DNA & RNA Element - AREsite Gene Name Motif CDS Area ARE Area Evidence Trim58; Gm16 ATTTA 4-1461 1771-1775

DNA & RNA Element - microRNA Mirbase Acc miRNA Name Gene ID Gene Symbol miRNA Alignment Alignment Gene Alignment miRNA Start miRNA End Gene Start Gene End Genome Coordinates Conservation Align Score Seed Cat Energy mirSVR Score MIMAT0004523 mmu-miR-29b* 216781 Trim58 auuuggugguauacuUUGGUCg |||||| cuucuaguuuaauauAACCAGa 2 8 663 684 [mm9:11:58465838-58465859:+] 0.5354 120 6 -10.37 -0.1651 MIMAT0004530 mmu-miR-127* 216781 Trim58 uagucucgggagacuCGAAGUc |||||| cuuagaaauaaggauGCUUCAa 2 8 415 436 [mm9:11:58465590-58465611:+] 0.4899 120 6 -11.09 -0.1004 MIMAT0004575 mmu-miR-295* 216781 Trim58 cuuCACACGGGGUGUAA-ACUCa | ||| ::|||||| |||| cccGGGUGGUUCACAUUCUGAGg 2 20 142 164 [mm9:11:58465317-58465339:+] 0.5074 135 0 -20.23 -0.1347 MIMAT0004579 mmu-miR-302a* 216781 Trim58 cguUCAUGUUGGUGCAAAUUca ||| | |:| |||||| cauAGUCCUUCUA-GUUUAAua 3 20 656 676 [mm9:11:58465831-58465851:+] 0.5354 133 0 -6.26 -0.1108 MIMAT0004616 mmu-miR-30c-1* 216781 Trim58 ccucauuuguuggGAGAGGGUc :||||||| ugcacaggagggaUUCUCCCAg 2 10 102 123 [mm9:11:58465277-58465298:+] 0.5074 141 7 -22.85 -0.1207 MIMAT0005438 mmu-miR-30c-2* 216781 Trim58 ucucaUUUGUCGGAAGAGGGUc |:: :| |||||||| ugcacAGGAGGGAUUCUCCCAg 2 18 102 123 [mm9:11:58465277-58465298:+] 0.5074 149 7 -20.42 -0.1195 MIMAT0000569 mmu-miR-330* 216781 Trim58 agagacguccGGGA-CACGAAACg ||:| ||||||| ccuucccccuCCUUAUUGCUUUGu 2 14 610 633 [mm9:11:58465785-58465808:+] 0.5073 144 7 -13.20 -0.7416 MIMAT0004661 mmu-miR-28* 216781 Trim58 aggucgucgaguguuAGAUCAc |||||| ucaaaauaaccuuuuUCUAGUa 2 8 433 454 [mm9:11:58465608-58465629:+] 0.4941 120 6 -8.09 -0.1492 MIMAT0004668 mmu-miR-138* 216781 Trim58 ggGACCACA-ACACUUCAUCGGc || || | || |||||||| uaCUUGUUUCUGACAAGUAGCCa 2 21 328 350 [mm9:11:58465503-58465525:+] 0.4976 159 7 -16.24 -0.8722 MIMAT0002107 mmu-miR-466a-3p 216781 Trim58 agaauacacacgcacaUACAUAu |||||| accagaaucauucugaAUGUAUa 2 8 679 701 [mm9:11:58465854-58465876:+] 0.5354 120 6 -9.06 -0.1004 MIMAT0002108 mmu-miR-467a-1* 216781 Trim58 cacauccacACACAUACAUAUa | || ||||||| cagaaucauUCUGAAUGUAUAu 2 14 681 702 [mm9:11:58465856-58465877:+] 0.5354 149 7 -9.10 -0.9067 MIMAT0003733 mmu-miR-665 216781 Trim58 ucccUGGAGUCGGAGGACCa | |||||:||||||| caauAACUCAGUCUCCUGGg 2 17 370 389 [mm9:11:58465545-58465564:+] 0.5022 168 7 -28.00 -0.1228 MIMAT0003736 mmu-miR-670 216781 Trim58 aagugguGUAUGUGAGUCCCUa ::|:| :||||||| gaagugcUGUGC-UUCAGGGAa 2 16 10 30 [mm9:11:58465185-58465205:+] 0.4940 145 7 -15.47 -0.1866 MIMAT0003737 mmu-miR-666-5p 216781 Trim58 ccgagaGUGUCGACACGGG-CGa |:::||||||||| || gggaggCGUGGCUGUGCCCUGCu 2 17 45 67 [mm9:11:58465220-58465242:+] 0.5007 132 0 -31.74 -0.1227 MIMAT0003740 mmu-miR-674 216781 Trim58 auGUGGUGAGG---GUAGAGUCACg || ||:||: | ||||||| uuCA-CAUUCUGAGGAACUCAGUGg 2 21 151 174 [mm9:11:58465326-58465349:+] 0.5074 145 7 -19.46 -0.1669 MIMAT0004825 mmu-miR-423-5p 216781 Trim58 uuUCAGAGCGAGAGACG-GGGAGu | | |: :||| ||| ||||| uaAAUGUUAUUCU-UGCACCCUCa 2 22 270 292 [mm9:11:58465445-58465467:+] 0.4957 123 0 -20.29 -0.7347 MIMAT0003458 mmu-miR-681 216781 Trim58 ucgacgGACGGUCGCUCCGAc ||||| ||||||| acacuaCUGCC--CGAGGCUu 2 16 210 228 [mm9:11:58465385-58465403:+] 0.5132 152 7 -22.35 -0.1531 MIMAT0003470 mmu-miR-691 216781 Trim58 aaaagacggagagaAGUCCUUa ||||||| guggaguagaugacUCAGGAAa 2 9 171 192 [mm9:11:58465346-58465367:+] 0.5103 140 7 -9.45 -0.3141 MIMAT0003478 mmu-miR-467b* 216781 Trim58 cacaaccacACACAUACAUAUa | || ||||||| cagaaucauUCUGAAUGUAUAu 2 14 681 702 [mm9:11:58465856-58465877:+] 0.5354 149 7 -9.10 -0.9067 MIMAT0003498 mmu-miR-708* 216781 Trim58 gaucUUCGAGUGUC----AGAUCAAc |: ||||:|| ||||||| acuuAGUCUCAUAGUCCUUCUAGUUu 2 19 647 672 [mm9:11:58465822-58465847:+] 0.5354 153 7 -18.21 -0.9868 MIMAT0003498 mmu-miR-708* 216781 Trim58 gaUCUUCGAGUGUCAGAUCAac | || ||: : |||||| aaAUAACCUUUU--UCUAGUaa 3 21 436 455 [mm9:11:58465611-58465630:+] 0.4941 125 0 -5.94 -0.1016 MIMAT0003507 mmu-miR-500 216781 Trim58 acuUGGGAACGGGUCCACGUAa |:::|| ||: ||||||| uucAUUUUUUCCUUGGUGCAUc 2 20 227 248 [mm9:11:58465402-58465423:+] 0.5044 163 7 -17.71 -0.5880 MIMAT0003509 mmu-miR-501-3p 216781 Trim58 guuUAGGAACGGGCCCACGUAa ||::|| ||: ||||||| uucAUUUUUUCCUUGGUGCAUc 2 20 227 248 [mm9:11:58465402-58465423:+] 0.5044 167 7 -18.84 -0.5880 MIMAT0004236 mmu-miR-741 216781 Trim58 agAUGUAUCUUACCGU-AGAGAGu || || || || |||||| agUAAAUUCCAUUUCAUUCUCUCu 2 22 451 474 [mm9:11:58465626-58465649:+] 0.5021 121 6 -9.16 -0.3515 MIMAT0004841 mmu-miR-871 216781 Trim58 guACUGACCGUGAUUAGACUUAu | || | |: | ||||||| uaUAACCAGAAUCAUUCUGAAUg 2 22 675 697 [mm9:11:58465850-58465872:+] 0.5354 153 7 -9.94 -0.7574 MIMAT0004845 mmu-miR-881* 216781 Trim58 ucuacacugacaAUAGAGAGAc | ||||||| cccucuccccccUCUCUCUCUu 2 11 574 595 [mm9:11:58465749-58465770:+] 0.5050 142 7 -8.42 -0.1392 MIMAT0004845 mmu-miR-881* 216781 Trim58 ucUACACUGACAAU-AGAGAGAc || |:| | | ||||||| aaAUUCCAUU-UCAUUCUCUCUc 2 21 454 475 [mm9:11:58465629-58465650:+] 0.5021 141 7 -8.53 -0.5175 MIMAT0004856 mmu-miR-105 216781 Trim58 ugGUGUUCGUAGA--CUCGUGA-ACc :|: ||||:| |||||| || uaUAUUUGCAUUUCCUAGCACUAUGu 2 22 698 723 [mm9:11:58465873-58465898:+] 0.5354 120 0 -15.44 -0.3484 MIMAT0004876 mmu-miR-466b-3p 216781 Trim58 agaauacacacgcacaUACAUAu |||||| accagaaucauucugaAUGUAUa 2 8 679 701 [mm9:11:58465854-58465876:+] 0.5354 120 6 -9.06 -0.1004 MIMAT0005453 mmu-miR-466b-3-3p 216781 Trim58 agaauacacacgcacaUACAUAa |||||| accagaaucauucugaAUGUAUa 2 8 679 701 [mm9:11:58465854-58465876:+] 0.5354 120 6 -6.80 -0.1004 MIMAT0004878 mmu-miR-466c-3p 216781 Trim58 agaauacacacgcacaUACAUAu |||||| accagaaucauucugaAUGUAUa 2 8 679 701 [mm9:11:58465854-58465876:+] 0.5354 120 6 -9.06 -0.1004 MIMAT0004880 mmu-miR-466e-3p 216781 Trim58 agaauacacacgcacaUACAUAu |||||| accagaaucauucugaAUGUAUa 2 8 679 701 [mm9:11:58465854-58465876:+] 0.5354 120 6 -9.06 -0.1004 MIMAT0004887 mmu-miR-467d* 216781 Trim58 cacauccacACACAUACAUAUa | || ||||||| cagaaucauUCUGAAUGUAUAu 2 14 681 702 [mm9:11:58465856-58465877:+] 0.5354 149 7 -9.10 -0.9067 MIMAT0004931 mmu-miR-466d-3p 216781 Trim58 gauacacacgcacaUACAUAu |||||| cagaaucauucugaAUGUAUa 2 8 681 701 [mm9:11:58465856-58465876:+] 0.5354 120 6 -8.19 -0.1004 MIMAT0005294 mmu-miR-467e* 216781 Trim58 uauauccacACACAUACAUAUa | || ||||||| cagaaucauUCUGAAUGUAUAu 2 14 681 702 [mm9:11:58465856-58465877:+] 0.5354 149 7 -9.10 -0.9067 MIMAT0005839 mmu-miR-669f 216781 Trim58 uaugcacacACACAUACAUAUAc | || |||||||| cagaaucauUCUGAAUGUAUAUu 2 15 681 703 [mm9:11:58465856-58465878:+] 0.5354 154 7 -8.50 -0.8957 MIMAT0005860 mmu-miR-1199 216781 Trim58 ggcgcgcuggccCUGAGUCu ||||||| aguggaguagauGACUCAGg 2 9 170 189 [mm9:11:58465345-58465364:+] 0.5103 140 7 -16.44 -0.3264 MIMAT0007873 mmu-miR-1896 216781 Trim58 gaGGAG-UGGGUGGUA-GUCUCUc |||| |||| |||| |||||| acCCUCAACCCUCCAUACAGAGAg 2 21 286 309 [mm9:11:58465461-58465484:+] 0.4957 147 6 -35.15 -0.7932 MIMAT0009392 mmu-miR-1929 216781 Trim58 gagACG-AGAUAU-UUCAGGAUCuu ||: | | |: | |||||| gaaUGUAUAUUUGCAUUUCCUAGca 3 21 693 717 [mm9:11:58465868-58465892:+] 0.5354 122 0 -11.76 -0.1112 MIMAT0009408 mmu-miR-1943 216781 Trim58 agguccacgggucuAGGAGGGAa |||||||| cucucucucuuccuUCCUCCCUc 2 10 585 607 [mm9:11:58465760-58465782:+] 0.5073 145 7 -18.80 -0.4596 MIMAT0009408 mmu-miR-1943 216781 Trim58 agguccacGGGUCUAGGAGGGAa ||| ||||||| cucucccuCCCUCUCCCUCCCUc 2 16 511 533 [mm9:11:58465686-58465708:+] 0.5028 143 7 -20.26 -0.1487 MIMAT0009408 mmu-miR-1943 216781 Trim58 agguccACGGGUCUAGGAGGGAa | |:| ||||||| auuucaUUCUCUCUCCCUCCCUc 2 18 461 483 [mm9:11:58465636-58465658:+] 0.5021 141 7 -18.09 -0.2916 MIMAT0009408 mmu-miR-1943 216781 Trim58 agguccacgggucuaGGAGGGAa ||||||| cucucccucucucucCCUCCCUc 2 9 481 503 [mm9:11:58465656-58465678:+] 0.5065 140 7 -18.09 -0.1715 MIMAT0009408 mmu-miR-1943 216781 Trim58 agguccacgggucuaGGAGGGAa ||||||| cucucccucucucucCCUCCCUc 2 9 501 523 [mm9:11:58465676-58465698:+] 0.5065 140 7 -18.09 -0.1525 MIMAT0009419 mmu-miR-669m 216781 Trim58 uauacaaacACACCUACAUAUa | || ||||||| cagaaucauUCUGAAUGUAUAu 2 14 681 702 [mm9:11:58465856-58465877:+] 0.5354 149 7 -8.80 -0.9000 MIMAT0009425 mmu-miR-1954 216781 Trim58 uuGUCCCAGAGUGAGACGUCa || | || |:||||||| acCAACGCCU-AUUCUGCAGg 2 20 80 99 [mm9:11:58465255-58465274:+] 0.5074 153 7 -15.86 -0.2186 MIMAT0009438 mmu-miR-1965 216781 Trim58 acgcgGUGAUGCCGGG--CCGAa |||||| |||| |||| ucaaaCACUACUGCCCGAGGCUu 2 17 206 228 [mm9:11:58465381-58465403:+] 0.5132 120 0 -23.79 -0.2257 MIMAT0014852 mmu-miR-3072* 216781 Trim58 ggacgggagggagcCCCAGGGa ||||||| ugggacugaugaguGGGUCCCg 2 9 124 145 [mm9:11:58465299-58465320:+] 0.5074 140 7 -18.75 -0.1037 MIMAT0015645 mmu-miR-3473 216781 Trim58 ccgacucGGUAGAGAGGu |: ||||||| ccucuccCUCUCUCUCCc 2 12 480 497 [mm9:11:58465655-58465672:+] 0.5102 143 7 -13.36 -0.1457 MIMAT0015645 mmu-miR-3473 216781 Trim58 ccgacucGGUAGAGAGGu |: ||||||| ccucuccCUCUCUCUCCc 2 12 500 517 [mm9:11:58465675-58465692:+] 0.5065 143 7 -13.36 -0.1192 MIMAT0015645 mmu-miR-3473 216781 Trim58 ccGACUCGGUAGAGAGGu :| | :| ||||||| auUUCAUUC-UCUCUCCc 2 17 461 477 [mm9:11:58465636-58465652:+] 0.5021 142 7 -11.61 -0.3586 MIMAT0000155 mmu-miR-142-3p 216781 Trim58 agGUAUUUC-A-UCCUUUGUGAUGu || |:| | | ||||||||| ggCAGCAGGCUCAUCAAACACUACu 2 22 193 217 [mm9:11:58465368-58465392:+] 0.5132 151 7 -13.63 -0.4341 MIMAT0000164 mmu-miR-154 216781 Trim58 gcUUCCGUUGUGCCUAUUGGAu :| || || ||||||| agGAUGCUUCA-AAAUAACCUu 2 21 425 445 [mm9:11:58465600-58465620:+] 0.4899 142 7 -12.79 -0.8634 MIMAT0000210 mmu-miR-181a 216781 Trim58 ugAGUGGCUGUCGCA--ACUUACAa | ||| : | | | ||||||| uaUAACCAGAAUCAUUCUGAAUGUa 2 22 675 699 [mm9:11:58465850-58465874:+] 0.5354 148 7 -11.28 -0.8565 MIMAT0000214 mmu-miR-185 216781 Trim58 aguccuuGACGGAAAGAGAGGu || ||| ||||||| ccucccuCUCCCUCUCUCUCCc 2 16 476 497 [mm9:11:58465651-58465672:+] 0.5102 159 7 -17.81 -0.1443 MIMAT0000214 mmu-miR-185 216781 Trim58 aguccuuGACGGAAAGAGAGGu || ||| ||||||| ccucccuCUCCCUCUCUCUCCc 2 16 496 517 [mm9:11:58465671-58465692:+] 0.5065 159 7 -17.81 -0.1180 MIMAT0000214 mmu-miR-185 216781 Trim58 aguccuUGACGGAA-AGAGAGGu |:| | || ||||||| aauuccAUUUCAUUCUCUCUCCc 2 17 455 477 [mm9:11:58465630-58465652:+] 0.5021 151 7 -12.84 -0.3783 MIMAT0000236 mmu-miR-203 216781 Trim58 gaucaccaggAUUU---GUAAAGUg |||| ||||||| cuuuuucuagUAAAUUCCAUUUCAu 2 13 443 467 [mm9:11:58465618-58465642:+] 0.5021 143 7 -12.60 -0.6558 MIMAT0004576 mmu-miR-296-3p 216781 Trim58 ccucucGGAGGUGG--GUUGGGAg |:| |||| ||||||| guuauuCUUGCACCCUCAACCCUc 2 17 275 298 [mm9:11:58465450-58465473:+] 0.4957 155 7 -25.26 -0.5144 MIMAT0004576 mmu-miR-296-3p 216781 Trim58 ccucucggaGGUG-GGUUG-GGAg |||| ||||| ||| uucccuaaaCCACACCAACGCCUa 2 14 67 90 [mm9:11:58465242-58465265:+] 0.5074 120 0 -21.75 -0.4790 MIMAT0000567 mmu-miR-329 216781 Trim58 uuuuuccaAUCGAC--CCACACAa |:| || ||||||| cagucuccUGGGUGCAGGUGUGUg 2 15 378 401 [mm9:11:58465553-58465576:+] 0.4940 145 7 -14.60 -0.1640 MIMAT0000673 mmu-miR-181b 216781 Trim58 ugggUGGCUGUCGU--UACUUACAa ||| : | || ||||||| uauaACCAGAAUCAUUCUGAAUGUa 2 20 675 699 [mm9:11:58465850-58465874:+] 0.5354 146 7 -12.15 -0.8565 MIMAT0000674 mmu-miR-181c 216781 Trim58 ugAGUGG-CU--GUCCAACUUACAa | ||| || || ||||||| uaUAACCAGAAUCAUUCUGAAUGUa 2 21 675 699 [mm9:11:58465850-58465874:+] 0.5354 146 7 -10.88 -0.8530 MIMAT0004684 mmu-miR-362-3p 216781 Trim58 acuuAGGAACU-UGUCCACACAa |||| |: :||||||||| agucUCCUGGGUGCAGGUGUGUg 2 19 379 401 [mm9:11:58465554-58465576:+] 0.4940 165 7 -23.73 -0.1609 MIMAT0001076 mmu-miR-384-3p 216781 Trim58 uaaCACU-UGUUAAAGA-UCCUUa |||: || |||| ||||| cggGUGGUUCACAUUCUGAGGAAc 2 20 144 167 [mm9:11:58465319-58465342:+] 0.5074 122 0 -13.61 -0.1357 MIMAT0001095 mmu-miR-370 216781 Trim58 ugguccaaggugggGUCGUCCg ||||||| ugacucaggaaaggCAGCAGGc 2 9 181 202 [mm9:11:58465356-58465377:+] 0.5132 140 7 -21.78 -0.2118 MIMAT0003729 mmu-miR-216b 216781 Trim58 aguguaaacggacgUCUCUAAa ||||||| aacccuccauacagAGAGAUUu 2 9 292 313 [mm9:11:58465467-58465488:+] 0.4957 140 7 -9.42 -0.5408 MIMAT0004324 mmu-miR-181d 216781 Trim58 ugggUGGCUGUUGU--UACUUACAa ||| : | || ||||||| uauaACCAGAAUCAUUCUGAAUGUa 2 20 675 699 [mm9:11:58465850-58465874:+] 0.5354 146 7 -12.86 -0.8565 MIMAT0004847 mmu-miR-882 216781 Trim58 ugauuacgcgauuGAGAGAGGa |||||||| auuccauuucauuCUCUCUCCc 2 10 456 477 [mm9:11:58465631-58465652:+] 0.5021 145 7 -14.97 -0.3813 MIMAT0004847 mmu-miR-882 216781 Trim58 ugauuacgcgauuGAGAGAGGa |||||||| ccucccucucccuCUCUCUCCc 2 10 476 497 [mm9:11:58465651-58465672:+] 0.5102 145 7 -15.22 -0.1443 MIMAT0004847 mmu-miR-882 216781 Trim58 ugauuacgcgauuGAGAGAGGa |||||||| ccucccucucccuCUCUCUCCc 2 10 496 517 [mm9:11:58465671-58465692:+] 0.5065 145 7 -15.22 -0.1180

DNA & RNA Element - TRANSFAC Accession AS Description Species Entrez Pubmed Binding Info G040508 Trim58 Mus musculus 216781

DNA & RNA Element - RepTar Gene Name miRNA Begin End Profile Trim58 mmu-miR-511 beg:179 end:197 pic:3' ACTCACGTCTCGTTTTCCGTA 5'& ||| ||| .||||||| &5' TGACT-CAG---GAAAGGCA- 3' Trim58 mmu-miR-296-3p beg:281 end:299 pic:3' CCTCTCGGAGGTGGGTTGGGAG 5'& || || |.|||||||| &5' -----GCA-CC-CTCAACCCTC 3' Trim58 mmu-miR-370 beg:183 end:203 pic:3' TGGTCCAAGGTGGGGTCGTCCG 5'& .|||| |||||||| &5' -TCAGGAAAGG---CAGCAGGC 3' Trim58 mmu-miR-1943 beg:511 end:533 pic:3' AGGTCCACGGGTCTAGGAGGGAA 5'& ||| ||| ||||||| &5' TCCCT---CCCTCTCCCTCCCT- 3' Trim58 mmu-miR-681 beg:213 end:228 pic:3' TCGACGGACGGTCGCTCCGAC 5'& ||||| ||||||| &5' ------CTGCC--CGAGGCT- 3' Trim58 mmu-miR-665 beg:373 end:389 pic:3' TCCCTGGAGTCGGAGGACCA 5'& |||||.||||||| &5' ------CTCAGTCTCCTGG- 3' Trim58 mmu-miR-1199 beg:173 end:189 pic:3' GGCGCGCTGGCCCTGAGTCT 5'& |. ||. |||||||. &5' --GTA-GAT---GACTCAGG 3' Trim58 mmu-miR-3072star beg:126 end:145 pic:3' GGACGGGAGGGAGC-CCCAGGGA 5'& || . | ||||||| &5' ------CTGATGAGTGGGTCCC- 3' Trim58 mmu-miR-362-3p beg:382 end:401 pic:3' ACTTAGGAA-CTTGTCCACACAA 5'& |||| | .||||||||| &5' ----TCCTGGGTGCAGGTGTGT- 3' Trim58 mmu-miR-329 beg:384 end:401 pic:3' TTTTTCCAATCGACCCACACAA 5'& .||| || ||||||| &5' ----GGGT--GCA-GGTGTGT- 3' Trim58 mghv-miR-M1-8 beg:373 end:393 pic:3' CTGGTTTGGGGGTCACTCACGA 5'& ||. | |.|| ||.|||| &5' -ACTCAGTCTCC--TGGGTGC- 3' Trim58 mmu-miR-106b beg:699 end:720 pic:3' TAGACGTGACA-GTCGTGAAAT 5'& ||.||||.| .|||||| &5' ATTTGCATTTCCTAGCACT--- 3' Trim58 mmu-miR-1188 beg:63 end:84 pic:3' AGGACCGGGTTGGAGTGTGGT 5'& || ||.|| | ||||||| &5' --CTTCCCTAAAC-CACACCA 3' Trim58 mmu-miR-122 beg:140 end:161 pic:3' GTTTGTGGTAA--C-AGTGTGAGGT 5'& ||. | |||||.||. &5' ------CCGGGTGGTTCACATTCT- 3' Trim58 mmu-miR-1224 beg:536 end:559 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| |||||.. |||| | &5' CTCC-CCTCCTTCCCCCTCTC 3' Trim58 mmu-miR-1224 beg:569 end:590 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| .|||||| |||| | &5' CTCCCTCTCCCC---CCTCTC 3' Trim58 mmu-miR-1224 beg:604 end:626 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| |.||||| ||||.|. &5' CTCC-CTTCCCCC-TCCTTAT 3' Trim58 mmu-miR-1224 beg:530 end:552 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||| .|||||| |||| | &5' CTCCTTCTCCCC--TCCTTCC 3' Trim58 mmu-miR-125a-5p beg:19 end:30 pic:3' AGTGTCCAATTTCCCAGAGTCCCT 5'& .||||||| &5' ----------------TTCAGGGA 3' Trim58 mmu-miR-125b-5p beg:10 end:30 pic:3' AGTGTTCAAT-CCCAGAGTCCCT 5'& |||| | | ||||||| &5' ----AAGTGCTGTGCTTCAGGGA 3' Trim58 mmu-miR-138star beg:329 end:350 pic:3' GGGACCACAACACTTCATCGGC 5'& |.|| || |||||||| &5' -CTTGTTTCTGACAAGTAGCC- 3' Trim58 mmu-miR-142-3p beg:196 end:217 pic:3' AGGTATTTCATCC------TTTGTGATGT 5'& ||| ||||||||| &5' ----------AGGCTCATCAAACACTAC- 3' Trim58 mmu-miR-143 beg:215 end:235 pic:3' CTCGATG---TCACGAAGTAGAGT 5'& ||.| || |||||||.|. &5' ---CTGCCCGAG-GCTTCATTTT- 3' Trim58 mmu-miR-145 beg:22 end:48 pic:3' TCCCTA-AGGACCCTTTTGACCTG 5'& ||||| |||||| ..|. ||. &5' AGGGAAGTCCTGGATGGATCGGG- 3' Trim58 mmu-miR-145star beg:170 end:192 pic:3' GTTCTTGTCATAAA-GGTCCTTA 5'& .||..|| || .|||||| &5' --GGAGTAG-ATGACTCAGGAA- 3' Trim58 mmu-miR-154 beg:423 end:445 pic:3' GCTTCCGTTGTGCCTATTGGAT 5'& |.| || || ||||||| &5' -GGATGCTTCAAA-ATAACCT- 3' Trim58 mmu-miR-181b beg:676 end:699 pic:3' TGGGTGG-CTGTCGTT--ACTTACAA 5'& ||| || || ||||||| &5' ----ACCAGAAT-CATTCTGAATGT- 3' Trim58 mmu-miR-181d beg:676 end:699 pic:3' TGGGTGG-CTGTTGTT--ACTTACAA 5'& ||| || || ||||||| &5' ----ACCAGAAT-CATTCTGAATGT- 3' Trim58 mmu-miR-1839-3p beg:122 end:143 pic:3' CGACAACCAT--CTATTCATCCAGA 5'& ||| |||.|||.|||| &5' -----TGGGACTGATGAGTGGGTC- 3' Trim58 mmu-miR-185 beg:480 end:497 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || ||| ||||||| &5' -------CTCCCTCTCTCTCC- 3' Trim58 mmu-miR-185 beg:500 end:517 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || ||| ||||||| &5' -------CTCCCTCTCTCTCC- 3' Trim58 mmu-miR-185 beg:554 end:576 pic:3' AGTCCTTGACGGAAAGAGAGGT 5'& || || || ||||||| &5' TCTCCCTCTCCC--TCTCTCC- 3' Trim58 mmu-miR-185 beg:541 end:562 pic:3' AGTCCTTGACGGAA-----AGAGAGGT 5'& || |||| ||||||| &5' -------CT-CCTTCCCCCTCTCTCC- 3' Trim58 mmu-miR-188-3p beg:92 end:111 pic:3' ACGTTTGGGACGTACACCCTC 5'& |||.. |||||| |||| &5' -GCAGG-CCTGCACA--GGAG 3' Trim58 mmu-miR-1892 beg:467 end:487 pic:3' TAG-GAGGGAGGGCAGGGGTTTA 5'& || ||||||||| ||.|| &5' -TCTCTCCCTCCC-TCTCC---- 3' Trim58 mmu-miR-1892 beg:487 end:507 pic:3' TAG-GAGGGAGGGCAGGGGTTTA 5'& || ||||||||| ||.|| &5' -TCTCTCCCTCCC-TCTCC---- 3' Trim58 mmu-miR-1892 beg:596 end:618 pic:3' TAGGAGGGAGGGC--AGGGGTTTA 5'& |||||||||.| ||||| &5' -TCCTCCCTCTCCCTTCCCC---- 3' Trim58 mmu-miR-1894-3p beg:561 end:583 pic:3' GAGGGA-AGTGGGAGAGGGAACG 5'& |||||| || ||||||||| &5' CTCCCTCTCTCCCTCTCCC---- 3' Trim58 mmu-miR-1894-3p beg:524 end:544 pic:3' GAGGGAAGTGGGAGAGGGAACG 5'& ||||| || ||.|||||| &5' CTCCC-TCTCCTTCTCCC---- 3' Trim58 mmu-miR-1894-3p beg:590 end:614 pic:3' GAGGGAAGT-GGGAGAGGGAACG 5'& ||.||||| ||||||||||| &5' CTTCCTTCCTCCCTCTCCCTT-- 3' Trim58 mmu-miR-1894-3p beg:569 end:593 pic:3' GAGGGA-AGT-GGGAGAGGGAACG 5'& |||||| || |||||||.|| &5' CTCCCTCTCCCCCCTCTCTCT--- 3' Trim58 mmu-miR-18a beg:235 end:251 pic:3' GATAGACGTGATCTACGTGGAAT 5'& || |.||||.||| &5' ---------CTTGGTGCATCTT- 3' Trim58 mmu-miR-1929 beg:16 end:39 pic:3' GAGACGAGATA-TTTCAGGATCTT 5'& | ||||. .|||||||.|| &5' -TGTGCTTCAGGGAAGTCCTGGA- 3' Trim58 mmu-miR-1954 beg:86 end:99 pic:3' TTGTCCCAGAGTGAGACGTCA 5'& .|.||||||| &5' ----------TATTCTGCAG- 3' Trim58 mmu-miR-1956 beg:24 end:40 pic:3' AGGCGACTGAGTCGGGACCTGA 5'& |. ||.||||||. &5' ------GGA--AGTCCTGGAT- 3' Trim58 mmu-miR-1958 beg:222 end:240 pic:3' TGAATGACGAAGGT-GAAAGGAT 5'& ||||| .|||||| &5' -------GCTTCATTTTTTCCT- 3' Trim58 mmu-miR-1967 beg:226 end:253 pic:3' CGTAGAAGAGGGGTC-C-TAGGAGT 5'& |||.||.|||. | | |||.||| &5' -CATTTTTTCCTTGGTGCATCTTCA 3' Trim58 mmu-miR-19a beg:693 end:709 pic:3' AGTCAAAACGTATCTAAACGTGT 5'& ||.||| ||||||. &5' -------TGTATA--TTTGCAT- 3' Trim58 mmu-miR-19b beg:693 end:709 pic:3' AGTCAAAACGTACCTAAACGTGT 5'& ||.|| |||||||. &5' -------TGTAT--ATTTGCAT- 3' Trim58 mmu-miR-2145 beg:51 end:68 pic:3' TTGGTCCGGGCTGGGACGA 5'& |||. .||||||| &5' -----GGCTGTGCCCTGCT 3' Trim58 mmu-miR-2146 beg:437 end:452 pic:3' GTGTACCTTGGGAAGAGGTG 5'& ||||.||.||.| &5' -------AACCTTTTTCTA- 3' Trim58 mmu-miR-22star beg:147 end:169 pic:3' ATTTCGAACGGT-GACTTCTTGA 5'& .|.| | ||||.||||| &5' ---GGTTCACATTCTGAGGAACT 3' Trim58 mmu-miR-3072star beg:550 end:570 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& ||| |.||||||| ||||| &5' CCT-CTCTCCCTC----TCCCT 3' Trim58 mmu-miR-3072star beg:564 end:583 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& ||| |.||||||| |||| &5' CCT-CTCTCCCTC----TCCC- 3' Trim58 mmu-miR-3072star beg:593 end:613 pic:3' GGACGGGAGGGAGCCCCAGGGA 5'& ||| .|||||||| ||||| &5' CCT-TCCTCCCTC----TCCCT 3' Trim58 mmu-miR-3099 beg:576 end:599 pic:3' AGGGGTTGGAGAGAGATCGGAT 5'& ||||| .|||||||| ||| &5' TCCCCCCTCTCTCTCTT-CCT- 3' Trim58 mmu-miR-30c-1star beg:105 end:124 pic:3' CCTCATTTGTTGGGAGAGGGTC 5'& |||| .|||||||| &5' GGAGGGA------TTCTCCCAG 3' Trim58 mmu-miR-30c-2star beg:105 end:124 pic:3' TCTCATTTGTCGGAAGAGGGTC 5'& ..| .| ||||||||| &5' -----GGAGGGA-TTCTCCCAG 3' Trim58 mmu-miR-324-5p beg:372 end:393 pic:3' TGTG-GTTACGGGATCCCCTACGC 5'& || ||.| .|||.|| ||| &5' --ACTCAGTCTCCTGGG---TGC- 3' Trim58 mmu-miR-327 beg:650 end:671 pic:3' TAGGAGTA-CGGGGAGTTCA 5'& .||||| |.||.|| ||| &5' --TCTCATAGTCCTTCTAGT 3' Trim58 mmu-miR-340-5p beg:618 end:635 pic:3' TTAGTCAGAGTAACGAAATATT 5'& ||.||||||||.|. &5' -------CTTATTGCTTTGTG- 3' Trim58 mmu-miR-3473 beg:483 end:497 pic:3' CCGACTCGGT-AGAGAGGT 5'& || ||||||| &5' -------CCTCTCTCTCC- 3' Trim58 mmu-miR-3473 beg:503 end:517 pic:3' CCGACTCGGT-AGAGAGGT 5'& || ||||||| &5' -------CCTCTCTCTCC- 3' Trim58 mmu-miR-3473 beg:549 end:562 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||||||| &5' -------CCCTCTCTCC- 3' Trim58 mmu-miR-3473 beg:563 end:576 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||||||| &5' -------CCCTCTCTCC- 3' Trim58 mmu-miR-3473 beg:580 end:593 pic:3' CCGACTCGGTAGAGAGGT 5'& || ||||||. &5' -------CCCTCTCTCT- 3' Trim58 mmu-miR-3473 beg:627 end:645 pic:3' CCGACTCGGTAGAGAGGT 5'& .|| |. |||||.| &5' --TTGTGTTGTCTCTTC- 3' Trim58 mmu-miR-351 beg:7 end:30 pic:3' GTCCGAGTTTCCCGA---GGAGTCCCT 5'& .||| ||| |.||||||| &5' -------GAAGTGCTGTGCTTCAGGGA 3' Trim58 mmu-miR-374star beg:669 end:682 pic:3' GAGCCTGTTACTATTATGTTGG 5'& |||||.|||| &5' ------------TAATATAACC 3' Trim58 mmu-miR-449b beg:197 end:221 pic:3' CGGTCGA-----TTGTTGTGACGGA 5'& .||| |||| .|||||| &5' ---GGCTCATCAAACACTACTGCC- 3' Trim58 mmu-miR-449c beg:211 end:221 pic:3' GGTCGATCGTTACGTGACGGA 5'& .|||||| &5' -------------TACTGCC- 3' Trim58 mmu-miR-450b-3p beg:383 end:408 pic:3' TACGTACGTTT-TACAAGG-GTTA 5'& || .||||.. .||| || ||| &5' -TGGGTGCAGGTGTGTGCCACAA- 3' Trim58 mmu-miR-483 beg:586 end:609 pic:3' GAGGGAAGAGAA-GAGGGCAGAA 5'& |||.|||| ||| ||||| ||| &5' CTCTCTTC-CTTCCTCCC-TCT- 3' Trim58 mmu-miR-483 beg:480 end:505 pic:3' GAGGGA-AGAGAA-GAGGGCAGAA 5'& |||||| ||||| ||||| ||| &5' CTCCCTCTCTCTCCCTCCC-TCT- 3' Trim58 mmu-miR-483 beg:500 end:525 pic:3' GAGGGA-AGAGAA-GAGGGCAGAA 5'& |||||| ||||| ||||| ||| &5' CTCCCTCTCTCTCCCTCCC-TCT- 3' Trim58 mmu-miR-483 beg:524 end:547 pic:3' GAGGGAAGA-GAAGAGGGCAGAA 5'& ||||| ||| |||||||| || &5' CTCCC-TCTCCTTCTCCCCTC-- 3' Trim58 mmu-miR-484 beg:39 end:63 pic:3' TAGCCCTCC-C-CTGACTCGGACT 5'& ||||||||| | |.||| ||| &5' ATCGGGAGGCGTGGCTGTGCC--- 3' Trim58 mmu-miR-488 beg:179 end:206 pic:3' CTG-GTTCTT--TGTCGGAA-AGTT 5'& ||| ||.||| .|||| ||| &5' GACTCAGGAAAGGCAGCAGGCTCA- 3' Trim58 mmu-miR-500 beg:227 end:248 pic:3' ACTTGGGAACGGGTCCACGTAA 5'& |...|| ||. ||||||| &5' ---ATTTTTTCCTTGGTGCAT- 3' Trim58 mmu-miR-500 beg:377 end:401 pic:3' ACTTGGGAA-CGGGTCCACGTAA 5'& | .||| |. ||||||..| &5' -GTCTCCTGGGTGCAGGTGTGT- 3' Trim58 mmu-miR-501-3p beg:228 end:248 pic:3' GTTTAGGAACGGGCCCACGTAA 5'& ||..|| ||. ||||||| &5' ---ATTTTTTCCTTGGTGCAT- 3' Trim58 mmu-miR-669j beg:384 end:403 pic:3' ACAAACGTACACTCATATACGT 5'& | |||| .||.|.||| &5' -GGGTGCA----GGTGTGTGC- 3' Trim58 mmu-miR-673-3p beg:16 end:39 pic:3' CCACGT-GTCTTGAGTCGGGGCCT 5'& |||| |||.. ||.||.||| &5' -GTGCTTCAGGGA--AGTCCTGGA 3' Trim58 mmu-miR-674 beg:152 end:174 pic:3' ATGTGGTGAGGGTA---GAGTCACG 5'& ||.||. | ||||||| &5' -----CATTCTGAGGAACTCAGTG- 3' Trim58 mmu-miR-679 beg:641 end:664 pic:3' TGGTTCTCAGT-GGAGTGTCAGG 5'& || |.| .||||.||||| &5' -CCTAC--TTAGTCTCATAGTCC 3' Trim58 mmu-miR-683 beg:179 end:202 pic:3' CTCCTGTGTCGAA--TGTCGTCC 5'& ||| ||| .||||||| &5' ---GACTCAGGAAAGGCAGCAGG 3' Trim58 mmu-miR-691 beg:173 end:192 pic:3' AAAAGACGGAGAGA-AGTCCTTA 5'& |. ||||||| &5' ------GTAGATGACTCAGGAA- 3' Trim58 mmu-miR-691 beg:11 end:30 pic:3' AAAAGACGGAGAGAAGTCCTTA 5'& |||. |||||||.| &5' -----TGCTGTGCTTCAGGGA- 3' Trim58 mmu-miR-692 beg:300 end:312 pic:3' CTCACTCCGCGAGTTTCTCTA 5'& ||.|||||| &5' ------------CAGAGAGAT 3' Trim58 mmu-miR-709 beg:594 end:615 pic:3' AGGAGGACGGAGACGGAGG 5'& |.|||| ||||| |||.| &5' -CTTCCTCCCTCTCCCTTC 3' Trim58 mmu-miR-709 beg:550 end:572 pic:3' AGGAG-GACGGAGACGGAGG 5'& |||| || ||||| ||||. &5' -CCTCTCTCCCTCTCCCTCT 3' Trim58 mmu-miR-709 beg:564 end:586 pic:3' AGGAG-GACGGAGACGGAGG 5'& |||| || ||||| || || &5' -CCTCTCTCCCTCTCCCCCC 3' Trim58 mmu-miR-709 beg:637 end:657 pic:3' AGGAGGACGGAGACGGAGG 5'& ||.|||| ||. |.||| &5' TCTTCCTA-CTTAGTCTC- 3' Trim58 mmu-miR-711 beg:134 end:145 pic:3' GAATGTAGAGAGGGGCCCAGGG 5'& .||||||| &5' --------------TGGGTCCC 3' Trim58 mmu-miR-744 beg:47 end:67 pic:3' ACGACAATCGGGATCGGGGCGT 5'& || |.||. | ||||.|| &5' -GCG--TGGCTGT-GCCCTGC- 3' Trim58 mmu-miR-744star beg:184 end:201 pic:3' TCCAACTCCAATCACCGTTGTC 5'& ||| ||||.||| &5' ------AGGAAA--GGCAGCAG 3' Trim58 mmu-miR-759 beg:678 end:694 pic:3' CAGTTTTAACAAACGTGAGACG 5'& ||.||| ||.|||| &5' --CAGAAT------CATTCTG- 3' Trim58 mmu-miR-767 beg:224 end:247 pic:3' ACG-AGTCTGTT-GGTACCACGT 5'& || ||| . || ||||||| &5' -GCTTCATTTTTTCCTTGGTGCA 3' Trim58 mmu-miR-876-5p beg:9 end:35 pic:3' ATCACTAA--GT-GTCTCTTTAGGT 5'& |||| | |||.|||.||| &5' -AGTGCTGTGCTTCAGGGAAGTCC- 3' Trim58 mmu-miR-882 beg:466 end:477 pic:3' TGATTACGCGATTGAGAGAGGA 5'& |||||||| &5' -------------CTCTCTCC- 3' Trim58 mmu-miR-882 beg:486 end:497 pic:3' TGATTACGCGATTGAGAGAGGA 5'& |||||||| &5' -------------CTCTCTCC- 3' Trim58 mmu-miR-882 beg:506 end:517 pic:3' TGATTACGCGATTGAGAGAGGA 5'& |||||||| &5' -------------CTCTCTCC- 3' Trim58 mmu-miR-882 beg:559 end:576 pic:3' TGATTACGCGATTGAGAGAGGA 5'& | || |||||||| &5' -------CTCTCCCTCTCTCC- 3' Trim58 mmu-miR-882 beg:582 end:597 pic:3' TGATTACGCGATTGAGAGAGGA 5'& || ||||||.| &5' ---------CTCTCTCTCTTC- 3' Trim58 mmu-miR-1941-5p beg:465 end:489 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& .|||| || | ||||||| &5' ---TCTCTCTCCCTCCCTCTCCCT 3' Trim58 mmu-miR-1966 beg:466 end:489 pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& |||||||| || |||||| &5' --CTCTCTCCCTC-CCT-CTCCCT- 3' Trim58 mmu-miR-423-5p beg:469 end:490 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| ||| || .||||| &5' ----TCTCCCTCCCTCTCCCTC- 3' Trim58 mmu-miR-1943 beg:475 end:499 pic:3' AGGTCCACGGGTCTAG-GAGGGAA 5'& ||| ||| || |||||| &5' TCCCTCT-CCCTC-TCTCTCCCT- 3' Trim58 mmu-miR-1941-5p beg:477 end:499 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||||| || ||||||| &5' ---CCTCTC--CCTCTCTCTCCCT 3' Trim58 mmu-miR-423-5p beg:479 end:500 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| |||||| .||||| &5' ----TCTCCCTCTCTCTCCCTC- 3' Trim58 mmu-miR-1941-5p beg:483 end:509 pic:3' TTCGGAGACAT--GGTCGTAGAGGGA 5'& ||||| || | ||||||| &5' ---CCTCTCTCTCCCTCCCTCTCCCT 3' Trim58 mmu-miR-1966 beg:486 end:509 pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& |||||||| || |||||| &5' --CTCTCTCCCTC-CCT-CTCCCT- 3' Trim58 mmu-miR-1943 beg:495 end:519 pic:3' AGGTCCACGGGTCTAG-GAGGGAA 5'& ||| ||| || |||||| &5' TCCCTCT-CCCTC-TCTCTCCCT- 3' Trim58 mmu-miR-423-5p beg:499 end:520 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| |||||| .||||| &5' ----TCTCCCTCTCTCTCCCTC- 3' Trim58 mmu-miR-1941-5p beg:503 end:529 pic:3' TTCGGAGACAT--GGTCGTAGAGGGA 5'& ||||| || | ||||||| &5' ---CCTCTCTCTCCCTCCCTCTCCCT 3' Trim58 mmu-miR-1966 beg:506 end:529 pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& |||||||| || |||||| &5' --CTCTCTCCCTC-CCT-CTCCCT- 3' Trim58 mmu-miR-1943 beg:540 end:564 pic:3' AGGTCCACGGGTCTAG-GAGGGAA 5'& || ||| || |||||| &5' -CCTCCTTCCCCC-TCTCTCCCT- 3' Trim58 mmu-miR-1941-5p beg:550 end:570 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||||| || ||||||| &5' ---CCTCTCT-CCC---TCTCCCT 3' Trim58 mmu-miR-1966 beg:551 end:577 pic:3' CTGAGAGAGGACTC-GGTC-GAGGGAA 5'& |||||||| || |||||| &5' --CTCTCTCCCTCTCCCTCTCTCCCT- 3' Trim58 mmu-miR-423-5p beg:560 end:581 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| |||||| ||.||| &5' ----TCTCCCTCTCTCCCTCTC- 3' Trim58 mmu-miR-1966 beg:565 end:591 pic:3' CTGAGAGAGGACTC-GGTCGAGGGAA 5'& |||||||| || |||.|| &5' --CTCTCTCCCTCTCCCCCCTCTCT- 3' Trim58 mmu-miR-423-5p beg:568 end:588 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& |||| ||||| |||||| &5' ----TCTCCCTCTCC-CCCCTC- 3' Trim58 mmu-miR-423-5p beg:582 end:601 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||| |||||| .||.|| &5' -----CTCTCTCTCT-TCCTTC- 3' Trim58 mmu-miR-1966 beg:586 end:614 pic:3' CTGAGAG-AGGACTC-GGTCGAGGGAA 5'& ||||| |||| || ||||||| &5' --CTCTCTTCCTTCCTCCCTCTCCCTT 3' Trim58 mmu-miR-1941-5p beg:587 end:613 pic:3' TTCGGAGACAT--GGTCGTAGAGGGA 5'& .|||| || | ||||||| &5' ---TCTCTTCCTTCCTCCCTCTCCCT 3' Trim58 mmu-miR-423-5p beg:598 end:621 pic:3' TTTCAGAGCGAGAGAC---GGGGAGT 5'& ||| ||||| |||||| &5' -----CTCCCTCTCCCTTCCCCCTC- 3' Trim58 mmu-miR-1966 beg:602 end:624 pic:3' CTGAGAGAGGACTCGGTCGAGGGAA 5'& ||||| ||| || ||||.| &5' --CTCTC-CCTT--CCCCCTCCTT- 3' Trim58 mmu-miR-1941-5p beg:625 end:647 pic:3' TTCGGAGACATGGTCGTAGAGGGA 5'& ||.|||. |. |||.||| &5' ----CTTTGTGTT-GTCTCTTCCT 3' Trim58 mmu-miR-1224 beg:636 end:659 pic:3' GAGGTGGAGGGGTCAGGAGTG 5'& |||. ||| |..||| ||||. &5' CTCTTCCTACTTAGT-CTCAT 3' Trim58 mmu-miR-483 beg:638 end:663 pic:3' GAGGGAAGAGA-AGAGGG-CAGAA 5'& ||.||| ||. |||| ||| &5' CTTCCTACTTAGTCTCATAGTC-- 3' Trim58 mmu-miR-3099 beg:639 end:663 pic:3' AGGGGTTGGAG-AGAG-ATCGGAT 5'& |.||. ||.| |||| |||.| &5' TTCCT-ACTTAGTCTCATAGTC-- 3' Trim58 mmu-miR-423-5p beg:514 end:534 pic:3' TTTCAGAGCGAGAGACGGGGAGT 5'& ||| ||||| .||||| &5' -----CTCCCTCTCCCTCCCTC- 3'

DNA & RNA Element - RAID2 Gene Name RAID ID Interactor 1 Category 1 ID 1 Interactor 2 Category 2 ID 2 Methods Score Trim58 RAID00040173 mmu-miR-6965-5p miRNA MIMAT0027830 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00192617 mmu-miR-7235-5p miRNA MIMAT0028438 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00398979 mmu-miR-1843a-5p miRNA MIMAT0014805 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00483891 mmu-miR-7a-2-3p miRNA MIMAT0017070 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00493089 mmu-miR-7118-5p miRNA MIMAT0028133 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00551140 mmu-miR-181c-5p miRNA MIMAT0000674 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00734981 mmu-miR-6971-5p miRNA MIMAT0027844 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID00764729 mmu-miR-216b-5p miRNA MIMAT0003729 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01084639 mmu-miR-7072-5p miRNA MIMAT0028050 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01129467 mmu-miR-3103-5p miRNA MIMAT0014937 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01161304 mmu-miR-181a-5p miRNA MIMAT0000210 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01280609 mmu-miR-362-3p miRNA MIMAT0004684 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01492467 mmu-miR-384-3p miRNA MIMAT0001076 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01562419 mmu-miR-149-3p miRNA MIMAT0016990 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01568327 mmu-miR-330-3p miRNA MIMAT0000569 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01572797 mmu-miR-181b-5p miRNA MIMAT0000673 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01717983 mmu-miR-185-5p miRNA MIMAT0000214 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01817853 mmu-miR-6929-5p miRNA MIMAT0027758 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01831740 mmu-miR-501-3p miRNA MIMAT0003509 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID01894192 mmu-miR-504-3p miRNA MIMAT0017277 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02060511 mmu-miR-882 miRNA MIMAT0004847 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02078529 mmu-miR-5627-5p miRNA MIMAT0022385 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02150005 mmu-miR-181d-5p miRNA MIMAT0004324 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02368924 mmu-miR-142a-3p miRNA MIMAT0000155 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02577523 mmu-miR-296-3p miRNA MIMAT0004576 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02641608 mmu-miR-6240 miRNA MIMAT0024861 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID02771195 mmu-miR-3062-5p miRNA MIMAT0014830 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03056231 mmu-miR-154-5p miRNA MIMAT0000164 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03144047 mmu-miR-1943-5p miRNA MIMAT0009408 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03161222 mmu-miR-7047-5p miRNA MIMAT0027998 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03260864 mmu-miR-370-3p miRNA MIMAT0001095 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03280248 mmu-miR-7216-3p miRNA MIMAT0028401 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03287346 mmu-miR-7016-5p miRNA MIMAT0027936 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03399107 mmu-miR-500-3p miRNA MIMAT0003507 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03445443 mmu-miR-329-3p miRNA MIMAT0000567 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03750410 mmu-miR-6967-5p miRNA MIMAT0027836 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03794899 mmu-miR-7b-3p miRNA MIMAT0017071 Trim58 mRNA 216781 Prediction 0.1828 Trim58 RAID03864983 mmu-miR-203-3p miRNA MIMAT0000236 Trim58 mRNA 216781 Prediction 0.1828