SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3674322 | snp | C/T | 0.42 | 0.183303 | intron-variant | Gga3 | GRCm38.p3 | 11:115594796 | CCTGGTAGACAAGCA[C/T]ACTACAATCAGTCTG | 260302 |
rs3675425 | snp | C/T | 0.408163 | 0.193609 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604424 | CTTAGTACCCTGTCC[C/T]ATGCCTGACAGGCCG | 260302 |
rs3675429 | snp | A/C | 0.408163 | 0.193609 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604425 | TTAGTACCCTGTCCT[A/C]TGCCTGACAGGCCGG | 260302 |
rs13464202 | snp | A/C | 0.497041 | 0.0383476 | utr-variant-3-prime, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115584913 | CTGCCACTCTGCATC[A/C]TGCTTTGGTCACTCC | 260302 |
rs27016061 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115601953 | CTGAATGTGCCAAGC[A/G]GGCCTCGAGAGAGAG | 260302 |
rs27016062 | snp | C/T | 0.484429 | 0.0868505 | intron-variant | Gga3 | GRCm38.p3 | 11:115601477 | ACTTAGAATCTTTAC[C/T]GCCTCAATTTCTATC | 260302 |
rs27016063 | snp | A/G | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115600827 | TTCTCTCACATCATC[A/G]TATCACCTGCACACA | 260302 |
rs27016064 | snp | C/T | 0.459184 | 0.136902 | intron-variant | Gga3 | GRCm38.p3 | 11:115600514 | TTCCCTTTCCTTACC[C/T]GTTCCTGAGTTCACC | 260302 |
rs27016065 | snp | C/T | 0.42 | 0.183303 | intron-variant | Gga3 | GRCm38.p3 | 11:115599907 | AGCACGTCACGCACT[C/T]CACAGTCTCCCTCAG | 260302 |
rs27016066 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115599784 | CAAAATACAACTGGG[C/T]AGACAGAGTGCAGCG | 260302 |
rs27016067 | snp | C/T | 0.152778 | 0.230321 | intron-variant | Gga3 | Mm_Celera | 11:115596938 | CCTGCTAACATTATA[C/T]GGGCTAACCTAAGTT | 260302 |
rs27031368 | snp | A/G | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115596751 | GCTACATTTGTTCAG[A/G]CCTTCTCTGTTACTC | 260302 |
rs27031369 | snp | C/T | 0.46281 | 0.131194 | intron-variant | Gga3 | Mm_Celera | 11:115596572 | ACATGCACTCAGATG[C/T]AGTGAAACGGCTTCC | 260302 |
rs27031370 | snp | G/T | 0.408163 | 0.193609 | intron-variant | Gga3 | Mm_Celera | 11:115596421 | ACAACAAGTGTCTCC[G/T]AGAAGCTGAAGATAG | 260302 |
rs27031371 | snp | A/T | 0.124444 | 0.216185 | intron-variant | Gga3 | Mm_Celera | 11:115594305 | GCTGCCGGCGTCCTC[A/T]CCACTTGGCTGTTGT | 260302 |
rs27031372 | snp | C/T | 0.18 | 0.24 | intron-variant, upstream-variant-2KB | Gga3 | Mm_Celera | 11:115593001 | AATGCTGAGTTCAGA[C/T]ACCAGGAAGTTTGCT | 260302 |
rs27031373 | snp | A/G | 0.165289 | 0.235211 | intron-variant, upstream-variant-2KB | Gga3 | Mm_Celera | 11:115592535 | GCCTCCAGCACCTGC[A/G]GCCACAGAAAGAGGC | 260302 |
rs27031374 | snp | G/T | 0.132653 | 0.220748 | intron-variant, upstream-variant-2KB | Gga3 | Mm_Celera | 11:115592305 | TGCCTAGACCTCAAC[G/T]GAGTCAGCCTCTAGG | 260302 |
rs27031375 | snp | A/G | 0.432133 | 0.171253 | intron-variant, upstream-variant-2KB | Gga3 | GRCm38.p3 | 11:115591598 | TCCACCTTCACTGCC[A/G]TGCTGAGGTCAATGG | 260302 |
rs27031376 | snp | A/G | 0.432133 | 0.171253 | synonymous-codon, utr-variant-5-prime, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115590932 | GGCCTCTTGCAGGTC[A/G]TCTGGGTTCTTGCTC | 260302 |
rs27031377 | snp | A/G | 0.432133 | 0.171253 | synonymous-codon, utr-variant-5-prime, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115590501 | CTCCAGTGTGTGTAG[A/G]CGCTTGGTCACTTTC | 260302 |
rs27031378 | snp | A/G | 0.498615 | 0.0262793 | intron-variant | Gga3 | GRCm38.p3 | 11:115590357 | GACCCCACTGGGGCG[A/G]AGCGGTCTCAGCAGC | 260302 |
rs27031379 | snp | A/G | 0.455 | 0.143091 | intron-variant | Gga3 | GRCm38.p3 | 11:115590192 | CCAAAGCTTAAAGGC[A/G]TGAGCATGGAGCACA | 260302 |
rs27031380 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Gga3 | Mm_Celera | 11:115589613 | TTTATGCCCAGAAAA[C/T]GGTAGGACTCCCCAA | 260302 |
rs27031381 | snp | A/G | 0.455 | 0.143091 | synonymous-codon, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115589091 | CTGTCTCGCTGGCTA[A/G]TTTAAACAGCGTCCG | 260302 |
rs27031382 | snp | A/G | 0.132653 | 0.220748 | intron-variant | Gga3 | Mm_Celera | 11:115589026 | AACTCTCACACAGCT[A/G]AAGTTTTGACTCATC | 260302 |
rs27031383 | snp | A/G | 0.18 | 0.24 | intron-variant | Gga3 | Mm_Celera | 11:115588812 | CAGTGGTCAGGGCAC[A/G]TGGCTGCTCTGGAGG | 260302 |
rs27031384 | snp | C/T | 0.124444 | 0.216185 | intron-variant | Gga3 | Mm_Celera | 11:115588601 | GAATCTGTGTCCATG[C/T]CGCAAGAGGCAGGAC | 260302 |
rs27031385 | snp | A/G | 0.444444 | 0.157135 | intron-variant, synonymous-codon, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115588532 | GGCGCCTTGGTTACC[A/G]CAGTGACTGTTTCCT | 260302 |
rs27031386 | snp | A/G | 0.124444 | 0.216185 | utr-variant-3-prime, nc-transcript-variant | Gga3 | Mm_Celera | 11:115584625 | GTAGACTAGTATGGC[A/G]GCCGAGTTCCCGATC | 260302 |
rs27031387 | snp | A/C/G | 0.124444 | 0.216185 | intron-variant, utr-variant-3-prime, nc-transcript-variant | Nup85, Gga3 | Mm_Celera | 11:115584407 | GACAGTGATCCCATA[A/C/G]ATGTTCCAGCACCGA | 260302 |
rs27031388 | snp | A/G | 0.493827 | 0.0552116 | downstream-variant-500B | Nup85, Gga3 | GRCm38.p3 | 11:115584106 | ATTAATCCTGCCCAG[A/G]TGAGGTTGAGGCCTT | 260302 |
rs27031389 | snp | G/T | 0.444444 | 0.157135 | downstream-variant-500B | Nup85, Gga3 | GRCm38.p3 | 11:115583964 | TTCTGAACCTGACAT[G/T]GCAAAATGAACAATA | 260302 |
rs29385898 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115599692 | CCACTAAGCCATCTC[A/G]CCAGCCCTCGCTCAG | 260302 |
rs29386656 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Gga3 | Mm_Celera | 11:115593836 | AAAACTGTCCCCTGC[A/G]AGCCAGCCATCGTGG | 260302 |
rs29387315 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | Mm_Celera | 11:115603331 | GTGTGTGTGTGTGCG[C/T]GCATGTGTGTTCCTT | 260302 |
rs29389603 | snp | A/G | 0.444444 | 0.157135 | downstream-variant-500B | Nup85, Gga3 | GRCm38.p3 | 11:115584047 | GAATAGCCCTGCTCC[A/G]TCTCATTAGAGAAGC | 260302 |
rs29391349 | snp | C/T | 0.5 | 0 | utr-variant-3-prime, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115584482 | TGAAAATGATTATCT[C/T]TTTTAAACCTGTCCT | 260302 |
rs29392478 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115597250 | AATCACCATTTGGCT[C/T]TGCAGTGGTAGTGCA | 260302 |
rs29398674 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Gga3 | Mm_Celera | 11:115595322 | CACTGGTTAAGATAC[A/T]GACTGCTCTTCCAGA | 260302 |
rs29399372 | snp | A/C | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3 | Mm_Celera | 11:115592934 | CCACAGGACCCCCCC[A/C]ACTCCCAATGGTGTG | 260302 |
rs29400773 | snp | A/G | 0.5 | 0 | downstream-variant-500B | Nup85, Gga3 | GRCm38.p3 | 11:115584212 | TAGTTGGAATTCATA[A/G]CATGGTGTCCCACCG | 260302 |
rs29404917 | snp | A/T | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604916 | CCCGGTCATCAGGTT[A/T]GGCGCAAATGCTCCT | 260302 |
rs29407171 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115586689 | TGGGACAGTGGTTAG[A/G]AACACTTATCATTCT | 260302 |
rs29408246 | snp | C/G | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604980 | TCTGCTGAGGGATCC[C/G]GAGTACAGCCCGGGA | 260302 |
rs29408879 | snp | G/T | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115589816 | GCATGTATGTTACGG[G/T]TGTATAGCTTGGTGT | 260302 |
rs29414355 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115589813 | ACTGCATGTATGTTA[C/T]GGTTGTATAGCTTGG | 260302 |
rs29417753 | snp | A/G | 0.48 | 0.0979796 | missense, nc-transcript-variant | Gga3 | GRCm38.p3 | 11:115587667 | GAGGGGCAGGAGGCC[A/G]CAGGCACTGGCCTGG | 260302 |
rs29419693 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115595141 | GCGCACACCTTTAAT[A/C]CCAGCACTTGGGAGG | 260302 |
rs29421091 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115597130 | GCTGAGCCACCTCAG[C/T]TCCACCCTCTTAGAG | 260302 |
rs29421308 | snp | A/C | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115602726 | GGATCTCAGTGAGTT[A/C]GAGGCCAGCCTGGTC | 260302 |
rs29422322 | snp | A/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115605381 | GAGCCAGAGGTAGGC[A/T]GATCTCTGAGTTCCA | 260302 |
rs29423081 | snp | A/G | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115602999 | CTCAAGACATCAAAG[A/G]GACAACTGTATTCCG | 260302 |
rs29423825 | snp | G/T | 0.48 | 0.0979796 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604377 | GGCGCCGAGATGGCT[G/T]ACTCCAGCCATTAAA | 260302 |
rs29424891 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115587361 | CCTCCCTTTGGTCCT[A/G]TATATACGACACCCC | 260302 |
rs29426682 | snp | C/T | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115596024 | TCAGCTCCTATACCA[C/T]GCCTGCCTGGGTGCT | 260302 |
rs29429030 | snp | A/G | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604685 | CACAGATTCACCCGT[A/G]GGGTTCTGTCTGCTT | 260302 |
rs29429407 | snp | A/C | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115599981 | GGCTCTGAACCACCC[A/C]TCTGGTCCTGCTCTG | 260302 |
rs29430465 | snp | G/T | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115603212 | ATTCCTTTGGAGCAA[G/T]GTACAAATTAGTAAA | 260302 |
rs29433820 | snp | C/T | 0.48 | 0.0979796 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115602298 | CACTGACTGGTTCAA[C/T]GGACTGGTATAAGTC | 260302 |
rs29440124 | snp | G/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115602615 | ATTAAGTGAGATACT[G/T]GGTCTACAATTCCAA | 260302 |
rs29442076 | snp | C/T | 0.32 | 0.24 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | Mm_Celera | 11:115603536 | GTCCCAGAGCACAGG[C/T]TGGGTGCAGCCCCAC | 260302 |
rs29442416 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115588018 | CCTAAGAACACAAAA[A/G]AAAAGTCAATGAGCT | 260302 |
rs29443212 | snp | A/C | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3 | GRCm38.p3 | 11:115592939 | GGACCCCCCCAACTC[A/C]CAATGGTGTGCTCTC | 260302 |
rs29444277 | snp | C/T | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115590850 | ATCTCTGGGGGAGAA[C/T]GTCTGTGCCTCCACC | 260302 |
rs29446943 | snp | C/T | 0.5 | 0 | intron-variant | Gga3 | Mm_Celera | 11:115596299 | AACAAAGAAACAAAA[C/T]AAAACACAAAGAGTT | 260302 |
rs29447269 | snp | G/T | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604915 | ACCCGGTCATCAGGT[G/T]TGGCGCAAATGCTCC | 260302 |
rs29447544 | snp | C/T | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115586805 | ACCTCTGTGGGCACA[C/T]GTCAAGCACATGCAT | 260302 |
rs29450384 | snp | A/C | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115586825 | AGCACATGCATACAC[A/C]AAGGCACACAAACAA | 260302 |
rs29450804 | snp | C/G | 0.375 | 0.216506 | intron-variant | Gga3 | Mm_Celera | 11:115596171 | TAATCCCAGCTCTTC[C/G]GAGGCAGAGGCAGAT | 260302 |
rs29451145 | snp | A/G | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115602703 | GCACTGGGGAGGCAG[A/G]GGCAGGAGGATCTCA | 260302 |
rs29451639 | snp | A/G | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115595981 | GCCAGTATTCTGCTA[A/G]CAGCCTTCAGATGAA | 260302 |
rs29457234 | snp | C/G | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115600092 | CACTGCTAGCCTCAA[C/G]TCCTACAGGACATCA | 260302 |
rs29464018 | snp | A/C | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115602809 | GCCTGTAATCCAGCA[A/C]TGTACACTCCCCAGA | 260302 |
rs29464131 | snp | A/G | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115594508 | CTCAGGGACCCCGTG[A/G]AGGCTCCATGGTAGC | 260302 |
rs29467849 | snp | A/C | 0.5 | 0 | intron-variant | Gga3 | Mm_Celera | 11:115599348 | AAAAGGGAAGAAGAC[A/C]CTGAGAGACCGGCCC | 260302 |
rs29468105 | snp | C/T | 0.5 | 0 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115605447 | GGTGGGGTGGGGGGA[C/T]AACCTAACAATAAAA | 260302 |
rs29468710 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Gga3 | Mm_Celera | 11:115595367 | ATCCCAGCAACCACA[A/T]GGTGGCTCATAACCA | 260302 |
rs29469017 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Gga3 | Mm_Celera | 11:115595408 | GATCTGGTGCCCTCT[G/T]CTGGAGTATATGAAG | 260302 |
rs29475762 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Gga3 | GRCm38.p3 | 11:115593847 | CTGCGAGCCAGCCAT[C/T]GTGGCACATGCCTGT | 260302 |
rs29477690 | snp | C/T | 0.444444 | 0.157135 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115605006 | CGGGAAAGCTAACCA[C/T]GTTTTTCTCCTTGAA | 260302 |
rs29478945 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Gga3 | GRCm38.p3 | 11:115589508 | CATGGAAGTGTAAGC[C/T]GAATAAACCCTTTCC | 260302 |
rs29482053 | snp | C/T | 0.5 | 0 | intron-variant, upstream-variant-2KB | Gga3 | Mm_Celera | 11:115592162 | CTTCTGAGAATGCCA[C/T]CAGCAGAACTGACTC | 260302 |
rs29486410 | snp | C/G | 0.48 | 0.0979796 | upstream-variant-2KB, intron-variant | Gga3, Mrps7 | GRCm38.p3 | 11:115604277 | GCCGGGACCGCCGCT[C/G]GGACCTTCACGGGAG | 260302 |
rs29486439 | snp | A/T | 0.5 | 0 | intron-variant | Gga3 | GRCm38.p3 | 11:115595950 | GCTTTAAGACCCTCA[A/T]GCTAGCTGCCTGGGA | 260302 |
rs33026552 | snp | G/T | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115603169 | TTACTAAATAACCTG[G/T]ATGAACTGTCCGCTA | 260302 |
rs33848672 | snp | C/T | 0.444444 | 0.157135 | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115603167 | CCTTACTAAATAACC[C/T]GGATGAACTGTCCGC | 260302 |
rs45716791 | snp | G/T | | | intron-variant | Gga3 | GRCm38.p3 | 11:115601060 | AATGACACTAATTCT[G/T]TATGTATCCCAGCTG | 260302 |
rs45734898 | snp | A/G | | | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | Mm_Celera | 11:115603314 | TGAGTGCGTGCATAT[A/G]TGTGTGTGTGTGTGC | 260302 |
rs46713682 | snp | A/G | | | intron-variant | Gga3 | GRCm38.p3 | 11:115601455 | ACATTTTAGTACTTA[A/G]GCTGCCACTTAGAAT | 260302 |
rs46856670 | snp | C/T | | | intron-variant | Gga3 | Mm_Celera | 11:115595343 | CTCTTCCAGAGGTCC[C/T]GAGTTCAAATCCCAG | 260302 |
rs47380357 | snp | A/C | | | intron-variant | Gga3 | GRCm38.p3 | 11:115601419 | CTCCACTTCCCTTTC[A/C]CCGGTTACCTAAGGA | 260302 |
rs47818339 | snp | A/G | | | intron-variant | Gga3 | Mm_Celera | 11:115599325 | GACAATAACAAAAAG[A/G]AAAAGAAAAAAGGGA | 260302 |
rs48502493 | snp | C/T | | | intron-variant | Gga3 | Mm_Celera | 11:115599056 | GGACAGCCACATCTA[C/T]ACAGAGAAACTCTCT | 260302 |
rs48623108 | snp | A/G | | | intron-variant | Gga3 | Mm_Celera | 11:115589958 | CTATAGCTTGTTATA[A/G]CATATTCCATTCATG | 260302 |
rs50372024 | snp | A/C | | | intron-variant | Gga3 | GRCm38.p3 | 11:115601436 | CGGTTACCTAAGGAA[A/C]CCTACATTTTAGTAC | 260302 |
rs51852760 | snp | A/G | | | upstream-variant-2KB | Gga3, Mrps7 | GRCm38.p3 | 11:115604012 | TCGGAGGCCGCGAGG[A/G]CGAGGATGTGTCTTC | 260302 |
rs211695724 | snp | C/T | | | intron-variant | Gga3 | Mm_Celera | 11:115590245 | TCACAGACAGTACTG[C/T]ACCAGGAGTGTCCGC | 260302 |
rs211766564 | snp | C/T | | | intron-variant, upstream-variant-2KB | Gga3, Mrps7 | Mm_Celera | 11:115603162 | TTAACCCTTACTAAA[C/T]AACCTGGATGAACTG | 260302 |
rs211964233 | snp | C/T | | | intron-variant | Gga3 | Mm_Celera | 11:115591166 | GGAGACTGCTCAAAA[C/T]TGAAAGACAAAAAGG | 260302 |