DNA & RNA Element - microRNA |
Mirbase Acc | miRNA Name | Gene ID | Gene Symbol | miRNA Alignment | Alignment | Gene Alignment | miRNA Start | miRNA End | Gene Start | Gene End | Genome Coordinates | Conservation | Align Score | Seed Cat | Energy | mirSVR Score |
MIMAT0004524 | mmu-miR-30b* | 319651 | Usp37 | cugcAUUUGUAGGUGUA-GGGUc | || |:|| :|||| |||| | uaaaUAUAUAUGUACAUACCCAc | 2 | 19 | 257 | 279 | [mm9:1:74485686-74485708:-] | 0.6000 | 130 | 0 | -14.54 | -1.1290 |
MIMAT0000375 | mmu-miR-297a | 319651 | Usp37 | uguacgugUACGUGUGUAUGua | ||| |:|||||| | ucuuaggaAUGAAUACAUACug | 3 | 15 | 235 | 256 | [mm9:1:74485709-74485730:-] | 0.6108 | 138 | 0 | -11.41 | -0.1391 |
MIMAT0000376 | mmu-miR-298 | 319651 | Usp37 | cccuucuuguCGGGAGGAGACGg | | | |||||||| | cacccuccuuGACGUCCUCUGCc | 2 | 14 | 46 | 68 | [mm9:1:74485897-74485919:-] | 0.6556 | 149 | 7 | -21.88 | -0.3510 |
MIMAT0004622 | mmu-let-7c-1* | 319651 | Usp37 | ccuuucgaucuuccaACAUGUc | |||||| | uacuguaaauauauaUGUACAu | 2 | 8 | 252 | 273 | [mm9:1:74485692-74485713:-] | 0.6108 | 120 | 6 | -4.99 | -0.1298 |
MIMAT0004625 | mmu-miR-16* | 319651 | Usp37 | agucgucgugucaguUAUGACc | |||||| | cuuaggaaugaauacAUACUGu | 2 | 8 | 236 | 257 | [mm9:1:74485708-74485729:-] | 0.6108 | 120 | 6 | -8.06 | -0.2542 |
MIMAT0004628 | mmu-miR-21* | 319651 | Usp37 | cuGUCGGGUAGCUGACGACAAc | || | | || | ||||||| | ugCAACGC-UCCA-UGCUGUUu | 2 | 21 | 145 | 164 | [mm9:1:74485801-74485820:-] | 0.6588 | 148 | 7 | -14.37 | -0.9304 |
MIMAT0004631 | mmu-miR-29a* | 319651 | Usp37 | gacuUGUGGUUUUCUUU--AGUCa | | ||||||||||| |||| | ggccAAACCAAAAGAAACUUCAGu | 2 | 19 | 117 | 140 | [mm9:1:74485825-74485848:-] | 0.6556 | 130 | 0 | -19.28 | -0.8496 |
MIMAT0000578 | mmu-miR-337-3p | 319651 | Usp37 | uccguaGUAUAUCCUCGACUu | ||| || |||||| | uggucgCAUCUA-UAGCUGAu | 2 | 16 | 176 | 195 | [mm9:1:74485770-74485789:-] | 0.6619 | 121 | 6 | -13.93 | -0.1012 |
MIMAT0002107 | mmu-miR-466a-3p | 319651 | Usp37 | agaAU-ACACACGCACAUACAUau | || ||| : | |||||| | acaUACUGUAAAUAUAUAUGUAca | 3 | 21 | 249 | 272 | [mm9:1:74485693-74485716:-] | 0.6108 | 127 | 0 | -3.42 | -0.3129 |
MIMAT0002109 | mmu-miR-468 | 319651 | Usp37 | gucuGUGUGC-GUGUAGUCAGUAu | || | | || |||||||| | aaacCAAAAGAAACUUCAGUCAUg | 2 | 20 | 121 | 144 | [mm9:1:74485821-74485844:-] | 0.6556 | 154 | 7 | -15.30 | -0.9634 |
MIMAT0003480 | mmu-miR-297b-5p | 319651 | Usp37 | uguacaagUACGUGUGUAUGua | ||| |:|||||| | ucuuaggaAUGAAUACAUACug | 3 | 15 | 235 | 256 | [mm9:1:74485709-74485730:-] | 0.6108 | 138 | 0 | -11.65 | -0.1391 |
MIMAT0004827 | mmu-miR-297b-3p | 319651 | Usp37 | auaccCAUACACACAUACAUau | ||| | | |||||| | auacuGUAAAUAUAUAUGUAca | 3 | 18 | 251 | 272 | [mm9:1:74485693-74485714:-] | 0.6108 | 133 | 0 | -3.33 | -0.3051 |
MIMAT0004864 | mmu-miR-297a* | 319651 | Usp37 | auaccCAUACACACAUACAUau | ||| | | |||||| | auacuGUAAAUAUAUAUGUAca | 3 | 18 | 251 | 272 | [mm9:1:74485693-74485714:-] | 0.6108 | 133 | 0 | -3.33 | -0.3051 |
MIMAT0004865 | mmu-miR-297c | 319651 | Usp37 | uguacaugUACGUGUGUAUGua | ||| |:|||||| | ucuuaggaAUGAAUACAUACug | 3 | 15 | 235 | 256 | [mm9:1:74485709-74485730:-] | 0.6108 | 138 | 0 | -11.65 | -0.1391 |
MIMAT0004866 | mmu-miR-297c* | 319651 | Usp37 | auaccCAUACACACAUACAUau | ||| | | |||||| | auacuGUAAAUAUAUAUGUAca | 3 | 18 | 251 | 272 | [mm9:1:74485693-74485714:-] | 0.6108 | 133 | 0 | -3.33 | -0.3051 |
MIMAT0004876 | mmu-miR-466b-3p | 319651 | Usp37 | agaAU-ACACACGCACAUACAUau | || ||| : | |||||| | acaUACUGUAAAUAUAUAUGUAca | 3 | 21 | 249 | 272 | [mm9:1:74485693-74485716:-] | 0.6108 | 127 | 0 | -3.42 | -0.3129 |
MIMAT0005453 | mmu-miR-466b-3-3p | 319651 | Usp37 | agaAU-ACACACGCACAUACAUaa | || ||| : | |||||| | acaUACUGUAAAUAUAUAUGUAca | 3 | 21 | 249 | 272 | [mm9:1:74485693-74485716:-] | 0.6108 | 127 | 0 | -3.42 | -0.3129 |
MIMAT0004878 | mmu-miR-466c-3p | 319651 | Usp37 | agaAU-ACACACGCACAUACAUau | || ||| : | |||||| | acaUACUGUAAAUAUAUAUGUAca | 3 | 21 | 249 | 272 | [mm9:1:74485693-74485716:-] | 0.6108 | 127 | 0 | -3.42 | -0.3129 |
MIMAT0004880 | mmu-miR-466e-3p | 319651 | Usp37 | agaAU-ACACACGCACAUACAUau | || ||| : | |||||| | acaUACUGUAAAUAUAUAUGUAca | 3 | 21 | 249 | 272 | [mm9:1:74485693-74485716:-] | 0.6108 | 127 | 0 | -3.42 | -0.3129 |
MIMAT0004931 | mmu-miR-466d-3p | 319651 | Usp37 | gauACACACGCACAUACAUau | ||| : | |||||| | uacUGUAAAUAUAUAUGUAca | 3 | 19 | 252 | 272 | [mm9:1:74485693-74485713:-] | 0.6108 | 126 | 0 | -4.77 | -0.3129 |
MIMAT0005854 | mmu-miR-467g | 319651 | Usp37 | uaUAU-ACA--CACACAUACAUau | ||| ||| | | |||||| | acAUACUGUAAAUAUAUAUGUAca | 3 | 20 | 249 | 272 | [mm9:1:74485693-74485716:-] | 0.6108 | 129 | 0 | -4.61 | -0.3103 |
MIMAT0009399 | mmu-miR-1935 | 319651 | Usp37 | ucucuaGGCGGUCGGAGACGGa | ::| |: |||||||| | cccuccUUGACGUCCUCUGCCc | 2 | 17 | 48 | 69 | [mm9:1:74485896-74485917:-] | 0.6556 | 152 | 7 | -20.60 | -0.2754 |
MIMAT0009407 | mmu-miR-1942 | 319651 | Usp37 | guuggucUACUUCUGUA-GACu | ||||| |||| ||| | cuuaggaAUGAAUACAUACUGu | 2 | 15 | 236 | 257 | [mm9:1:74485708-74485729:-] | 0.6108 | 126 | 0 | -12.98 | -1.2401 |
MIMAT0009417 | mmu-miR-1950 | 319651 | Usp37 | acUGGUAUAGGAAUCUACGUCu | ||: || ||| ||||||| | gaACUCUA--CUU-GAUGCAGg | 2 | 21 | 82 | 100 | [mm9:1:74485865-74485883:-] | 0.6556 | 151 | 7 | -15.08 | -0.9299 |
MIMAT0009440 | mmu-miR-1967 | 319651 | Usp37 | cgUAGAAGAGGGGUCCUAGGAGu | |||| : |: | |||||| | gcAUCUAUAGCUGAUUAUCCUCu | 2 | 22 | 181 | 203 | [mm9:1:74485762-74485784:-] | 0.6619 | 125 | 6 | -16.20 | -0.1707 |
MIMAT0009442 | mmu-miR-1969 | 319651 | Usp37 | ugGGUACAAUUUCAGAGGUA-GAa | :||||| || |||||| || | agUCAUGUGCAACGCUCCAUGCUg | 2 | 22 | 138 | 161 | [mm9:1:74485804-74485827:-] | 0.6588 | 133 | 0 | -18.34 | -0.9006 |
MIMAT0012774 | mmu-miR-664 | 319651 | Usp37 | auccgaccccUCAUUUACUUAu | || :||||||| | cuuuugucuuAG-GAAUGAAUa | 2 | 13 | 229 | 249 | [mm9:1:74485716-74485736:-] | 0.6619 | 142 | 7 | -9.30 | -1.0202 |
MIMAT0015640 | mmu-miR-3470a | 319651 | Usp37 | ggucGGACCAGAUGUU-UCACu | ::| ||||||| |||| | ucuuUUUCUUCUACAAGAGUGc | 2 | 18 | 201 | 222 | [mm9:1:74485743-74485764:-] | 0.6619 | 125 | 0 | -13.39 | -0.7005 |
MIMAT0015641 | mmu-miR-3470b | 319651 | Usp37 | ggucGGACCAGAUG-UCUCACu | ::| ||||| |||||| | ucuuUUUCUUCUACAAGAGUGc | 2 | 18 | 201 | 222 | [mm9:1:74485743-74485764:-] | 0.6619 | 125 | 6 | -16.09 | -0.7005 |
MIMAT0000133 | mmu-miR-101a | 319651 | Usp37 | aagucaauagugucAUGACAu | |||||| | uaggaaugaauacaUACUGUa | 2 | 8 | 238 | 258 | [mm9:1:74485707-74485727:-] | 0.6108 | 120 | 6 | -11.96 | -0.3371 |
MIMAT0000135 | mmu-miR-125a-5p | 319651 | Usp37 | aguguccaauuucccaGAGUCCCu | ||||||| | gcaggagcaacaacagCUCAGGGc | 2 | 9 | 96 | 119 | [mm9:1:74485846-74485869:-] | 0.6556 | 140 | 7 | -20.27 | -0.4193 |
MIMAT0000136 | mmu-miR-125b-5p | 319651 | Usp37 | aguguucaaucccaGAGUCCCu | ||||||| | aggagcaacaacagCUCAGGGc | 2 | 9 | 98 | 119 | [mm9:1:74485846-74485867:-] | 0.6556 | 140 | 7 | -14.83 | -0.4257 |
MIMAT0000156 | mmu-miR-144 | 319651 | Usp37 | ucauguagUAGAUAUGACAu | || ||||||| | aggaaugaAUACAUACUGUa | 2 | 13 | 239 | 258 | [mm9:1:74485707-74485726:-] | 0.6108 | 144 | 7 | -10.32 | -1.2439 |
MIMAT0000381 | mmu-miR-34c | 319651 | Usp37 | cgUUAGUCG-AUUGAU-GUGACGGa | || | || : ||: ||||||| | acAAGCUGCACGUCUGUCACUGCCa | 2 | 22 | 23 | 47 | [mm9:1:74485918-74485942:-] | 0.6556 | 147 | 7 | -19.28 | -0.7659 |
MIMAT0000382 | mmu-miR-34b-5p | 319651 | Usp37 | ugUUAGUCGAUUA-AU-GUGACGGa | || | || :| |: ||||||| | acAAGCUGCACGUCUGUCACUGCCa | 2 | 22 | 23 | 47 | [mm9:1:74485918-74485942:-] | 0.6556 | 147 | 7 | -16.83 | -0.7659 |
MIMAT0000533 | mmu-miR-26a | 319651 | Usp37 | ucggauaggaccuaAUGAACUu | ||||||| | agaauugggaacucUACUUGAu | 2 | 9 | 74 | 95 | [mm9:1:74485870-74485891:-] | 0.6556 | 140 | 7 | -11.99 | -0.3342 |
MIMAT0000534 | mmu-miR-26b | 319651 | Usp37 | uggaUAGGACUU-A-AUGAACUu | ||: ||| | ||||||| | gagaAUUGGGAACUCUACUUGAu | 2 | 18 | 73 | 95 | [mm9:1:74485870-74485892:-] | 0.6556 | 147 | 7 | -9.70 | -0.3342 |
MIMAT0000542 | mmu-miR-34a | 319651 | Usp37 | uguugGUCGAUUCUGUGACGGu | || | | ||||||| | agcugCACGUCUGUCACUGCCa | 2 | 18 | 26 | 47 | [mm9:1:74485918-74485939:-] | 0.6556 | 145 | 7 | -19.59 | -0.7623 |
MIMAT0000565 | mmu-miR-328 | 319651 | Usp37 | ugCCUUCCCGUC-UCUCCCGGUc | | || ||| ||||||| | gaGCAACAACAGCUCAGGGCCAa | 2 | 21 | 100 | 122 | [mm9:1:74485843-74485865:-] | 0.6556 | 143 | 7 | -16.65 | -0.8981 |
MIMAT0000609 | mmu-miR-351 | 319651 | Usp37 | guccgaguuucccgagGAGUCCCu | ||||||| | gcaggagcaacaacagCUCAGGGc | 2 | 9 | 96 | 119 | [mm9:1:74485846-74485869:-] | 0.6556 | 140 | 7 | -23.53 | -0.4193 |
MIMAT0000616 | mmu-miR-101b | 319651 | Usp37 | aagucgauagugucAUGACAu | |||||| | uaggaaugaauacaUACUGUa | 2 | 8 | 238 | 258 | [mm9:1:74485707-74485727:-] | 0.6108 | 120 | 6 | -11.83 | -0.3371 |
MIMAT0000656 | mmu-miR-139-5p | 319651 | Usp37 | gacCUCUGUGCACGUGACAUcu | || |:|| | |||||| | aauGA-AUACAU--ACUGUAaa | 3 | 20 | 242 | 260 | [mm9:1:74485705-74485723:-] | 0.6108 | 126 | 0 | -8.74 | -0.3586 |
MIMAT0001542 | mmu-miR-449a | 319651 | Usp37 | uggUCGAU-UGU-UAU-GUGACGGu | ||||: ||: |: ||||||| | acaAGCUGCACGUCUGUCACUGCCa | 2 | 20 | 23 | 47 | [mm9:1:74485918-74485942:-] | 0.6556 | 148 | 7 | -23.18 | -0.7659 |
MIMAT0003172 | mmu-miR-542-3p | 319651 | Usp37 | aaagUCAAUAGU-UAGACAGUGu | || |: || :|||||||| | cacaAGCUG-CACGUCUGUCACu | 2 | 19 | 22 | 43 | [mm9:1:74485922-74485943:-] | 0.6556 | 151 | 7 | -16.00 | -0.3713 |
MIMAT0003460 | mmu-miR-449c | 319651 | Usp37 | ggUCGAUCGU---UAC-GUGACGGa | |||| ||| || ||||||| | caAGCU-GCACGUCUGUCACUGCCa | 2 | 20 | 24 | 47 | [mm9:1:74485918-74485941:-] | 0.6556 | 147 | 7 | -19.61 | -0.7696 |
MIMAT0005447 | mmu-miR-449b | 319651 | Usp37 | cggucgauuguuGUGACGGa | ||||||| | cugcacgucuguCACUGCCa | 2 | 9 | 28 | 47 | [mm9:1:74485918-74485937:-] | 0.6556 | 140 | 7 | -17.38 | -0.7659 |