIMAT0000122 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01268971 mmu-miR-181b-5p miRNA MIMAT0000673 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01293502 mmu-miR-1964-5p miRNA MIMAT0017349 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01374030 mmu-miR-743b-3p miRNA MIMAT0004840 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01385915 mmu-miR-488-3p miRNA MIMAT0003450 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01416346 mmu-miR-155-5p miRNA MIMAT0000165 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6478 Ubqln1 RAID01471182 mmu-miR-27a-3p miRNA MIMAT0000537 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID01486795 mmu-miR-206-3p miRNA MIMAT0000239 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01530089 mmu-miR-3618-3p miRNA MIMAT0035717 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01600583 mmu-miR-7647-5p miRNA MIMAT0029796 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01646707 mmu-miR-19a-3p miRNA MIMAT0000651 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01692414 mmu-miR-381-3p miRNA MIMAT0000746 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01806568 mmu-miR-3968 miRNA MIMAT0019352 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01824094 mmu-miR-190b-5p miRNA MIMAT0004852 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01880966 mmu-miR-202-3p miRNA MIMAT0000235 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01941827 mmu-miR-451a miRNA MIMAT0001632 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01953880 mmu-miR-340-5p miRNA MIMAT0004651 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01969497 mmu-let-7g-3p miRNA MIMAT0004519 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID01979878 mmu-miR-425-5p miRNA MIMAT0004750 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02006381 mmu-let-7f-5p miRNA MIMAT0000525 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02043021 mmu-let-7g-5p miRNA MIMAT0000121 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02079163 mmu-miR-7078-3p miRNA MIMAT0028063 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02226766 mmu-miR-365-3p miRNA MIMAT0000711 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID02293818 mmu-miR-148b-3p miRNA MIMAT0000580 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID02302665 mmu-miR-17-5p miRNA MIMAT0000649 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02330379 mmu-miR-494-3p miRNA MIMAT0003182 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6478 Ubqln1 RAID02336883 mmu-miR-222-3p miRNA MIMAT0000670 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID02350515 mmu-let-7a-1-3p miRNA MIMAT0004620 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID02364164 mmu-mir-325 miRNA MI0000597 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02365782 mmu-miR-210-3p miRNA MIMAT0000658 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02419735 mmu-miR-7033-3p miRNA MIMAT0027971 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02428331 mmu-miR-224-5p miRNA MIMAT0000671 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6478 Ubqln1 RAID02459747 mmu-miR-143-3p miRNA MIMAT0000247 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02532985 mmu-miR-190a-5p miRNA MIMAT0000220 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02607849 mmu-miR-377-3p miRNA MIMAT0000741 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02625109 mmu-miR-29c-3p miRNA MIMAT0000536 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02629999 mmu-miR-204-5p miRNA MIMAT0000237 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02682349 mmu-miR-200b-5p miRNA MIMAT0004545 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02714780 mmu-miR-101a-3p miRNA MIMAT0000133 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02716116 mmu-miR-93-5p miRNA MIMAT0000540 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02739720 mmu-miR-883a-5p miRNA MIMAT0004848 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02804816 mmu-miR-152-3p miRNA MIMAT0000162 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID02808134 mmu-miR-590-3p miRNA MIMAT0004896 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02810765 mmu-miR-3090-3p miRNA MIMAT0014902 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02841659 mmu-miR-181d-5p miRNA MIMAT0004324 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02873354 mmu-miR-374b-5p miRNA MIMAT0003727 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02901881 mmu-miR-493-5p miRNA MIMAT0017276 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID02926847 mmu-miR-192-5p miRNA MIMAT0000517 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02948619 mmu-miR-181a-5p miRNA MIMAT0000210 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID02995713 mmu-miR-20a-5p miRNA MIMAT0000529 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03027077 mmu-let-7b-5p miRNA MIMAT0000522 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03042759 mmu-miR-7651-3p miRNA MIMAT0029805 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03106785 mmu-miR-486a-5p miRNA MIMAT0003130 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03167812 mmu-miR-215-5p miRNA MIMAT0000904 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03179813 mmu-let-7f-1-3p miRNA MIMAT0004623 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID03204821 mmu-miR-181c-5p miRNA MIMAT0000674 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03217731 mmu-miR-21a-3p miRNA MIMAT0004628 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03253402 mmu-miR-296-3p miRNA MIMAT0004576 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID03270510 mmu-miR-92a-3p miRNA MIMAT0000539 Ubqln1 mRNA 56085 CLIP-seq 0.5483 Ubqln1 RAID03284587 mmu-miR-221-3p miRNA MIMAT0000669 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID03308886 mmu-let-7d-5p miRNA MIMAT0000383 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03331943 mmu-miR-106a-5p miRNA MIMAT0000385 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03392568 mmu-miR-200a-5p miRNA MIMAT0004619 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03395885 mmu-miR-98-3p miRNA MIMAT0017023 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID03433987 mmu-miR-29a-3p miRNA MIMAT0000535 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03448342 mmu-miR-450a-2-3p miRNA MIMAT0004789 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03458552 mmu-miR-18a-5p miRNA MIMAT0000528 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID03468370 mmu-miR-448-3p miRNA MIMAT0001533 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID03478329 mmu-miR-6985-5p miRNA MIMAT0027872 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03633935 mmu-miR-200b-3p miRNA MIMAT0000233 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID03665444 mmu-miR-743a-3p miRNA MIMAT0004238 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03668289 mmu-let-7b-3p miRNA MIMAT0004621 Ubqln1 mRNA 56085 Prediction 0.2202 Ubqln1 RAID03670049 mmu-miR-125a-3p miRNA MIMAT0004528 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID03749132 mmu-miR-543-3p miRNA MIMAT0003168 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03812541 mmu-miR-1948-3p miRNA MIMAT0009415 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03849457 mmu-miR-29b-3p miRNA MIMAT0000127 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03944704 mmu-miR-320-3p miRNA MIMAT0000666 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03953701 mmu-miR-23a-3p miRNA MIMAT0000532 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID03996191 mmu-miR-211-5p miRNA MIMAT0000668 Ubqln1 mRNA 56085 Prediction 0.1828 Ubqln1 RAID04027219 mmu-miR-27b-3p miRNA MIMAT0000126 Ubqln1 mRNA 56085 CLIP-seq//Prediction 0.6308 Ubqln1 RAID04376758 Gm2694 lncRNA 100040294 Ubqln1 protein 56085 Microarray//RNA-seq 0.6606