DNA & RNA Element - RepTar |
Gene Name | miRNA | Begin | End | Profile |
Prpf19 | mmu-miR-881 | beg:381 | end:398 | pic:3' AGATAAGTCTTTTC--TGTGTCAA 5'& ||||| ||||||| &5' ---------AAAAGCTACACAGT- 3' |
Prpf19 | mmu-miR-378 | beg:220 | end:237 | pic:3' GGAAGACTGAGGTTCAGGTCA 5'& || || .||||||| &5' ------GAGTCGGAGTCCAG- 3' |
Prpf19 | mmu-miR-28star | beg:355 | end:372 | pic:3' AGGTCGTCGAGTGTTAGATCAC 5'& |||||| .||||||| &5' ---AGCAGC----GATCTAGT- 3' |
Prpf19 | mmu-miR-2141 | beg:229 | end:244 | pic:3' TTGAAAAGACTGTGGAGGA 5'& || .||||||| &5' ------TCCAGCACCTCC- 3' |
Prpf19 | mmu-miR-669h-5p | beg:166 | end:182 | pic:3' CGTGAGTTGATATG-TGGGTACGTA 5'& |.| |.||||||| &5' -----------TGCTATCCATGCA- 3' |
Prpf19 | mmu-miR-674star | beg:301 | end:321 | pic:3' AACAAGACTCTA--CCCTCGACAC 5'& ||| |||||||||| &5' -------GAGCCAAGGGAGCTGTG 3' |
Prpf19 | mmu-miR-673-5p | beg:304 | end:322 | pic:3' GAGGTTCCTGGTCTCGACACTC 5'& |||||| ||||||||| &5' --CCAAGG----GAGCTGTGA- 3' |
Prpf19 | mmu-miR-455star | beg:144 | end:163 | pic:3' GCTACATCAGGTTTCCGTGTAT 5'& || || || |.|||||||| &5' ---TG-AG-CC-AGGGCACATA 3' |
Prpf19 | mmu-miR-22 | beg:243 | end:260 | pic:3' TGTCAAGAAGTTGACCGTCGAA 5'& |||| . |||||||| &5' -CAGT------GGTGGCAGCT- 3' |
Prpf19 | mcmv-miR-M23-2 | beg:230 | end:248 | pic:3' GG-CGAACTGGCTCCGGGGGTA 5'& || || ||| |||||| &5' CCAGC---ACCT---CCCCCA- 3' |
Prpf19 | mghv-miR-M1-2 | beg:50 | end:75 | pic:3' TTTCTCCC-CCTCT-CCCCCAGAC 5'& |||||| ||.|. |||||| | &5' --AGAGGGTGGGGGTGGGGGTGGG 3' |
Prpf19 | mmu-miR-10a | beg:334 | end:352 | pic:3' GTGTTTAAGCCT-AG-ATGTCCCAT 5'& ||| || |.|||||| &5' ---------GGACTCTTGCAGGGT- 3' |
Prpf19 | mmu-miR-10b | beg:334 | end:352 | pic:3' GTGTTTAAGCCA-AG-ATGTCCCAT 5'& || || |.|||||| &5' ---------GGACTCTTGCAGGGT- 3' |
Prpf19 | mmu-miR-1196 | beg:80 | end:102 | pic:3' TCCGTCTCCGTCCAT-CTAAA 5'& ||| ||||| |||| |.|| &5' AGG-AGAGGGAGGTCTGGTT- 3' |
Prpf19 | mmu-miR-1198 | beg:140 | end:163 | pic:3' GGTTCGG--TCGGTCCTTGTGTAT 5'& .|.| ||||||| .|||||| &5' ---GGTCTGAGCCAGG-GCACATA 3' |
Prpf19 | mmu-miR-127star | beg:358 | end:376 | pic:3' TAGTCTCGGGAGACTCGAAGTC 5'& ||| ||| ||.|||| &5' -----AGCGATCT-AGTTTCA- 3' |
Prpf19 | mmu-miR-128 | beg:300 | end:322 | pic:3' TTTCTCTGG--CCAAGTGACACT 5'& .|.||| || || .|||||| &5' GAGGAG-CCAAGGGA-GCTGTGA 3' |
Prpf19 | mmu-miR-135astar | beg:194 | end:214 | pic:3' GCGGTGCCGAGGTTAGGGATAT 5'& | |||| || ||||.|| &5' -GGAACGG-TCA---CCCTGTA 3' |
Prpf19 | mmu-miR-143 | beg:15 | end:37 | pic:3' CTCGATGTCACGAAGTAGAGT 5'& ||.| .| || |||||||| &5' -AGTTCTGG-GCCTCATCTCA 3' |
Prpf19 | mmu-miR-145star | beg:190 | end:200 | pic:3' GTTCTTGTCATAAAGGTCCTTA 5'& |||||.| &5' --------------CCAGGGA- 3' |
Prpf19 | mmu-miR-149 | beg:134 | end:155 | pic:3' CCCTCACT-TCTGTGCCTCGGTCT 5'& ||| ||| .| | |||||||. &5' -GGA-TGATGGTCT--GAGCCAGG 3' |
Prpf19 | mmu-miR-1894-5p | beg:308 | end:331 | pic:3' TCTC-CGTCCACCATCCCCTCTC 5'& ||.| || ||| |||||||.| &5' AGGGAGCT-GTGA-AGGGGAGGG 3' |
Prpf19 | mmu-miR-1894-5p | beg:83 | end:110 | pic:3' TCTCCGTCCA--CCATCCCCTCTC 5'& ||||| |||| ||| ||||.|.| &5' AGAGGGAGGTCTGGTTGGGGGGGG 3' |
Prpf19 | mmu-miR-18astar | beg:317 | end:335 | pic:3' GTCTTCCTCGTGAATCCCGTCA 5'& |||||.| .|||||| &5' --GAAGGGGA----GGGGCAG- 3' |
Prpf19 | mmu-miR-1902 | beg:221 | end:243 | pic:3' TTCAGTA-CGGATGACGTGGAGA 5'& .||||. |.| ||||||| &5' GAGTCGGAGTCCA--GCACCTC- 3' |
Prpf19 | mmu-miR-1904 | beg:322 | end:337 | pic:3' GGAGGGAGGTCTCCTCGTCTTG 5'& .||||.||||.| &5' ---------GGAGGGGCAGGA- 3' |
Prpf19 | mmu-miR-1931 | beg:167 | end:189 | pic:3' CGGTAGCGTG-GTCGGGAACGTA 5'& ||.||| ||. |||||.||| &5' GCTATC-CATGCAGCCTTTG--- 3' |
Prpf19 | mmu-miR-1934 | beg:319 | end:342 | pic:3' TCTCCTGCTTCGTCC-CCTGGTCT 5'& ||.||| |..||||| ||||. &5' AGGGGA-GGGGCAGGAGGACT--- 3' |
Prpf19 | mmu-miR-1952 | beg:52 | end:71 | pic:3' GTCTTCC--TCCCACCTCT 5'& |||.|| .||||||.|. &5' -AGAGGGTGGGGGTGGGGG 3' |
Prpf19 | mmu-miR-1952 | beg:76 | end:94 | pic:3' GTCTTCCTCCCACCTCT 5'& .||.||||| | ||||. &5' TAGGAGGAGAG-GGAGG 3' |
Prpf19 | mmu-miR-1962 | beg:171 | end:188 | pic:3' TACACAGGGTCACGGTCGGAGA 5'& .||| || ||||||.| &5' ------TCCA-TG-CAGCCTTT 3' |
Prpf19 | mmu-miR-1971 | beg:171 | end:188 | pic:3' AGAGTCGGGTCGGAAATG 5'& || || . ||||||||. &5' TC-CA-TGCAGCCTTTG- 3' |
Prpf19 | mmu-miR-1982.1 | beg:37 | end:64 | pic:3' GACACCC--TCTTGTA-TCCCACTCT 5'& ||||| |||. ||||||.|. &5' --GTGGGTTAGAGTTAGAGGGTGGGG 3' |
Prpf19 | mmu-miR-1982.1 | beg:55 | end:76 | pic:3' GACACCCTCTTGTATCCCACTCT 5'& |||||.| .|||||.|| &5' --GTGGGGGTG---GGGGTGGGA 3' |
Prpf19 | mmu-miR-1982.2 | beg:313 | end:340 | pic:3' GACAC--CCTCTTGTA-TCCCACT 5'& ||||| ||.||. . ||| || &5' CTGTGAAGGGGAGGGGCAGGAGGA 3' |
Prpf19 | mmu-miR-204 | beg:76 | end:94 | pic:3' TCCGTATCCTACTGTTTCCCTT 5'& ||||| |. |.|||||. &5' -----TAGGA-GG-AGAGGGAG 3' |
Prpf19 | mmu-miR-205 | beg:308 | end:326 | pic:3' GTCTGAGGCCACCT-TACTTCCT 5'& || | .||||||. &5' --------GGGAGCTGTGAAGGG 3' |
Prpf19 | mmu-miR-207 | beg:292 | end:317 | pic:3' CTCCCTCCT-CTCGGTCCTCTTCG 5'& |||||||| |||||| .|.||| &5' -AGGGAGGAGGAGCCAA-GGGAGC 3' |
Prpf19 | mmu-miR-211 | beg:307 | end:328 | pic:3' TCCGTTTCCTAC-TGTTTCCCTT 5'& |||.||| . |||||.| &5' ---CAAGGGAGCTGTGAAGGGGA 3' |
Prpf19 | mmu-miR-2183 | beg:57 | end:72 | pic:3' TCCTCCAGTCCCCAAGTT 5'& ||.||| .||||| &5' -GGGGGT-GGGGGT---- 3' |
Prpf19 | mmu-miR-24 | beg:8 | end:29 | pic:3' GACAAGGACGA----CTTGACTCGGT 5'& ||| || | |||.||| &5' -----CCTTCTCACAGTTCTGGGCC- 3' |
Prpf19 | mmu-miR-24 | beg:130 | end:154 | pic:3' GACAAGGACG-ACTT---GACTCGGT 5'& .||| ||| |||||||| &5' -----TCTGGATGATGGTCTGAGCCA 3' |
Prpf19 | mmu-miR-27a | beg:300 | end:323 | pic:3' CGCCTTGAA-TCGGTGACACTT 5'& |||.| .| .||||||| &5' --GGAGCCAAGGGAGCTGTGAA 3' |
Prpf19 | mmu-miR-27astar | beg:166 | end:194 | pic:3' ACGAGT-GTTCGTCG---ATTCGGGA 5'& |||| || ||||| |..|||| &5' TGCTATCCATGCAGCCTTTGGGCCC- 3' |
Prpf19 | mmu-miR-3072 | beg:87 | end:113 | pic:3' TCTTCC-GAAGGACCTCCCCC-GT 5'& .|.||| || .|||.||||| || &5' GGGAGGTCTGGTTGGGGGGGGACA 3' |
Prpf19 | mmu-miR-3099star | beg:291 | end:319 | pic:3' GTTCC-CGACCT----TCCTTCGACC 5'& ||.|| | ||| |||.||||| &5' CAGGGAGGAGGAGCCAAGGGAGCTG- 3' |
Prpf19 | mmu-miR-30bstar | beg:16 | end:38 | pic:3' CTGCATTTGTAGGTGTAGGGTC 5'& || || ||||.||| &5' ---GTTCTGGGCCTCATCTCAG 3' |
Prpf19 | mmu-miR-326 | beg:206 | end:226 | pic:3' TGACCTCCTTCCCGGGTCTCC 5'& ||| ||| ||.||||| &5' -CTGTA--AAGTGCTCAGAG- 3' |
Prpf19 | mmu-miR-330 | beg:179 | end:200 | pic:3' CGGATTCTGTGTCC-GGGTCTCT 5'& |||| ..|| |||||.|| &5' GCCTT-----TGGGCCCCAGGGA 3' |
Prpf19 | mmu-miR-330 | beg:205 | end:226 | pic:3' CGGATTCTGTGTC-CGGGTCTCT 5'& |||. || ||.||||| &5' -CCTGTAA---AGTGCTCAGAG- 3' |
Prpf19 | mmu-miR-331-5p | beg:255 | end:272 | pic:3' CCTAGGGACCCTGGTATGGATC 5'& ||| ||||.|||. &5' ------CTGTT-CCATGCCTG- 3' |
Prpf19 | mmu-miR-33star | beg:153 | end:171 | pic:3' CACTACGTGACACCTTTGTAAC 5'& |||| .||||||| &5' -----GCACATA--GAACATTG 3' |
Prpf19 | mmu-miR-342-5p | beg:221 | end:243 | pic:3' GAGTTAGTGTCTA-TCGTGGGGA 5'& |.||. || ||||||.| &5' ---AGTCGGAGTCCAGCACCTC- 3' |
Prpf19 | mmu-miR-374star | beg:162 | end:185 | pic:3' GAGCCTGTTACTAT---TATGTTGG 5'& | ||| || || ||.||.|| &5' ---GAACATTGCTATCCATGCAGCC 3' |
Prpf19 | mmu-miR-450b-5p | beg:199 | end:216 | pic:3' ATAAGTCCTTGTATGACGTTTT 5'& || || |||.|||. &5' ------GGT-CACCCTGTAAAG 3' |
Prpf19 | mmu-miR-468 | beg:103 | end:128 | pic:3' GTCTGTGTGCGTGTAGTC-AGTAT 5'& .|. |||. ||||||| |||| &5' -GGGGACATTCACATCATTTCAT- 3' |
Prpf19 | mmu-miR-483star | beg:50 | end:74 | pic:3' TTCTGCCCTCCCC-TCCTCACT 5'& ||| || |||| .||.|||. &5' -AGAGGGTGGGGGTGGGGGTGG 3' |
Prpf19 | mmu-miR-496 | beg:204 | end:223 | pic:3' CTCTAACCGGTACAT--TATGAGT 5'& || |||| .|.|||| &5' --------CCCTGTAAAGTGCTCA 3' |
Prpf19 | mmu-miR-666-5p | beg:257 | end:274 | pic:3' CCGAGAGTGTCGACACGGGCGA 5'& |.|| || ||||.||| &5' -GTTC-CA------TGCCTGCT 3' |
Prpf19 | mmu-miR-670 | beg:179 | end:200 | pic:3' AAGTGGTGTATGTGA-GTCCCTA 5'& .|| |. .| |||||| &5' ---GCCTT-TGGGCCCCAGGGA- 3' |
Prpf19 | mmu-miR-679 | beg:0 | end:23 | pic:3' TGGTTCTCAGTGGAGTGTCAGG 5'& .|| .||||||||.| &5' GCCCTATGCCTTCTCACAGTTC 3' |
Prpf19 | mmu-miR-702 | beg:53 | end:75 | pic:3' CTCGCCCCATTTCCCACCCGT 5'& |.|.|||| ..||||||| &5' GGGTGGGGGTGGGGGTGGG-- 3' |
Prpf19 | mmu-miR-703 | beg:337 | end:355 | pic:3' AAGAAAGGAAGAC-TTCCAAAA 5'& || || |.|||||| &5' -------CTCTTGCAGGGTTTT 3' |
Prpf19 | mmu-miR-708star | beg:354 | end:373 | pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |||| .|. ||||||| &5' ----AAGCA-GCGATCTAGTT- 3' |
Prpf19 | mmu-miR-708star | beg:83 | end:103 | pic:3' GATCTTCGAGTGTCAGATCAAC 5'& |.|| .||||.|||| &5' ---GGAGAGGGAGGTCTGGTTG 3' |
Prpf19 | mmu-miR-760 | beg:8 | end:29 | pic:3' AGGGGTGTCTGGGTCTCGGC 5'& |.|.||||| | | ||| &5' TTCTCACAGTTCTGG-GCC- 3' |
Prpf19 | mmu-miR-760 | beg:204 | end:228 | pic:3' AGGGGTGTC---TGGGTCTCGGC 5'& ||| .| .|.|||||.|| &5' -CCCTGTAAAGTGCTCAGAGTCG 3' |
Prpf19 | mmu-miR-764-5p | beg:321 | end:342 | pic:3' TCCT-CCTGTACACTCGTGG 5'& .||| ||.|| ||| ||. &5' GGGAGGGGCAG--GAGGACT 3' |
Prpf19 | mmu-miR-764-5p | beg:296 | end:317 | pic:3' TCCTCCT--GTACACTCGTGG 5'& ||||||| || | |||| &5' AGGAGGAGCCAAGGGAGC--- 3' |
Prpf19 | mmu-miR-764-5p | beg:101 | end:121 | pic:3' TCCTCCTGTACACTCGTGG 5'& .||.|||||| ||.| &5' GGGGGGACATTCA--CATC 3' |
Prpf19 | mmu-miR-804 | beg:97 | end:119 | pic:3' AGGTCCACTCCTTGTTGAGTGT 5'& . || |.||.|| |.||||| &5' -TTGGG-GGGGGAC-ATTCACA 3' |
Prpf19 | mmu-miR-874 | beg:139 | end:159 | pic:3' AGCCAGGGAGCCCGGTCCCGTC 5'& .||||. | ||||||||| &5' -TGGTCT---GAGCCAGGGCA- 3' |
Prpf19 | mmu-miR-876-5p | beg:212 | end:236 | pic:3' ATCACTAAGTGTCT-CTTTAGGT 5'& |||| ||| || |.|.|||| &5' -AGTGC-TCAGAGTCGGAGTCCA 3' |
Prpf19 | mmu-miR-877star | beg:320 | end:341 | pic:3' ACCCTCCTCCCTCTTCTCCTGT 5'& |.||||||. |.|||||| &5' ---GGGGAGGGGCAGGAGGAC- 3' |
Prpf19 | mmu-miR-883a-5p | beg:23 | end:40 | pic:3' CATTGACGATGAAGAGAGTCGT 5'& || || ||||||.| &5' ------GC--CTCATCTCAGTA 3' |
Prpf19 | mmu-miR-883b-5p | beg:19 | end:40 | pic:3' ACTGACGATGGGTAAGAGTCAT 5'& ||| .||. |||||||| &5' ---CTGG-GCCTCATCTCAGTA 3' |