SNP - dbSNP |
dbSNP | Type | Alleles | Het | Se(het) | Fxn-class | Gene Name | Assembly | Chr-pos | Sequence | Entrez Gene |
rs3023346 | snp | C/T | 0.484877 | 0.0856314 | intron-variant | Trim9 | GRCm38.p3 | 12:70257972 | TGCTTCCTTCCTGCA[C/T]TCCACAGTATAAACA | 94090 |
rs3089042 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Trim9 | GRCm38.p3 | 12:70257941 | CAGAATGCACACTGC[A/G]GTCGTTGTATTTGTG | 94090 |
rs3687368 | snp | C/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70262358 | CTTTGCAGCTATTCC[C/G]TTAAGATTCTTGATA | 94090 |
rs3689845 | snp | A/G | 0.484429 | 0.0868505 | intron-variant | Trim9 | Mm_Celera | 12:70262731 | AGCATTAGGTGCACG[A/G]GAACTATTGCTTCAG | 94090 |
rs3695792 | snp | A/G | 0.489796 | 0.070696 | intron-variant, utr-variant-3-prime | Trim9 | Mm_Celera | 12:70266539 | AGGTTGTCAGTAGCT[A/G]ATTTGAGCGGTCTAT | 94090 |
rs3696480 | snp | C/T | 0.5 | 0 | intron-variant, utr-variant-3-prime | Trim9 | Mm_Celera | 12:70266677 | ACCACCTTCTGCTCC[C/T]AGGGGCAATGTGGCC | 94090 |
rs6189244 | snp | C/T | 0.489796 | 0.070696 | intron-variant, utr-variant-3-prime, nc-transcript-variant | Trim9 | Mm_Celera | 12:70266414 | TGTGGTACCGGGGAT[C/T]GCAGGTCCACATCTT | 94090 |
rs6327000 | snp | A/C | 0.207612 | 0.24638 | intron-variant | Trim9 | Mm_Celera | 12:70326171 | AGACCCAAACACACA[A/C]ATGAATATCAAATAC | 94090 |
rs6328631 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70326471 | GGGTTGTTATTCTAG[A/G]AGGAATGGGAATCAA | 94090 |
rs6351852 | snp | A/G | 0.489796 | 0.070696 | intron-variant | Trim9 | Mm_Celera | 12:70248963 | ACCCCCTGCAGAGAC[A/G]GCCACCTCTCATGAC | 94090 |
rs6352439 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Trim9 | Mm_Celera | 12:70249105 | ACCACAGGGCATCAG[C/T]TCTGCTCTGCACTTA | 94090 |
rs6353498 | snp | C/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70249305 | CACAATGACTTTGAA[C/T]GAAGACATTAGATTC | 94090 |
rs6366160 | snp | C/T | 0.290657 | 0.246672 | intron-variant | Trim9 | Mm_Celera | 12:70249322 | AAGACATTAGATTCT[C/T]TCTGTAAAATGACAG | 94090 |
rs6366288 | snp | A/C | 0.290657 | 0.246672 | intron-variant | Trim9 | Mm_Celera | 12:70249398 | TTCAGTGGTTTCCAG[A/C]GATCCNAGTATAAAC | 94090 |
rs6366304 | snp | A/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70249404 | GGTTTCCAGNGATCC[A/G]AGTATAAACACCACC | 94090 |
rs6366766 | snp | A/T | 0.304688 | 0.243945 | intron-variant | Trim9 | Mm_Celera | 12:70249451 | CTTTTGATGCAGCTG[A/T]TGACTGCAGAGCACC | 94090 |
rs13481517 | snp | A/G | 0.448558 | 0.151903 | synonymous-codon, upstream-variant-2KB, nc-transcript-variant | Trim9, Gm32151 | Mm_Celera | 12:70346836 | AGCCGGTGACAGGTG[A/G]GTGGGCGGTGGCGGC | 94090 |
rs29121461 | snp | A/C/G | 0.48 | 0.0979796 | intron-variant | Trim9 | GRCm38.p3 | 12:70331202 | ATCCCCAACAACATC[A/C/G]ATAGTCATCGGAGAC | 94090 |
rs29123104 | snp | C/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70279404 | TTTCTGTTTTGCTCT[C/T]GATATGGCCTCTTAC | 94090 |
rs29124418 | snp | A/G | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70262860 | GAGGGGGTGCCATGC[A/G]GGTGGACAATTGTTT | 94090 |
rs29125086 | snp | G/T | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70277105 | TCATTATTTCATAAT[G/T]GTCAGATTACATTAA | 94090 |
rs29125366 | snp | A/G | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70322612 | TGCATAGTTCAGAAT[A/G]TTTAGTAAATAATAA | 94090 |
rs29125466 | snp | G/T | 0.495 | 0.0497494 | intron-variant | Trim9 | Mm_Celera | 12:70258166 | ATTGCCATCTTTATC[G/T]GACAACCACTAGAGA | 94090 |
rs29125955 | snp | A/G | 0.487535 | 0.077957 | intron-variant, utr-variant-3-prime, nc-transcript-variant | Trim9 | Mm_Celera | 12:70267281 | GCTTGTAAAATAAAA[A/G]AACATTAACGCCTCA | 94090 |
rs29126673 | snp | A/T | 0.475309 | 0.108333 | upstream-variant-2KB, intron-variant | Trim9, Gm32151 | Mm_Celera | 12:70349655 | GAGTTTAACATTTTT[A/T]AAATTAATTTCTGTT | 94090 |
rs29126949 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70311521 | GCCAAGGCCAGCTCT[A/G]GGGATTCTCACCTCC | 94090 |
rs29127164 | snp | A/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70306773 | TGTGATTGCCTGTGC[A/G]CGCACACACACATGC | 94090 |
rs29127450 | snp | C/T | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70335998 | TGGAAAATGTTTTCC[C/T]ATTACATTCAAGAGC | 94090 |
rs29127518 | snp | C/T | 0.429688 | 0.173817 | intron-variant | Trim9 | Mm_Celera | 12:70313644 | TACATAACTCACTAT[C/T]GTAGGTGTAATTAGC | 94090 |
rs29127527 | snp | A/G | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70251853 | ATTGGGTGTAGAGAA[A/G]ATGAGGTTCTTATAC | 94090 |
rs29128535 | snp | C/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70297364 | GTTCCTGGAGGCTGG[C/T]GAGCCAGGGAATTGC | 94090 |
rs29129077 | snp | C/T | 0.48 | 0.0979796 | intron-variant | Trim9 | Mm_Celera | 12:70303424 | ACACAGTGTGACCAC[C/T]GCCTCCTGCCCTAGC | 94090 |
rs29129805 | snp | A/G | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70258740 | GCTGTCAGGACTGAT[A/G]GTTTCCTCTTATTCT | 94090 |
rs29130726 | snp | A/G | 0.465374 | 0.126941 | intron-variant | Trim9 | Mm_Celera | 12:70280878 | TTTCTGAAGCAAAGC[A/G]GAATATTTTTTTTTT | 94090 |
rs29130939 | snp | A/C | 0.444444 | 0.157135 | downstream-variant-500B | Trim9 | Mm_Celera | 12:70244063 | AGGACTCAGATGGAG[A/C]AGGCACTTTAGTGAC | 94090 |
rs29132418 | snp | A/C | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70280464 | ACTCTCACTCTGGAT[A/C]GTACAACCTTCATCA | 94090 |
rs29133337 | snp | A/C | 0.465374 | 0.126941 | intron-variant | Trim9 | Mm_Celera | 12:70256362 | CTACCGCAAGTTTTA[A/C]TACTGCAAGGAAGCA | 94090 |
rs29134173 | snp | A/T | 0.493827 | 0.0552116 | upstream-variant-2KB, intron-variant | Trim9, Gm32151 | Mm_Celera | 12:70349453 | TTGTCAGATTAGTGA[A/T]CTGAAGCTAAGAAAA | 94090 |
rs29134889 | snp | G/T | 0.475309 | 0.108333 | upstream-variant-2KB, intron-variant | Trim9, Gm32151 | Mm_Celera | 12:70349352 | GCTTTCCAGATGACT[G/T]CCGTTTGTTGGGAAG | 94090 |
rs29134949 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Trim9 | Mm_Celera | 12:70313645 | ACATAACTCACTATT[A/G]TAGGTGTAATTAGCC | 94090 |
rs29135175 | snp | A/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70345208 | CATCAAATGGTCATT[A/G]CAGTCTCCATCTGGG | 94090 |
rs29135277 | snp | C/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70334020 | TTCAAATAATCGTGT[C/T]CTGTACTAGGTACAC | 94090 |
rs29137702 | snp | A/T | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70277873 | AGGTGGATGGACCAG[A/T]CTCAGAAGGGCAGCG | 94090 |
rs29137897 | snp | A/C | 0.475309 | 0.108333 | upstream-variant-2KB, synonymous-codon, nc-transcript-variant | Trim9, Gm32151 | Mm_Celera | 12:70347939 | AGCTTTTTCCCTACC[A/C]GAGGCAAAGGCTCAG | 94090 |
rs29138196 | snp | A/C | 0.495 | 0.0497494 | intron-variant | Trim9 | Mm_Celera | 12:70281792 | CCTACACTCTGCGAT[A/C]TGGGCTATCTGGACC | 94090 |
rs29140714 | snp | A/G | 0.465374 | 0.126941 | intron-variant | Trim9 | Mm_Celera | 12:70334800 | CTGCAATGAAGACCT[A/G]TTTTAGGTAACCGCC | 94090 |
rs29141106 | snp | C/T | 0.444444 | 0.157135 | intron-variant, utr-variant-3-prime, downstream-variant-500B | Trim9 | Mm_Celera | 12:70265790 | GAATGAAATGTGCCC[C/T]TCTGAGACACAGACC | 94090 |
rs29141509 | snp | A/G | 0.484429 | 0.0868505 | intron-variant | Trim9 | Mm_Celera | 12:70340137 | TAGCAACAAGTAGCT[A/G]GTTTGTTGTTGACAC | 94090 |
rs29142803 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70284505 | ATTTATAATTTTATT[A/C]TTTAAAGAATAATGT | 94090 |
rs29145912 | snp | A/G | 0.444444 | 0.157135 | intron-variant, utr-variant-3-prime | Trim9 | Mm_Celera | 12:70265111 | GAATTACTTGCATAT[A/G]GGGTGGGAGAGCCAG | 94090 |
rs29146401 | snp | G/T | 0.493827 | 0.0552116 | intron-variant | Trim9 | Mm_Celera | 12:70247194 | TGGAAATCAGGTCCC[G/T]CTGGGCTGTAAGCAG | 94090 |
rs29146643 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70279291 | CGCCTGGCCTGGTTT[C/T]TTCAGCTTTCAAGTA | 94090 |
rs29146961 | snp | A/C | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70259032 | TGAGAGGCATGAAGC[A/C]GGCAGGGGAACTGAC | 94090 |
rs29147167 | snp | A/G | 0.497778 | 0.0332592 | intron-variant | Trim9 | Mm_Celera | 12:70301008 | AGCAGTCTGCTGCCT[A/G]ATACTGCTGGGAACA | 94090 |
rs29147254 | snp | A/G | 0.49827 | 0.0293608 | intron-variant | Trim9 | Mm_Celera | 12:70261136 | CAGATGGATGGAGGC[A/G]GATTCTGCTTAGACG | 94090 |
rs29147272 | snp | A/G | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70274227 | TTCCTTGGACTGTCT[A/G]TCTCATTAGCTCCAG | 94090 |
rs29149301 | snp | A/G | 0.484429 | 0.0868505 | intron-variant | Trim9 | Mm_Celera | 12:70313014 | GAAATGATCTTACAC[A/G]TCTTCTAAGCTTGCT | 94090 |
rs29149347 | snp | A/G | 0.455 | 0.143091 | intron-variant | Trim9 | Mm_Celera | 12:70343696 | TGGCCTGTGCCTAAC[A/G]GATATTTATTCACAG | 94090 |
rs29149674 | snp | A/G | 0.336735 | 0.234472 | intron-variant | Trim9 | Mm_Celera | 12:70339843 | GCAGGGTGCACCCAG[A/G]TTCTTACATATAAAC | 94090 |
rs29150284 | snp | C/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70311759 | TCATTGGCTCATTAC[C/T]GCAAACCCCAACATG | 94090 |
rs29150490 | snp | A/G/T | 0.49827 | 0.0293608 | intron-variant | Trim9 | GRCm38.p3 | 12:70280527 | CCCGCTGGGGACAGC[A/G/T]TGTTGACCCTGGAGA | 94090 |
rs29150577 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Trim9 | Mm_Celera | 12:70246942 | ACCTTCTTATCTGTA[C/T]CACCCCCATCAAGAG | 94090 |
rs29151006 | snp | C/G | 0.5 | 0 | intron-variant, utr-variant-3-prime, downstream-variant-500B | Trim9 | Mm_Celera | 12:70265898 | CAAACCACCCAGCCA[C/G]CCCAGCAAAACAACA | 94090 |
rs29151083 | snp | A/G | 0.48 | 0.0979796 | intron-variant | Trim9 | Mm_Celera | 12:70296049 | TGTGTCGGAGGGGTC[A/G]GAGGCTCTTGGTTTG | 94090 |
rs29151195 | snp | A/C | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70284478 | CTAGGGTCGCCCTCC[A/C]CAAAGTGTATTATTT | 94090 |
rs29151287 | snp | C/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70261250 | GCTCAGGTGGACTCT[C/G]GGGGGGAGGCTATGT | 94090 |
rs29152896 | snp | A/C | 0.484429 | 0.0868505 | intron-variant | Trim9 | Mm_Celera | 12:70277737 | GCACTGTGTGCACCG[A/C]TAAGCGAACACGTGA | 94090 |
rs29153014 | snp | G/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70342419 | TGAAAATATTTACCC[G/T]ATTTTTAAAAAAATA | 94090 |
rs29153514 | snp | A/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70344039 | CTCTGATATTGACTG[A/G]ACAAATTGAAATGGA | 94090 |
rs29153559 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70259517 | GTATGGCAGGCACAG[C/T]TTTGGAACTGAGCAG | 94090 |
rs29153772 | snp | G/T | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70345345 | AGGGAAGGTCCCGGG[G/T]GTTGGCTGAGGAACA | 94090 |
rs29154554 | snp | A/G | 0.498615 | 0.0262793 | intron-variant | Trim9 | Mm_Celera | 12:70328738 | CAGTGTAAGCAGAAT[A/G]TCCAGGCTCTATTCA | 94090 |
rs29154976 | snp | C/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70306540 | GGATGGCTAGTGGGA[C/G]GGTGCTGAACTAGCC | 94090 |
rs29156112 | snp | C/G | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70255416 | CCCCAGACCAGACAA[C/G]CATTCCAGCACCACT | 94090 |
rs29156968 | snp | A/G | 0.444444 | 0.157135 | intron-variant | Trim9 | Mm_Celera | 12:70247061 | AAAAACTTTGAACGA[A/G]GTTTTTCTTAGATTG | 94090 |
rs29158731 | snp | A/C | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70306130 | TAATGCAAAACAAAC[A/C]ACAGGAACAAAGAAA | 94090 |
rs29158975 | snp | A/G | 0.465374 | 0.126941 | intron-variant | Trim9 | Mm_Celera | 12:70343224 | GAACTGCTAAAAATC[A/G]CAAAGTGGTGCTGGC | 94090 |
rs29159206 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70277349 | TGTCTCAACTGCAGC[C/T]AGTCAACTGATATTG | 94090 |
rs29159488 | snp | C/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70263087 | CCCGTGTCATGCTTA[C/T]AGGCACGTGCCACGT | 94090 |
rs29159629 | snp | G/T | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70275013 | GAGACATCTTTGGTT[G/T]TCCCTTTATAATGGG | 94090 |
rs29159631 | snp | A/C | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70274490 | GAAACAAAAAAAAAA[A/C]CTTGGGGGGAAGAAA | 94090 |
rs29159635 | snp | A/G | 0.498615 | 0.0262793 | intron-variant | Trim9 | Mm_Celera | 12:70333265 | CAGCCTTAGCTTAGA[A/G]CGGCAGACTTTGCTA | 94090 |
rs29159969 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70297801 | AGTTGTTAACCCTGG[C/T]TGTGATCCAGGAAAA | 94090 |
rs29160631 | snp | A/C | 0.493827 | 0.0552116 | intron-variant | Trim9 | Mm_Celera | 12:70247886 | GGGGCTACTGCTTCC[A/C]AGCCCTGTTGCACAA | 94090 |
rs29160859 | snp | C/T | 0.475309 | 0.108333 | intron-variant | Trim9 | Mm_Celera | 12:70317332 | ACCGCTGCTCCATAC[C/T]CGGGAACTCAGAGCC | 94090 |
rs29160950 | snp | A/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70336043 | TTAGTACAACCTTAA[A/G]TTAAAGTGTCTAGTA | 94090 |
rs29161183 | snp | C/T | 0.495 | 0.0497494 | intron-variant | Trim9 | Mm_Celera | 12:70294857 | AACTATCTGATTTCT[C/T]ACATTTCAACCTTAA | 94090 |
rs29161253 | snp | C/T | 0.493827 | 0.0552116 | intron-variant, utr-variant-3-prime, nc-transcript-variant | Trim9 | Mm_Celera | 12:70267341 | CTTCTTCTAGACAGA[C/T]TGTCTCCAATGACCA | 94090 |
rs29161288 | snp | C/G | 0.5 | 0 | intron-variant | Trim9 | Mm_Celera | 12:70274611 | GGCATGTCTAAACTG[C/G]AACCTGTTGCTTATC | 94090 |
rs29161692 | snp | G/T | 0.459184 | 0.136902 | intron-variant | Trim9 | Mm_Celera | 12:70249612 | CACCACCACAGGCAA[G/T]CTTGCTATTTACAAG | 94090 |
rs29165312 | snp | C/T | 0.465374 | 0.126941 | intron-variant | Trim9 | Mm_Celera | 12:70338346 | TTAAGTAAATCTTTA[C/T]CTACCATCCGCTACA | 94090 |
rs29165878 | snp | G/T | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70277590 | AATGCCTAAAGGATT[G/T]TTCTGGATCTTCTAT | 94090 |
rs29169768 | snp | A/G | 0.455 | 0.143091 | intron-variant | Trim9 | Mm_Celera | 12:70343735 | TCAGCAGTAGAAATG[A/G]TTACTATCACAGAAT | 94090 |
rs29169825 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Trim9 | Mm_Celera | 12:70283649 | CCCATGAAACCAGGG[C/T]AAGCGTTGAGAGTTT | 94090 |
rs29169861 | snp | A/T | 0.48 | 0.0979796 | intron-variant | Trim9 | Mm_Celera | 12:70307537 | ATCCACCAAGGTGCC[A/T]CTTCACACCCACTAG | 94090 |
rs29170250 | snp | C/T | 0.493827 | 0.0552116 | intron-variant | Trim9 | Mm_Celera | 12:70267687 | AGCAAGCAAGAGCTA[C/T]AAAGACACGGAGAAT | 94090 |
rs29170906 | snp | C/T | 0.487535 | 0.077957 | intron-variant | Trim9 | Mm_Celera | 12:70297853 | AGTTCTTAAGGGCAC[C/T]TGAAGCATGTGTGAT | 94090 |
rs29171726 | snp | C/T | 0.375 | 0.216506 | intron-variant | Trim9 | Mm_Celera | 12:70316336 | ACAGCACTGAGCCTC[C/T]CCAGTTCTTATTTAT | 94090 |
rs29172292 | snp | A/C | 0.493827 | 0.0552116 | intron-variant | Trim9 | Mm_Celera | 12:70260945 | CTGGGGTGCTGGCCA[A/C]AGGAATAGGTGACTG | 94090 |
rs29173014 | snp | A/C | 0.455 | 0.143091 | intron-variant | Trim9 | Mm_Celera | 12:70338669 | AAATTTTTCAAGACC[A/C]AAAACACCGAAGAAT | 94090 |